Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021229
(752 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical pr... 126 1e-29
AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein. 126 1e-29
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 0.099
Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical pr... 32 0.38
AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical... 32 0.38
AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical... 32 0.38
Z46934-9|CAD18881.1| 204|Caenorhabditis elegans Hypothetical pr... 31 0.66
AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical... 31 1.2
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 30 1.5
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 30 1.5
Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 29 2.7
AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like se... 29 2.7
AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical... 29 2.7
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 4.7
U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily as... 29 4.7
U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily ass... 29 4.7
U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily ass... 29 4.7
U41030-4|AAA82364.1| 547|Caenorhabditis elegans Hypothetical pr... 29 4.7
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 6.2
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical pr... 28 8.2
U88167-7|AAB42229.1| 378|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical
protein C47E8.7 protein.
Length = 720
Score = 126 bits (305), Expect = 1e-29
Identities = 51/87 (58%), Positives = 68/87 (78%)
Frame = +2
Query: 248 VQEDWSDHALWWPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKI 427
V+ DWSDHALWWP + +WL + TLDQ G+ A+ L FTPMHK RIQLPD++ ID ++
Sbjct: 51 VERDWSDHALWWPEKRRWLQHTRSTLDQNGITAETQLEFTPMHKEARIQLPDMQMIDARV 110
Query: 428 DFSIDTFSAVIQLCKNLGIRHSEELSL 508
DFS+++F A +LC++LGIR+SEELSL
Sbjct: 111 DFSVNSFKATKKLCRDLGIRYSEELSL 137
Score = 47.6 bits (108), Expect = 9e-06
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +3
Query: 102 LADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTE--SFGKEFKKIGRTMP 275
L +G + DG W L I VTDLN +R++ V G++++GG+ML+L +++ P
Sbjct: 4 LVEGTSIIDGKWQLPILVTDLNIQRSISVLGNLNVGGLMLELVSECDVERDWSDHALWWP 63
Query: 276 SGGR--LETNGSPDQN--TPWTSTEFT 344
R T + DQN T T EFT
Sbjct: 64 EKRRWLQHTRSTLDQNGITAETQLEFT 90
>AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein.
Length = 720
Score = 126 bits (305), Expect = 1e-29
Identities = 51/87 (58%), Positives = 68/87 (78%)
Frame = +2
Query: 248 VQEDWSDHALWWPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKI 427
V+ DWSDHALWWP + +WL + TLDQ G+ A+ L FTPMHK RIQLPD++ ID ++
Sbjct: 51 VERDWSDHALWWPEKRRWLQHTRSTLDQNGITAETQLEFTPMHKEARIQLPDMQMIDARV 110
Query: 428 DFSIDTFSAVIQLCKNLGIRHSEELSL 508
DFS+++F A +LC++LGIR+SEELSL
Sbjct: 111 DFSVNSFKATKKLCRDLGIRYSEELSL 137
Score = 47.6 bits (108), Expect = 9e-06
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +3
Query: 102 LADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTE--SFGKEFKKIGRTMP 275
L +G + DG W L I VTDLN +R++ V G++++GG+ML+L +++ P
Sbjct: 4 LVEGTSIIDGKWQLPILVTDLNIQRSISVLGNLNVGGLMLELVSECDVERDWSDHALWWP 63
Query: 276 SGGR--LETNGSPDQN--TPWTSTEFT 344
R T + DQN T T EFT
Sbjct: 64 EKRRWLQHTRSTLDQNGITAETQLEFT 90
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect(2) = 0.099
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +1
Query: 547 QNLKEAKRIKNTQAPDTNTFIAATRGSSNSLD--RSNGPCPATPPPP 681
+N + + + +TN I A S+S RS+ P P PPPP
Sbjct: 1298 KNSSKKRNNRRGNRRNTNEHIQANHEDSDSFSTSRSSSPSPPPPPPP 1344
Score = 24.2 bits (50), Expect(2) = 0.099
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +1
Query: 655 PCPATPPPPRSLSATP 702
P P PPPP ++S P
Sbjct: 1354 PVPPPPPPPPTMSKAP 1369
>Z81544-3|CAB04435.1| 255|Caenorhabditis elegans Hypothetical
protein F49C5.7 protein.
Length = 255
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 562 AKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGT 726
A+R+K T P T+T A + ++ + ++ ATP P + S TP A T
Sbjct: 25 ARRLKTTIQPSTST-TATSSSATETTSNTDSSSTATPSPSSASSTTPTAQSSTAT 78
>Z82078-9|CAE11308.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 580 TQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGTLRR 735
T P + F+ + + RS+ P + PPR L TP++ Q L R
Sbjct: 106 TPEPADDEFVTPSTSKKSQKPRSSDATPVSSKPPRYLPRTPLSEQYTSCLSR 157
>Z82078-8|CAB04948.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 580 TQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGTLRR 735
T P + F+ + + RS+ P + PPR L TP++ Q L R
Sbjct: 104 TPEPADDEFVTPSTSKKSQKPRSSDATPVSSKPPRYLPRTPLSEQYTSCLSR 155
>AL023844-13|CAE11312.1| 949|Caenorhabditis elegans Hypothetical
protein Y48A6B.11b protein.
Length = 949
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 580 TQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGTLRR 735
T P + F+ + + RS+ P + PPR L TP++ Q L R
Sbjct: 106 TPEPADDEFVTPSTSKKSQKPRSSDATPVSSKPPRYLPRTPLSEQYTSCLSR 157
>AL023844-12|CAA19535.2| 947|Caenorhabditis elegans Hypothetical
protein Y48A6B.11a protein.
Length = 947
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 580 TQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGTLRR 735
T P + F+ + + RS+ P + PPR L TP++ Q L R
Sbjct: 104 TPEPADDEFVTPSTSKKSQKPRSSDATPVSSKPPRYLPRTPLSEQYTSCLSR 155
>Z46934-9|CAD18881.1| 204|Caenorhabditis elegans Hypothetical
protein ZK1320.11 protein.
Length = 204
Score = 31.5 bits (68), Expect = 0.66
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 502 IAGYPLEASHLKQNYQN-LKEAKRIKNTQAPDTNTFIAATRGSSN 633
+ G+ EA+H ++N++ + EA+ N PD + F RG+++
Sbjct: 32 LEGWQTEAAHEEENFEKFITEAREFSNMSPPDIDQFEIKARGAAS 76
>AF038608-17|AAC25822.2| 425|Caenorhabditis elegans Hypothetical
protein C09G12.9 protein.
Length = 425
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 589 PDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGTLR 732
P + + G+S S+ P P P PP + T V+S GT++
Sbjct: 213 PQSTPYPMGASGASPYPSASSNPAPPPPRPPPVTAQTSVSSSSGGTIQ 260
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 577 NTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQ 717
++Q P FI + G+S S + + P P PPPP PV ++
Sbjct: 58 SSQDPPGIGFIEVSPGTSMSPPQRHAPPPPRPPPPAGWKQHPVIPER 104
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 577 NTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQ 717
++Q P FI + G+S S + + P P PPPP PV ++
Sbjct: 58 SSQDPPGIGFIEVSPGTSMSPPQRHAPPPPRPPPPAGWKQHPVIPER 104
>Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical protein
R09E10.5 protein.
Length = 1459
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +1
Query: 547 QNLKEAKRIKNTQAPDTNTFIAATRGSSNSL-----DRSNGPCPATPPPPRSLSATPVAS 711
+ L+E++ T A N F T + S D S P PPPR +ATP+
Sbjct: 1375 KKLQESRNYSGTAAYSNNAFQNQTYETKPSRALSVGDLSTAPRTVAMPPPRGTTATPMTL 1434
Query: 712 QQNG 723
+ G
Sbjct: 1435 EPRG 1438
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +1
Query: 556 KEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVAS 711
+ A T P T + T +S + R+ P + P PPR A P A+
Sbjct: 284 RNAAPAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAAN 335
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +1
Query: 556 KEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVAS 711
+ A T P T + T +S + R+ P + P PPR A P A+
Sbjct: 284 RNAAPAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAAN 335
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +1
Query: 556 KEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVAS 711
+ A T P T + T +S + R+ P + P PPR A P A+
Sbjct: 284 RNAAPAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAAN 335
>AY741200-1|AAU89102.1| 596|Caenorhabditis elegans STE20-like
serine/threonine kinase protein.
Length = 596
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +1
Query: 523 ASHLKQNYQNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATP 702
A+H N + T NT ++ GS+++L S P PPPP+ S
Sbjct: 23 AAHSAANASTITSEYSTTQTTTGTFNTDTLSSIGSTSTLHGSQPSQPPPPPPPQVSSPIA 82
Query: 703 VASQQNGTL 729
A+ + L
Sbjct: 83 AAAAASAAL 91
>AL132898-15|CAC14417.2| 596|Caenorhabditis elegans Hypothetical
protein Y59A8B.23 protein.
Length = 596
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +1
Query: 523 ASHLKQNYQNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATP 702
A+H N + T NT ++ GS+++L S P PPPP+ S
Sbjct: 23 AAHSAANASTITSEYSTTQTTTGTFNTDTLSSIGSTSTLHGSQPSQPPPPPPPQVSSPIA 82
Query: 703 VASQQNGTL 729
A+ + L
Sbjct: 83 AAAAASAAL 91
>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 99 MLADGEIVGDGSWNLTIYVTDLNEK 173
+ A G ++GD S NLTI+ T+++ K
Sbjct: 1244 LTASGHVLGDSSTNLTIHSTNIHSK 1268
>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 99 MLADGEIVGDGSWNLTIYVTDLNEK 173
+ A G ++GD S NLTI+ T+++ K
Sbjct: 1244 LTASGHVLGDSSTNLTIHSTNIHSK 1268
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 303 SPDQNTPWTSTEFTRTPPYTSRPCTNH 383
S ++ W+ + R PP SRPC H
Sbjct: 147 STGKSVQWSQCDARRRPPEKSRPCNQH 173
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 303 SPDQNTPWTSTEFTRTPPYTSRPCTNH 383
S ++ W+ + R PP SRPC H
Sbjct: 481 STGKSVQWSQCDARRRPPEKSRPCNQH 507
>U80450-11|AAM15595.1| 664|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform d protein.
Length = 664
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 556 KEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGT 726
+E +R++NT++P G R G P PPPR SA+PV S GT
Sbjct: 420 REEERLRNTRSP---------YGEERWRGRMRGKPPT--PPPRESSASPVNSLPRGT 465
>U80450-9|AAK77615.1| 1112|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform a protein.
Length = 1112
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 556 KEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGT 726
+E +R++NT++P G R G P PPPR SA+PV S GT
Sbjct: 420 REEERLRNTRSP---------YGEERWRGRMRGKPPT--PPPRESSASPVNSLPRGT 465
>U80450-8|AAK77616.1| 949|Caenorhabditis elegans Temporarily
assigned gene nameprotein 163, isoform c protein.
Length = 949
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +1
Query: 556 KEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGT 726
+E +R++NT++P G R G P PPPR SA+PV S GT
Sbjct: 420 REEERLRNTRSP---------YGEERWRGRMRGKPPT--PPPRESSASPVNSLPRGT 465
>U41030-4|AAA82364.1| 547|Caenorhabditis elegans Hypothetical
protein C44C1.4a protein.
Length = 547
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 117 IVGDGSWNLTIYVTDLNEKRTMVVKGD-MHIGGVMLKLTESFGKEFKKIGR 266
IVG ++ YV LNEKR G + + G + T+SF +EF + +
Sbjct: 491 IVGGATYEEAAYVRSLNEKRMQGYGGPAVVLAGSSMLNTKSFLEEFANVDK 541
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 544 YQNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRS 687
++ LK K + N ++ + + + GSS++ + NG PA PP S
Sbjct: 37 HKGLKLKKTVTNDRSAPSVGKVVGSSGSSSNGNSGNGNGPAAKPPQMS 84
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 544 YQNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRS 687
++ LK K + N ++ + + + GSS++ + NG PA PP S
Sbjct: 37 HKGLKLKKTVTNDRSAPSVGKVVGSSGSSSNGNSGNGNGPAAKPPQMS 84
>Z67754-2|CAA91752.2| 677|Caenorhabditis elegans Hypothetical
protein C34E11.2 protein.
Length = 677
Score = 27.9 bits (59), Expect = 8.2
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Frame = +1
Query: 517 LEASHLKQNYQNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRSN-GPCPA-TP----PP 678
L LK+ + ++EA + P TN A + +L R + PA TP P
Sbjct: 396 LARDELKETSE-IREANAVSEDDEPPTNPPSPAPTVNVPTLPRKDYNQSPAHTPEHVCPL 454
Query: 679 PRSLSATPVASQQNGTL 729
PRS S+TP A Q TL
Sbjct: 455 PRSFSSTPAAEQFLPTL 471
>U88167-7|AAB42229.1| 378|Caenorhabditis elegans Hypothetical
protein D2092.2 protein.
Length = 378
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +1
Query: 547 QNLKEAKRIKNTQAPDTNTFIAATRGSSNSLDRSNGPCPATPPPPRSLSATPVASQQNGT 726
Q A R+ +T +PD +F+ T S + S+ P ++P +A+PV+S ++
Sbjct: 271 QKSMPAPRV-STASPDPPSFVLPTARSPINTSPSSSPKASSPKASSPKAASPVSSPKSPV 329
Query: 727 LR 732
++
Sbjct: 330 IQ 331
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,241,837
Number of Sequences: 27780
Number of extensions: 337613
Number of successful extensions: 1637
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1619
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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