Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021228
(725 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X51730-1|CAA36018.1| 933|Homo sapiens protein ( Human mRNA and ... 31 3.2
M15716-1|AAA60081.1| 933|Homo sapiens progesterone receptor pro... 31 3.2
AY525610-1|AAS00096.1| 933|Homo sapiens progesterone receptor p... 31 3.2
AF016381-1|AAD01587.1| 933|Homo sapiens progesterone receptor p... 31 3.2
AB085845-1|BAC11013.1| 803|Homo sapiens delta 6/2 progesterone ... 31 3.2
AB085844-1|BAC11012.1| 690|Homo sapiens delta4+6/2 progesterone... 31 3.2
AB085843-1|BAC11011.1| 764|Homo sapiens delta 3+6/2 progesteron... 31 3.2
AB085683-1|BAC06585.1| 695|Homo sapiens Progesterone receptor p... 31 3.2
AB084248-1|BAB91074.1| 831|Homo sapiens delta 4 progesterone re... 31 3.2
BX005460-3|CAM26149.1| 410|Homo sapiens solute carrier family 4... 30 7.3
BX005460-2|CAM26148.1| 710|Homo sapiens solute carrier family 4... 30 7.3
BC014659-1|AAH14659.1| 709|Homo sapiens solute carrier family 4... 30 7.3
BA000025-5|BAB63296.1| 712|Homo sapiens NG22 protein. 30 7.3
AL844853-2|CAI41851.1| 710|Homo sapiens chromosome 6 open readi... 30 7.3
AL671762-11|CAI18222.2| 410|Homo sapiens solute carrier family ... 30 7.3
AL671762-10|CAI18223.2| 710|Homo sapiens solute carrier family ... 30 7.3
AL662834-22|CAM24990.1| 410|Homo sapiens solute carrier family ... 30 7.3
AL662834-21|CAI17744.1| 710|Homo sapiens solute carrier family ... 30 7.3
AK222998-1|BAD96718.1| 710|Homo sapiens NG22 protein variant pr... 30 7.3
AK027397-1|BAB55083.1| 710|Homo sapiens protein ( Homo sapiens ... 30 7.3
AF134726-4|AAD21813.1| 712|Homo sapiens NG22 protein. 30 7.3
AY184222-1|AAN85434.1| 1873|Homo sapiens DEC-205/DCL-1 fusion pr... 30 9.7
AK000599-1|BAA91280.1| 354|Homo sapiens protein ( Homo sapiens ... 30 9.7
>X51730-1|CAA36018.1| 933|Homo sapiens protein ( Human mRNA and
promoter DNA for progesterone receptor. ).
Length = 933
Score = 31.5 bits (68), Expect = 3.2
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 349 PVRQPKLKVPHRPGELIVHKAEDSFHVAAGQSSGIFSTC--QRATRAKPC*GPKA--HCP 182
P P P RPGE V A S V++ SSG C +A A P GP A C
Sbjct: 422 PPPLPPRATPSRPGEAAVTAAPASASVSSASSSGSTLECILYKAEGAPPQQGPFAPPPCK 481
Query: 181 N*GKTNGIPPRIALLPSKTA 122
G + + PR LPS +A
Sbjct: 482 APGASGCLLPRDG-LPSTSA 500
>M15716-1|AAA60081.1| 933|Homo sapiens progesterone receptor
protein.
Length = 933
Score = 31.5 bits (68), Expect = 3.2
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 349 PVRQPKLKVPHRPGELIVHKAEDSFHVAAGQSSGIFSTC--QRATRAKPC*GPKA--HCP 182
P P P RPGE V A S V++ SSG C +A A P GP A C
Sbjct: 422 PPPLPPRATPSRPGEAAVTAAPASASVSSASSSGSTLECILYKAEGAPPQQGPFAPPPCK 481
Query: 181 N*GKTNGIPPRIALLPSKTA 122
G + + PR LPS +A
Sbjct: 482 APGASGCLLPRDG-LPSTSA 500
>AY525610-1|AAS00096.1| 933|Homo sapiens progesterone receptor
protein.
Length = 933
Score = 31.5 bits (68), Expect = 3.2
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 349 PVRQPKLKVPHRPGELIVHKAEDSFHVAAGQSSGIFSTC--QRATRAKPC*GPKA--HCP 182
P P P RPGE V A S V++ SSG C +A A P GP A C
Sbjct: 422 PPPLPPRATPSRPGEAAVTAAPASASVSSASSSGSTLECILYKAEGAPPQQGPFAPPPCK 481
Query: 181 N*GKTNGIPPRIALLPSKTA 122
G + + PR LPS +A
Sbjct: 482 APGASGCLLPRDG-LPSTSA 500
>AF016381-1|AAD01587.1| 933|Homo sapiens progesterone receptor
protein.
Length = 933
Score = 31.5 bits (68), Expect = 3.2
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 349 PVRQPKLKVPHRPGELIVHKAEDSFHVAAGQSSGIFSTC--QRATRAKPC*GPKA--HCP 182
P P P RPGE V A S V++ SSG C +A A P GP A C
Sbjct: 422 PPPLPPRATPSRPGEAAVTAAPASASVSSASSSGSTLECILYKAEGAPPQQGPFAPPPCK 481
Query: 181 N*GKTNGIPPRIALLPSKTA 122
G + + PR LPS +A
Sbjct: 482 APGASGCLLPRDG-LPSTSA 500
>AB085845-1|BAC11013.1| 803|Homo sapiens delta 6/2 progesterone
receptor protein.
Length = 803
Score = 31.5 bits (68), Expect = 3.2
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 349 PVRQPKLKVPHRPGELIVHKAEDSFHVAAGQSSGIFSTC--QRATRAKPC*GPKA--HCP 182
P P P RPGE V A S V++ SSG C +A A P GP A C
Sbjct: 422 PPPLPPRATPSRPGEAAVTAAPASASVSSASSSGSTLECILYKAEGAPPQQGPFAPPPCK 481
Query: 181 N*GKTNGIPPRIALLPSKTA 122
G + + PR LPS +A
Sbjct: 482 APGASGCLLPRDG-LPSTSA 500
>AB085844-1|BAC11012.1| 690|Homo sapiens delta4+6/2 progesterone
receptor protein.
Length = 690
Score = 31.5 bits (68), Expect = 3.2
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 349 PVRQPKLKVPHRPGELIVHKAEDSFHVAAGQSSGIFSTC--QRATRAKPC*GPKA--HCP 182
P P P RPGE V A S V++ SSG C +A A P GP A C
Sbjct: 422 PPPLPPRATPSRPGEAAVTAAPASASVSSASSSGSTLECILYKAEGAPPQQGPFAPPPCK 481
Query: 181 N*GKTNGIPPRIALLPSKTA 122
G + + PR LPS +A
Sbjct: 482 APGASGCLLPRDG-LPSTSA 500
>AB085843-1|BAC11011.1| 764|Homo sapiens delta 3+6/2 progesterone
receptor protein.
Length = 764
Score = 31.5 bits (68), Expect = 3.2
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 349 PVRQPKLKVPHRPGELIVHKAEDSFHVAAGQSSGIFSTC--QRATRAKPC*GPKA--HCP 182
P P P RPGE V A S V++ SSG C +A A P GP A C
Sbjct: 422 PPPLPPRATPSRPGEAAVTAAPASASVSSASSSGSTLECILYKAEGAPPQQGPFAPPPCK 481
Query: 181 N*GKTNGIPPRIALLPSKTA 122
G + + PR LPS +A
Sbjct: 482 APGASGCLLPRDG-LPSTSA 500
>AB085683-1|BAC06585.1| 695|Homo sapiens Progesterone receptor
protein.
Length = 695
Score = 31.5 bits (68), Expect = 3.2
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 349 PVRQPKLKVPHRPGELIVHKAEDSFHVAAGQSSGIFSTC--QRATRAKPC*GPKA--HCP 182
P P P RPGE V A S V++ SSG C +A A P GP A C
Sbjct: 422 PPPLPPRATPSRPGEAAVTAAPASASVSSASSSGSTLECILYKAEGAPPQQGPFAPPPCK 481
Query: 181 N*GKTNGIPPRIALLPSKTA 122
G + + PR LPS +A
Sbjct: 482 APGASGCLLPRDG-LPSTSA 500
>AB084248-1|BAB91074.1| 831|Homo sapiens delta 4 progesterone
receptor protein.
Length = 831
Score = 31.5 bits (68), Expect = 3.2
Identities = 29/80 (36%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 349 PVRQPKLKVPHRPGELIVHKAEDSFHVAAGQSSGIFSTC--QRATRAKPC*GPKA--HCP 182
P P P RPGE V A S V++ SSG C +A A P GP A C
Sbjct: 422 PPPLPPRATPSRPGEAAVTAAPASASVSSASSSGSTLECILYKAEGAPPQQGPFAPPPCK 481
Query: 181 N*GKTNGIPPRIALLPSKTA 122
G + + PR LPS +A
Sbjct: 482 APGASGCLLPRDG-LPSTSA 500
>BX005460-3|CAM26149.1| 410|Homo sapiens solute carrier family 44
member 4 protein.
Length = 410
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 635 IFRPLTTFVMMCSCIVFW*MRSVHSPT 555
+F PL TFV++ CI +W M +++ T
Sbjct: 238 MFYPLVTFVLLLICIAYWAMTALYLAT 264
>BX005460-2|CAM26148.1| 710|Homo sapiens solute carrier family 44
member 4 protein.
Length = 710
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 635 IFRPLTTFVMMCSCIVFW*MRSVHSPT 555
+F PL TFV++ CI +W M +++ T
Sbjct: 355 MFYPLVTFVLLLICIAYWAMTALYLAT 381
>BC014659-1|AAH14659.1| 709|Homo sapiens solute carrier family 44,
member 4 protein.
Length = 709
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 635 IFRPLTTFVMMCSCIVFW*MRSVHSPT 555
+F PL TFV++ CI +W M +++ T
Sbjct: 355 MFYPLVTFVLLLICIAYWAMTALYLAT 381
>BA000025-5|BAB63296.1| 712|Homo sapiens NG22 protein.
Length = 712
Score = 30.3 bits (65), Expect = 7.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -1
Query: 635 IFRPLTTFVMMCSCIVFW*MRSVHS-PT--VTTSRVSW 531
+F PL TFV++ CI +W M +++ PT T V W
Sbjct: 355 MFYPLVTFVLLLICIAYWAMTALYPLPTQPATLGYVLW 392
>AL844853-2|CAI41851.1| 710|Homo sapiens chromosome 6 open reading
frame 29 protein.
Length = 710
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 635 IFRPLTTFVMMCSCIVFW*MRSVHSPT 555
+F PL TFV++ CI +W M +++ T
Sbjct: 355 MFYPLVTFVLLLICIAYWAMTALYLAT 381
>AL671762-11|CAI18222.2| 410|Homo sapiens solute carrier family 44,
member 4 protein.
Length = 410
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 635 IFRPLTTFVMMCSCIVFW*MRSVHSPT 555
+F PL TFV++ CI +W M +++ T
Sbjct: 238 MFYPLVTFVLLLICIAYWAMTALYLAT 264
>AL671762-10|CAI18223.2| 710|Homo sapiens solute carrier family 44,
member 4 protein.
Length = 710
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 635 IFRPLTTFVMMCSCIVFW*MRSVHSPT 555
+F PL TFV++ CI +W M +++ T
Sbjct: 355 MFYPLVTFVLLLICIAYWAMTALYLAT 381
>AL662834-22|CAM24990.1| 410|Homo sapiens solute carrier family 44,
member 4 protein.
Length = 410
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 635 IFRPLTTFVMMCSCIVFW*MRSVHSPT 555
+F PL TFV++ CI +W M +++ T
Sbjct: 238 MFYPLVTFVLLLICIAYWAMTALYLAT 264
>AL662834-21|CAI17744.1| 710|Homo sapiens solute carrier family 44,
member 4 protein.
Length = 710
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 635 IFRPLTTFVMMCSCIVFW*MRSVHSPT 555
+F PL TFV++ CI +W M +++ T
Sbjct: 355 MFYPLVTFVLLLICIAYWAMTALYLAT 381
>AK222998-1|BAD96718.1| 710|Homo sapiens NG22 protein variant
protein.
Length = 710
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 635 IFRPLTTFVMMCSCIVFW*MRSVHSPT 555
+F PL TFV++ CI +W M +++ T
Sbjct: 355 MFYPLVTFVLLLICIAYWAMTALYLAT 381
>AK027397-1|BAB55083.1| 710|Homo sapiens protein ( Homo sapiens
cDNA FLJ14491 fis, clone MAMMA1002890. ).
Length = 710
Score = 30.3 bits (65), Expect = 7.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = -1
Query: 635 IFRPLTTFVMMCSCIVFW*MRSVHSPT 555
+F PL TFV++ CI +W M +++ T
Sbjct: 355 MFYPLVTFVLLLICIAYWAMTALYLAT 381
>AF134726-4|AAD21813.1| 712|Homo sapiens NG22 protein.
Length = 712
Score = 30.3 bits (65), Expect = 7.3
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -1
Query: 635 IFRPLTTFVMMCSCIVFW*MRSVHS-PT--VTTSRVSW 531
+F PL TFV++ CI +W M +++ PT T V W
Sbjct: 355 MFYPLVTFVLLLICIAYWAMTALYPLPTQPATLGYVLW 392
>AY184222-1|AAN85434.1| 1873|Homo sapiens DEC-205/DCL-1 fusion protein
variant V34-2 protein.
Length = 1873
Score = 29.9 bits (64), Expect = 9.7
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 204 QHGFARVARWHVEKMPEDCPAATW 275
+HGF RV V K+P DCP++TW
Sbjct: 1651 EHGFGRV----VCKVPLDCPSSTW 1670
>AK000599-1|BAA91280.1| 354|Homo sapiens protein ( Homo sapiens
cDNA FLJ20592 fis, clone KAT08989. ).
Length = 354
Score = 29.9 bits (64), Expect = 9.7
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
Frame = +1
Query: 175 LNSGNGP---SDLSTASRGWPAGTSRR-CPRTAQRRRGSC 282
+N GP SD ST+S P T+ R CPR A GSC
Sbjct: 250 VNQHGGPREDSDSSTSSSACPLWTTARSCPRAAASMPGSC 289
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,530,772
Number of Sequences: 237096
Number of extensions: 2400727
Number of successful extensions: 9699
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9699
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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