Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021228
         (725 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associa...    29   2.6  
AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap (death-as...    29   2.6  
AF003137-7|AAN84856.1|  433|Caenorhabditis elegans Hypothetical ...    29   2.6  
AF003137-6|AAB93644.1|  497|Caenorhabditis elegans Hypothetical ...    29   2.6  
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    29   4.5  

>AY733040-1|AAW57534.1| 1425|Caenorhabditis elegans death-associated
           protein kinase protein.
          Length = 1425

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 463 YIGHLEVSMEQ-QLTTECQLLARVVHADVEVELLLTQDQPVRQPKLKVPHRPGELIVHKA 287
           Y+ + ++ ++    T E  L   V  AD  V  LL Q     +P+L +P+  G+ ++H A
Sbjct: 444 YVANEKIDVDSINKTGETALHCAVESADTRVVRLLLQ----LRPRLDLPNASGDTVLHLA 499

Query: 286 EDSFH 272
            DS +
Sbjct: 500 ADSIN 504


>AF043701-1|AAK18971.2| 1425|Caenorhabditis elegans Dap
           (death-associated protein)kinase homolog protein 1
           protein.
          Length = 1425

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = -2

Query: 463 YIGHLEVSMEQ-QLTTECQLLARVVHADVEVELLLTQDQPVRQPKLKVPHRPGELIVHKA 287
           Y+ + ++ ++    T E  L   V  AD  V  LL Q     +P+L +P+  G+ ++H A
Sbjct: 444 YVANEKIDVDSINKTGETALHCAVESADTRVVRLLLQ----LRPRLDLPNASGDTVLHLA 499

Query: 286 EDSFH 272
            DS +
Sbjct: 500 ADSIN 504


>AF003137-7|AAN84856.1|  433|Caenorhabditis elegans Hypothetical
           protein C27A12.7b protein.
          Length = 433

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = -2

Query: 442 SMEQQLTTECQLLARVVHADVEVELLLTQDQPVRQPKLKVPHRPGELIVHKAE 284
           S ++ L  E + L+ ++  D+E E LLT  Q V+     V HR   L+ H AE
Sbjct: 370 SNQKDLEMETEQLSGLLERDLENEDLLTLKQKVQDTFRYVEHRRKVLLDHCAE 422


>AF003137-6|AAB93644.1|  497|Caenorhabditis elegans Hypothetical
           protein C27A12.7a protein.
          Length = 497

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/53 (35%), Positives = 28/53 (52%)
 Frame = -2

Query: 442 SMEQQLTTECQLLARVVHADVEVELLLTQDQPVRQPKLKVPHRPGELIVHKAE 284
           S ++ L  E + L+ ++  D+E E LLT  Q V+     V HR   L+ H AE
Sbjct: 434 SNQKDLEMETEQLSGLLERDLENEDLLTLKQKVQDTFRYVEHRRKVLLDHCAE 486


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
            protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = -2

Query: 451  LEVSMEQQLTTECQLLARVVHADVEVELLLTQDQPVRQPKLKVPHRPGELIVHKAEDS 278
            LE S   Q   + QL    +  D    L L +D P+ QP+L     P  L+V   EDS
Sbjct: 1009 LEDSPSDQPQLDGQLEPMALLVDKRESLELLEDPPIDQPQLDGQTEPMVLLVILLEDS 1066


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,308,362
Number of Sequences: 27780
Number of extensions: 354162
Number of successful extensions: 940
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 940
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)