Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021228
(725 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 5.1
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 6.8
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 9.0
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 9.0
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.0
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.0
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 9.0
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.0
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 9.0
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.0
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 22.2 bits (45), Expect = 5.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 413 SAPCSGCTRRC*SGAP 366
S CSG T RC +G P
Sbjct: 289 STTCSGHTVRCFTGGP 304
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 6.8
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 388 RVQPEQGADIQLSAAAPY 441
+V + G +QLS AAPY
Sbjct: 883 KVLDKSGRSVQLSWAAPY 900
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/19 (31%), Positives = 14/19 (73%)
Frame = +3
Query: 600 AHHNERCQRTEDADTEVQL 656
+HH+E+ ++ + D+E+ L
Sbjct: 9 SHHDEKFKQLRNEDSEIDL 27
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,308
Number of Sequences: 438
Number of extensions: 4471
Number of successful extensions: 28
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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