Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021227
         (657 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    29   0.034
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   1.7  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   5.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   5.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   5.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   5.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   5.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   5.1  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   5.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   5.1  

>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 29.1 bits (62), Expect = 0.034
 Identities = 24/90 (26%), Positives = 37/90 (41%)
 Frame = -2

Query: 554 ESDAEEHRRRTETYLQMAAYFTHCKLQPVHQILTLRTALNMFFKLKNYRTAASFARRLLE 375
           E+D  +  +   + +     F+ CK   VH I    T    F  +    T+ +F  RL +
Sbjct: 63  EADLRQFYKTAYSAIFTVIDFSLCKAILVHAITIRSTFSWTFIDVFIMLTSTAFVFRLKQ 122

Query: 374 LGPRPEVAQQARKILQACEKTPTDEHQLLY 285
           L  + E+ + AR    A  K    EH  LY
Sbjct: 123 LNAKVEMLKNARVKNTALWKQLRYEHYRLY 152


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = -2

Query: 581 RGTRHGDRQESDAEEHRRRTETYLQMA 501
           R + HG +Q+ D +E+R  + + + MA
Sbjct: 95  RRSLHGPQQQMDGQEYRPDSPSSMHMA 121


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 198 PRTASTFPPAC 230
           P   ST+PPAC
Sbjct: 32  PNANSTYPPAC 42


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 198 PRTASTFPPAC 230
           P   ST+PPAC
Sbjct: 32  PNANSTYPPAC 42


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 198 PRTASTFPPAC 230
           P   ST+PPAC
Sbjct: 32  PNANSTYPPAC 42


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 198 PRTASTFPPAC 230
           P   ST+PPAC
Sbjct: 32  PNANSTYPPAC 42


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 198 PRTASTFPPAC 230
           P   ST+PPAC
Sbjct: 32  PNANSTYPPAC 42


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 198 PRTASTFPPAC 230
           P   ST+PPAC
Sbjct: 32  PNANSTYPPAC 42


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 198 PRTASTFPPAC 230
           P   ST+PPAC
Sbjct: 32  PNANSTYPPAC 42


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 198 PRTASTFPPAC 230
           P   ST+PPAC
Sbjct: 32  PNANSTYPPAC 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,423
Number of Sequences: 336
Number of extensions: 2156
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)