Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021226
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    24   1.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    24   1.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    24   1.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   6.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   6.5  

>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 342 VIGGAVVGLLCAILV 386
           V+GG +VG LCAI +
Sbjct: 11  VVGGGLVGSLCAIFM 25


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 342 VIGGAVVGLLCAILV 386
           V+GG +VG LCAI +
Sbjct: 11  VVGGGLVGSLCAIFM 25


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 342 VIGGAVVGLLCAILV 386
           V+GG +VG LCAI +
Sbjct: 11  VVGGGLVGSLCAIFM 25


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 58  FYNNNKTLKNNSVRHNMN 5
           +Y  NK    NS+RHN++
Sbjct: 119 YYRENKQGWQNSIRHNLS 136


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +1

Query: 25  NCFLKFYYYCKIDFLYFKNTRH 90
           NC+  + YY  +D+L      H
Sbjct: 251 NCYNNYPYYSNMDYLSSSTMSH 272


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 58  FYNNNKTLKNNSVRHNMN 5
           FY  N+    NS+RH+++
Sbjct: 176 FYRQNQQRWQNSIRHSLS 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,278
Number of Sequences: 336
Number of extensions: 4149
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)