Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021226
         (792 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.7  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   6.2  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    23   8.2  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    23   8.2  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 138 TARGRSDPRALIRTAKSTSLKKTPIRQL 221
           T R   +PRA ++   S  LK  P+R L
Sbjct: 111 TTRFAPEPRAEVKFVPSVPLKTPPVRPL 138


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 403 YTMNMTTRIAHNNPTTAPPITAASMPG 323
           Y M + +R+    P+++PP+T  ++ G
Sbjct: 447 YAMLIGSRVIQRTPSSSPPLTPNTICG 473


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 67  ENQFYNNNKTLKNNSVRHN 11
           +N FY+ N    NN+  HN
Sbjct: 138 QNWFYSRNNNNNNNNEHHN 156


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 67  ENQFYNNNKTLKNNSVRHN 11
           +N FY+ N    NN+  HN
Sbjct: 138 QNWFYSRNNNNNNNNEHHN 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 845,884
Number of Sequences: 2352
Number of extensions: 18015
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)