Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021226
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69646-6|CAD44142.1|  287|Caenorhabditis elegans Hypothetical pr...    76   3e-14
Z69646-5|CAA93474.1|  288|Caenorhabditis elegans Hypothetical pr...    76   3e-14
AC084158-11|AAK68558.1|  555|Caenorhabditis elegans Hypothetical...    34   0.13 
AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical ...    32   0.41 
AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical...    31   0.94 
AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical...    31   0.94 
Z69634-2|CAA93451.2|  926|Caenorhabditis elegans Hypothetical pr...    30   1.7  
AL132858-6|CAB60475.1|  412|Caenorhabditis elegans Hypothetical ...    30   2.2  
Z82060-5|CAB04886.1|  257|Caenorhabditis elegans Hypothetical pr...    28   8.8  
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr...    28   8.8  

>Z69646-6|CAD44142.1|  287|Caenorhabditis elegans Hypothetical
           protein F57C7.3b protein.
          Length = 287

 Score = 75.8 bits (178), Expect = 3e-14
 Identities = 36/64 (56%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
 Frame = +3

Query: 321 APGILAAVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALDEPKRSPAAASYG-KGHNNR 497
           A G  AA+ GG +V ++ AIL+V+F+V+R+RKKDEGSYALDEPK++   ASYG    + +
Sbjct: 224 ANGFYAAIAGGVLVAVITAILLVLFVVFRIRKKDEGSYALDEPKQARPYASYGYTKASTK 283

Query: 498 EFYA 509
           EFYA
Sbjct: 284 EFYA 287


>Z69646-5|CAA93474.1|  288|Caenorhabditis elegans Hypothetical
           protein F57C7.3a protein.
          Length = 288

 Score = 75.8 bits (178), Expect = 3e-14
 Identities = 36/64 (56%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
 Frame = +3

Query: 321 APGILAAVIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALDEPKRSPAAASYG-KGHNNR 497
           A G  AA+ GG +V ++ AIL+V+F+V+R+RKKDEGSYALDEPK++   ASYG    + +
Sbjct: 225 ANGFYAAIAGGVLVAVITAILLVLFVVFRIRKKDEGSYALDEPKQARPYASYGYTKASTK 284

Query: 498 EFYA 509
           EFYA
Sbjct: 285 EFYA 288


>AC084158-11|AAK68558.1|  555|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.14 protein.
          Length = 555

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +3

Query: 336 AAVIGGAV-VGLLCAILVVMFIVYRMRKKDEGSYALDEPKRSP 461
           A +IGG V + ++CA+ V+ F  +R RKK++       P R+P
Sbjct: 360 AGIIGGVVALVVVCALAVLFFFCWRNRKKEKPKVVRKAPLRAP 402


>AC006644-4|AAF39835.1| 1030|Caenorhabditis elegans Hypothetical
            protein F55A3.3 protein.
          Length = 1030

 Score = 32.3 bits (70), Expect = 0.41
 Identities = 26/87 (29%), Positives = 35/87 (40%), Gaps = 1/87 (1%)
 Frame = +2

Query: 83   HDILESAVNKPSGGEV-EPHGAGEERPSRPDQNGEINISEEDTNPAIDQEQAGTNVDPVR 259
            +D  E   +  SG E  E    GEE  S  D  G ++  E +     D E+   N D  R
Sbjct: 944  YDPEEEDASAGSGSESDEDESEGEETESDDDDEGSLDSDESEGKDWSDLEEEAANADKRR 1003

Query: 260  GRQKCSS*TPSRKTERSASSRTWHTRR 340
              ++ S     RK   S+ S   H RR
Sbjct: 1004 EVEEPSR-DRDRKRPHSSKSGPSHKRR 1029


>AL132876-20|CAD92404.1| 1127|Caenorhabditis elegans Hypothetical
            protein Y105E8A.24b protein.
          Length = 1127

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 28/96 (29%), Positives = 41/96 (42%)
 Frame = +3

Query: 138  TARGRSDPRALIRTAKSTSLKKTPIRQLTRSRRALTWILFAAVRSVHHERQAGRQSDQLL 317
            +ARGR D   L R      L   PIRQ  R+RRA T  L   V S+  E    +  + L 
Sbjct: 959  SARGRGDSE-LDRKTYGEMLSDLPIRQTMRARRAST-NLIKEVISLRKENHLLKNDNALT 1016

Query: 318  RAPGILAAVIGGAVVGLLCAILVVMFIVYRMRKKDE 425
            ++   L   + G    +      V   +  +RKK++
Sbjct: 1017 KSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEK 1052


>AL132876-19|CAD21673.1| 1161|Caenorhabditis elegans Hypothetical
            protein Y105E8A.24a protein.
          Length = 1161

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 28/96 (29%), Positives = 41/96 (42%)
 Frame = +3

Query: 138  TARGRSDPRALIRTAKSTSLKKTPIRQLTRSRRALTWILFAAVRSVHHERQAGRQSDQLL 317
            +ARGR D   L R      L   PIRQ  R+RRA T  L   V S+  E    +  + L 
Sbjct: 959  SARGRGDSE-LDRKTYGEMLSDLPIRQTMRARRAST-NLIKEVISLRKENHLLKNDNALT 1016

Query: 318  RAPGILAAVIGGAVVGLLCAILVVMFIVYRMRKKDE 425
            ++   L   + G    +      V   +  +RKK++
Sbjct: 1017 KSRCALLERVRGGGAMMTSTATAVDDSMEMLRKKEK 1052


>Z69634-2|CAA93451.2|  926|Caenorhabditis elegans Hypothetical
           protein B0001.2 protein.
          Length = 926

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 15/59 (25%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
 Frame = +2

Query: 86  DILESAVNKPSGGEVEPHGAG--EERPSRPDQNGEINISEEDTNPAIDQEQAGTNVDPV 256
           ++++S  +    G+ E   +   + RPS+P +N E   SEE  N + ++++  +NV  +
Sbjct: 328 NVIKSEKDSEDSGDSENENSSSTDSRPSKPKKNVENKKSEEKINNSSEKKEYSSNVPKI 386


>AL132858-6|CAB60475.1|  412|Caenorhabditis elegans Hypothetical
           protein Y113G7A.11 protein.
          Length = 412

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 3/126 (2%)
 Frame = +3

Query: 171 IRTAKSTSLKKTPIRQLTRSRRALTWILFAAVRSVH-HERQAGRQSDQLLRAPGI--LAA 341
           +RTAKS    +T +   T  +   TW+     + +  H+ +AG+ ++  +++P I  + A
Sbjct: 76  VRTAKSMQFGETDVVIATYPKCGTTWLQHITSQLIKGHDYKAGKGNELCVQSPMIERMGA 135

Query: 342 VIGGAVVGLLCAILVVMFIVYRMRKKDEGSYALDEPKRSPAAASYGKGHNNREFYAETTR 521
                + G    +L   F  Y + K  +  Y            SY   H+NR F      
Sbjct: 136 AFADNIKG--PRVLKTHFHHYNIPKYPDTKYIYCVRNPKDCLTSY--FHHNRNFKIYNWA 191

Query: 522 NKTCHV 539
           N T  V
Sbjct: 192 NGTWDV 197


>Z82060-5|CAB04886.1|  257|Caenorhabditis elegans Hypothetical
           protein T27F6.7 protein.
          Length = 257

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/34 (32%), Positives = 25/34 (73%)
 Frame = +2

Query: 2   SIHVVTNRIVF*SFIIIVKLIFYILKTHDILESA 103
           ++H++   +V+ +F+I+V+LI Y+L  + ++ SA
Sbjct: 123 AVHMIPAIMVY-TFLIVVELIVYVLAANHLVNSA 155


>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical
           protein ZK783.1 protein.
          Length = 2585

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 21/67 (31%), Positives = 29/67 (43%)
 Frame = +2

Query: 119 GGEVEPHGAGEERPSRPDQNGEINISEEDTNPAIDQEQAGTNVDPVRGRQKCSS*TPSRK 298
           G + EP  A +   S PD+ GE + +E D    +  E+ G       G    SS   S  
Sbjct: 760 GEDGEPETATKPGISAPDKTGEGSKTESDGEEKLTVEKDGKEAQS-SGSSATSSGKKSEA 818

Query: 299 TERSASS 319
           T  S+SS
Sbjct: 819 TSGSSSS 825


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,508,502
Number of Sequences: 27780
Number of extensions: 396464
Number of successful extensions: 1321
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)