Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021225
(720 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 148 5e-36
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 1e-35
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 143 1e-34
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 117 8e-27
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 81 7e-16
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 6e-14
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 70 2e-12
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 7e-04
SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06) 34 0.10
SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.10
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.94
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.2
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.2
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 2.9
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.9
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 3.8
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 3.8
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24) 28 6.6
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 28 6.6
SB_33942| Best HMM Match : Ribosomal_L37e (HMM E-Value=6.2) 28 8.8
SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05) 28 8.8
SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05) 28 8.8
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 148 bits (358), Expect = 5e-36
Identities = 68/72 (94%), Positives = 70/72 (97%)
Frame = +1
Query: 40 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 219
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 220 MNPNNTIFDAKR 255
MNP NT+FDAKR
Sbjct: 61 MNPENTVFDAKR 72
Score = 137 bits (331), Expect = 1e-32
Identities = 62/97 (63%), Positives = 76/97 (78%)
Frame = +3
Query: 225 PQQHNIRCQTLIGRKFEDATVQADMKHWPYEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 404
P+ + LIGRKF+D V DM HWP+ V+ +G +PKI+V +KGE K+FFPEE+SSM
Sbjct: 63 PENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSM 122
Query: 405 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 515
VLTKMKETAEAYLG V +AV+TVPAYF+DSQRQA K
Sbjct: 123 VLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATK 159
Score = 133 bits (322), Expect = 1e-31
Identities = 64/73 (87%), Positives = 69/73 (94%)
Frame = +2
Query: 500 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 679
+ +TKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+LTIED
Sbjct: 155 RQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIED 214
Query: 680 GIFEVKSTAGDTH 718
GIFEVKSTAGDTH
Sbjct: 215 GIFEVKSTAGDTH 227
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 146 bits (355), Expect = 1e-35
Identities = 67/72 (93%), Positives = 69/72 (95%)
Frame = +1
Query: 40 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 219
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 220 MNPNNTIFDAKR 255
MNP NTIFDAKR
Sbjct: 61 MNPTNTIFDAKR 72
Score = 130 bits (314), Expect = 1e-30
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = +2
Query: 500 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 679
+ +TKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+IED
Sbjct: 248 RQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIED 307
Query: 680 GIFEVKSTAGDTH 718
GIFEVKST GDTH
Sbjct: 308 GIFEVKSTHGDTH 320
Score = 115 bits (276), Expect = 4e-26
Identities = 64/112 (57%), Positives = 74/112 (66%), Gaps = 25/112 (22%)
Frame = +3
Query: 255 LIGRKFEDATVQADMKHWPYEVVSDGGKPKIKVAYKGEDKTFFPEEV------------- 395
LIGR+F+D V+ DMKHW +EVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 73 LIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVVNEAGRPKVKVEY 132
Query: 396 ------------SSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 515
SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQA K
Sbjct: 133 KGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 184
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +3
Query: 390 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 515
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQA K
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATK 252
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 143 bits (347), Expect = 1e-34
Identities = 65/72 (90%), Positives = 69/72 (95%)
Frame = +1
Query: 40 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 219
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 220 MNPNNTIFDAKR 255
+NP NTIFDAKR
Sbjct: 61 LNPENTIFDAKR 72
Score = 140 bits (338), Expect = 1e-33
Identities = 65/97 (67%), Positives = 79/97 (81%)
Frame = +3
Query: 225 PQQHNIRCQTLIGRKFEDATVQADMKHWPYEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 404
P+ + LIGR+++DATVQ+DMK WP++++SD KPKI+V YKGE KTF EE+SSM
Sbjct: 63 PENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSM 122
Query: 405 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 515
VL KMKETAEAYLG+ V +AVITVPAYFNDSQRQA K
Sbjct: 123 VLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATK 159
Score = 128 bits (310), Expect = 3e-30
Identities = 61/74 (82%), Positives = 70/74 (94%), Gaps = 1/74 (1%)
Frame = +2
Query: 500 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 679
+ +TKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSILTI+D
Sbjct: 155 RQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDD 214
Query: 680 G-IFEVKSTAGDTH 718
G +FEVKSTAGDTH
Sbjct: 215 GSLFEVKSTAGDTH 228
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 117 bits (282), Expect = 8e-27
Identities = 56/97 (57%), Positives = 72/97 (74%)
Frame = +3
Query: 225 PQQHNIRCQTLIGRKFEDATVQADMKHWPYEVVSDGGKPKIKVAYKGEDKTFFPEEVSSM 404
P+ + LIGR ++D +VQ D+K +P++VV KP ++V K E KTF EE+S+M
Sbjct: 761 PENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAM 820
Query: 405 VLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 515
VLTKMKETAEAYLGK V +AV+TVPAYFND+QRQA K
Sbjct: 821 VLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATK 857
Score = 117 bits (281), Expect = 1e-26
Identities = 53/73 (72%), Positives = 66/73 (90%)
Frame = +2
Query: 500 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 679
+ +TKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+LTI++
Sbjct: 853 RQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDN 911
Query: 680 GIFEVKSTAGDTH 718
G+FEV +T GDTH
Sbjct: 912 GVFEVVATNGDTH 924
Score = 116 bits (278), Expect = 3e-26
Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 1/67 (1%)
Frame = +1
Query: 58 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 234
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 235 TIFDAKR 255
T+FDAKR
Sbjct: 764 TVFDAKR 770
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 81.4 bits (192), Expect = 7e-16
Identities = 38/71 (53%), Positives = 53/71 (74%)
Frame = +2
Query: 500 KTSTKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIED 679
+ +T A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT DVS+L I+
Sbjct: 185 RNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQG 243
Query: 680 GIFEVKSTAGD 712
G+F + AG+
Sbjct: 244 GMFVTMAMAGN 254
Score = 80.6 bits (190), Expect = 1e-15
Identities = 36/72 (50%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = +1
Query: 46 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 219
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 220 MNPNNTIFDAKR 255
+NP NTI+DAKR
Sbjct: 90 INPKNTIYDAKR 101
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 IGRKFEDATVQADMKHWPYEVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 434
IG+ F + K + + V +D G V KG PEE+ V+ K++ AE
Sbjct: 103 IGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAE 162
Query: 435 AYLGKTVQNAVITVPAYFNDSQRQA 509
L TV AV++VPA F+ QR A
Sbjct: 163 RNLTTTVTKAVMSVPAEFDIKQRNA 187
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 74.9 bits (176), Expect = 6e-14
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 IGRKFEDATVQADMKHWPYEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAE 434
IGRKF D VQ ++ H PY+VV I+V Y G+ + F PE+V +M+ T++K TAE
Sbjct: 130 IGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKTTAE 189
Query: 435 AYLGKTVQNAVITVPAYFNDSQRQ 506
L V + VI+VP+Y+ D QR+
Sbjct: 190 IALKTKVTDCVISVPSYYTDRQRR 213
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 58 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 213
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +2
Query: 515 DAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLIFDLGGGTFDVSILTIEDGI 685
DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D+G + V I G
Sbjct: 217 DASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQ 276
Query: 686 FEVKSTA 706
+V STA
Sbjct: 277 LKVLSTA 283
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/57 (56%), Positives = 45/57 (78%)
Frame = +3
Query: 345 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 515
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQA K
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATK 58
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/28 (82%), Positives = 23/28 (82%), Gaps = 2/28 (7%)
Frame = +2
Query: 542 VLRIINEPTAAAIAYGLDKK--GTGERN 619
VLRIINEPTAAAIAYGLDK G ERN
Sbjct: 92 VLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/33 (63%), Positives = 29/33 (87%)
Frame = +2
Query: 620 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 718
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTY 34
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/57 (35%), Positives = 34/57 (59%)
Frame = +3
Query: 339 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQA 509
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRA 123
Score = 35.1 bits (77), Expect = 0.058
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 4/54 (7%)
Frame = +2
Query: 518 AGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL 667
A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G + +I+
Sbjct: 127 AAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIV 180
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 109 GKVEIIANDQGNRTTPSYVAFTDTERLI 192
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_56988| Best HMM Match : DUF229 (HMM E-Value=2e-06)
Length = 286
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 439 ISAKLCRM-QLSRFPRTSMTLKDKHKR-CRYHLRLERSPNH 555
+SAKLC + LS+ R T HKR C Y +++E SP H
Sbjct: 198 LSAKLCHVVTLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 238
>SB_4173| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 439 ISAKLCRM-QLSRFPRTSMTLKDKHKR-CRYHLRLERSPNH 555
+SAKLC + LS+ R T HKR C Y +++E SP H
Sbjct: 655 LSAKLCHVITLSKIVRALQTHSHLHKRQCSYQIQIETSPAH 695
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.94
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 118 EIIANDQGNRTTPSYVAFT-DTERL 189
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 620 VLIFDLGGGTFDVSILTIEDGIFEVK 697
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 626 IFDLGGGTFDVSILTIEDGIFEV 694
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 717 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 601
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3
Query: 226 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 128
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 244 RILCCWGSSPPGSWRH 197
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 3.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 244 RILCCWGSSPPGSWRH 197
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 633 TSAAVPSTCPSLPSRMVSSR*NPPPATP 716
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 569 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 718
A A L +G E + D G GT VS + +E+G +++ D H
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEH 1554
>SB_37419| Best HMM Match : Pox_A32 (HMM E-Value=0.24)
Length = 1497
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 406 CLRK*RKLPKLISAKLCRMQLSRFPRTSMTLKDKHKRCRYHLRLERSPNH 555
C K R L +++ L Q + T+ L + H R R R R+PNH
Sbjct: 1205 CQHKWRNLKEVLVTSLPERQTGQRNLTNKLLMNLHVRLRRWRRESRAPNH 1254
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -3
Query: 694 HLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVSNRSSSG 563
H+EDT DG DG E +E K + S SN+ G
Sbjct: 486 HIEDTTWDGSDGQREAGFSEQKAERSSSGGNRTTHGASNKPRDG 529
>SB_33942| Best HMM Match : Ribosomal_L37e (HMM E-Value=6.2)
Length = 226
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 406 CLRK*RKLPKLISAKLCRMQLSRFPRTSMTLKDKHKRCRYHLRLERSPNH 555
C K + L +++ L Q+ + T+ L + H R R R R+PNH
Sbjct: 95 CQHKWKNLKEVLVPSLPERQMGQRNLTNKLLMNLHVRLRRWRRESRAPNH 144
>SB_45248| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 809
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 406 CLRK*RKLPKLISAKLCRMQLSRFPRTSMTLKDKHKRCRYHLRLERSPNH 555
C K + L +++ L Q+ + T+ L + H R R R R+PNH
Sbjct: 156 CQHKWKNLKEVLVPSLPERQMGQRNLTNKLLMNLHVRLRRWRRESRAPNH 205
>SB_28193| Best HMM Match : rve (HMM E-Value=2.1e-05)
Length = 983
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 406 CLRK*RKLPKLISAKLCRMQLSRFPRTSMTLKDKHKRCRYHLRLERSPNH 555
C K + L +++ L Q+ + T+ L + H R R R R+PNH
Sbjct: 330 CQHKWKNLKEVLVPSLPERQMGQRNLTNKLLMNLHVRLRRWRRESRAPNH 379
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,915,082
Number of Sequences: 59808
Number of extensions: 563202
Number of successful extensions: 1824
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1816
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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