Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021223
(739 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 28 0.090
AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock prote... 25 0.84
AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein. 24 1.1
AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia or... 24 1.1
AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cogna... 23 1.9
AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock prote... 23 1.9
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 23 2.6
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 23 2.6
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 23 3.4
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 3.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 3.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 3.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 3.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 3.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 3.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 3.4
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 3.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 3.4
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 27.9 bits (59), Expect = 0.090
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 651 WPVSRYPPPPRSLSATPVASQ 713
W ++ PPPP +SA P SQ
Sbjct: 324 WSLTSSPPPPYQISAQPTPSQ 344
>AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock protein
70 protein.
Length = 195
Score = 24.6 bits (51), Expect = 0.84
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 120 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGG 212
+G G+++++I D + GD H+GG
Sbjct: 27 LGGGTFDVSILTIDNGVFEVVATSGDTHLGG 57
>AF321227-6|AAK16426.1| 150|Tribolium castaneum Pb protein.
Length = 150
Score = 24.2 bits (50), Expect = 1.1
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -1
Query: 322 GVFW----SGEPFVSSRPPEGMVRPIFLNSLPKLSVSFSITP 209
G FW SG P ++ P EG F+NS P ++ + P
Sbjct: 34 GGFWLAAASGAPHPAALPIEGCNETGFINSQPSMAEFMTALP 75
>AF187068-1|AAF03888.1| 477|Tribolium castaneum proboscipedia
ortholog protein.
Length = 477
Score = 24.2 bits (50), Expect = 1.1
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -1
Query: 322 GVFW----SGEPFVSSRPPEGMVRPIFLNSLPKLSVSFSITP 209
G FW SG P ++ P EG F+NS P ++ + P
Sbjct: 34 GGFWLAAASGAPHPAALPIEGCNETGFINSQPSMAEFMTALP 75
>AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cognate
70 protein.
Length = 196
Score = 23.4 bits (48), Expect = 1.9
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 120 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVML--KLTESFGKEFKKIGRTMPSG 281
+G G++++++ + GD H+GG +L E ++FKK + SG
Sbjct: 28 LGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADISG 83
>AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock protein
70 protein.
Length = 196
Score = 23.4 bits (48), Expect = 1.9
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 120 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVML--KLTESFGKEFKKIGRTMPSG 281
+G G++++++ + GD H+GG +L E ++FKK + SG
Sbjct: 28 LGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVEYCTQDFKKKHKADISG 83
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 522 LERIASDSSSECLIPRFLHSC 460
+E+I + SS EC+ LH C
Sbjct: 74 VEKILTQSSFECIHLSVLHKC 94
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 174 VFRSDPSHKS*GSTTHHQLFHRPPTFSLVRLIKL 73
+ RS+PS + QL HR PTF+ + L +
Sbjct: 606 IIRSNPSLEEKLQIFALQLTHRAPTFTALGLFPI 639
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 132 THHQLFHRPPTFSLVRLIKLI 70
TH + FH T SL R IK++
Sbjct: 253 THRKPFHPASTQSLSRWIKMV 273
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 288 LETNGSPDQNTPWTST 335
L TNG+P ++TP ST
Sbjct: 116 LSTNGAPPRSTPPLST 131
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 288 LETNGSPDQNTPWTST 335
L TNG+P ++TP ST
Sbjct: 116 LSTNGAPPRSTPPLST 131
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 288 LETNGSPDQNTPWTST 335
L TNG+P ++TP ST
Sbjct: 116 LSTNGAPPRSTPPLST 131
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 288 LETNGSPDQNTPWTST 335
L TNG+P ++TP ST
Sbjct: 116 LSTNGAPPRSTPPLST 131
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 288 LETNGSPDQNTPWTST 335
L TNG+P ++TP ST
Sbjct: 116 LSTNGAPPRSTPPLST 131
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 288 LETNGSPDQNTPWTST 335
L TNG+P ++TP ST
Sbjct: 72 LSTNGAPPRSTPPLST 87
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 288 LETNGSPDQNTPWTST 335
L TNG+P ++TP ST
Sbjct: 116 LSTNGAPPRSTPPLST 131
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 288 LETNGSPDQNTPWTST 335
L TNG+P ++TP ST
Sbjct: 116 LSTNGAPPRSTPPLST 131
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 288 LETNGSPDQNTPWTST 335
L TNG+P ++TP ST
Sbjct: 116 LSTNGAPPRSTPPLST 131
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,147
Number of Sequences: 336
Number of extensions: 3425
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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