Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021223
         (739 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    25   3.2  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   4.3  
AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding pr...    23   7.4  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   7.4  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   9.8  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 15/56 (26%), Positives = 24/56 (42%)
 Frame = +1

Query: 454 RYTTM*KSWYKAF*RTIAGYPLEASHLKQNYQNLKEAKRIKNTPAPDTNTFIAATR 621
           +Y      W K   R +A  P+E  H   N+Q++ +A  +K    P     + A R
Sbjct: 188 KYKVKRNCWPKV--RGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLIAAR 241


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 84  NELVKMLADGEIVGDGSWNLTIYVTDLNE 170
           NE +      +I G GSW   + +TD +E
Sbjct: 310 NENILGFIAADIKGTGSWTQMLLITDYHE 338


>AY146734-1|AAO12094.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP24 protein.
          Length = 176

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 502 IAGYPLEASHLKQNYQNLKEAKRIKNTPAPDTNTF 606
           + G  LEA H+++ +QN +E   +K T     N F
Sbjct: 43  LQGARLEAEHVRRIHQNAREC--VKETGILPKNAF 75


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 276  SGGRLETNGSPDQNTP 323
            SGGRL + G P   TP
Sbjct: 1011 SGGRLSSGGGPPVGTP 1026


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 268 VRPIFLNSLPKLSV 227
           VR IF+N LPKL V
Sbjct: 340 VRTIFINHLPKLLV 353


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,536
Number of Sequences: 2352
Number of extensions: 14627
Number of successful extensions: 38
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)