Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021223
(739 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061360-1|AAL28908.1| 715|Drosophila melanogaster LD28629p pro... 141 8e-34
AE014296-2863|AAF49380.1| 715|Drosophila melanogaster CG7729-PA... 141 8e-34
AY118556-1|AAM49925.1| 708|Drosophila melanogaster LD36089p pro... 131 1e-30
AE014296-764|AAG22245.1| 708|Drosophila melanogaster CG14991-PB... 131 1e-30
AE014296-763|AAF47838.1| 708|Drosophila melanogaster CG14991-PA... 131 1e-30
AF299248-1|AAG22814.1| 2836|Drosophila melanogaster talin protein. 32 0.71
AE014296-1476|AAF50399.1| 2836|Drosophila melanogaster CG6831-PA... 32 0.71
>AY061360-1|AAL28908.1| 715|Drosophila melanogaster LD28629p
protein.
Length = 715
Score = 141 bits (342), Expect = 8e-34
Identities = 60/85 (70%), Positives = 71/85 (83%)
Frame = +2
Query: 254 EDWSDHALWWPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDF 433
+DWSDHALWWP RN WLSR K TLDQ GV AD+ LHFTPMHK LR+QLPDLR++D ++D+
Sbjct: 46 KDWSDHALWWPARNVWLSRTKLTLDQCGVQADSLLHFTPMHKILRVQLPDLRYLDSRVDY 105
Query: 434 SIDTFSAVIQLCKNLGIRHSEELSL 508
S+ TFSAV+ LCK L IR+ EELSL
Sbjct: 106 SVKTFSAVVNLCKQLDIRYPEELSL 130
Score = 55.2 bits (127), Expect = 9e-08
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = +3
Query: 120 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTE 233
VG+ SWNL I++TDL ++TM V+GD HIGG+ML+L +
Sbjct: 4 VGENSWNLRIFITDLALEKTMRVRGDQHIGGIMLQLVD 41
Score = 34.3 bits (75), Expect = 0.18
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 15/63 (23%)
Frame = +1
Query: 514 PLEASHLKQNYQNLKEAKRIKNT---------PAPDTNTFIAATR------GSSNSLDRS 648
PLEA HLK+N+ + KR+ PA DTN+F+ + GS+ SLD+
Sbjct: 133 PLEAEHLKRNFAQVPHQKRVPIAEPDGTTYLQPAADTNSFVPISTSFHGEGGSTGSLDKP 192
Query: 649 NGP 657
+ P
Sbjct: 193 SAP 195
>AE014296-2863|AAF49380.1| 715|Drosophila melanogaster CG7729-PA
protein.
Length = 715
Score = 141 bits (342), Expect = 8e-34
Identities = 60/85 (70%), Positives = 71/85 (83%)
Frame = +2
Query: 254 EDWSDHALWWPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDF 433
+DWSDHALWWP RN WLSR K TLDQ GV AD+ LHFTPMHK LR+QLPDLR++D ++D+
Sbjct: 46 KDWSDHALWWPARNVWLSRTKLTLDQCGVQADSLLHFTPMHKILRVQLPDLRYLDSRVDY 105
Query: 434 SIDTFSAVIQLCKNLGIRHSEELSL 508
S+ TFSAV+ LCK L IR+ EELSL
Sbjct: 106 SVKTFSAVVNLCKQLDIRYPEELSL 130
Score = 55.2 bits (127), Expect = 9e-08
Identities = 22/38 (57%), Positives = 31/38 (81%)
Frame = +3
Query: 120 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTE 233
VG+ SWNL I++TDL ++TM V+GD HIGG+ML+L +
Sbjct: 4 VGENSWNLRIFITDLALEKTMRVRGDQHIGGIMLQLVD 41
Score = 34.3 bits (75), Expect = 0.18
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 15/63 (23%)
Frame = +1
Query: 514 PLEASHLKQNYQNLKEAKRIKNT---------PAPDTNTFIAATR------GSSNSLDRS 648
PLEA HLK+N+ + KR+ PA DTN+F+ + GS+ SLD+
Sbjct: 133 PLEAEHLKRNFAQVPHQKRVPIAEPDGTTYLQPAADTNSFVPISTSFHGEGGSTGSLDKP 192
Query: 649 NGP 657
+ P
Sbjct: 193 SAP 195
>AY118556-1|AAM49925.1| 708|Drosophila melanogaster LD36089p
protein.
Length = 708
Score = 131 bits (316), Expect = 1e-30
Identities = 53/84 (63%), Positives = 69/84 (82%)
Frame = +2
Query: 254 EDWSDHALWWPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDF 433
+DWSDHALWWP +N WL+R + TLDQ GV +D+ LHFTPMHK LR+Q+PDLR++D +++F
Sbjct: 46 KDWSDHALWWPAKNIWLTRTRSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLDYRVNF 105
Query: 434 SIDTFSAVIQLCKNLGIRHSEELS 505
S TF AV+ LCK+L IR+ EELS
Sbjct: 106 SAKTFGAVVSLCKDLDIRYPEELS 129
Score = 53.6 bits (123), Expect = 3e-07
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +3
Query: 120 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTE 233
VG+ +WNL I +TDL ++T+ VKGD HIGGVML L +
Sbjct: 4 VGENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVD 41
Score = 35.1 bits (77), Expect = 0.10
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 11/57 (19%)
Frame = +1
Query: 514 PLEASHLKQNYQNL-------KEAKRIKNT-PAPDTNTFIAAT---RGSSNSLDRSN 651
PLE HLK+N+ L EA I PA DTN+F+ T GS+ SLDRS+
Sbjct: 133 PLEPEHLKKNFSKLPQRKIPVAEANGIAYVQPALDTNSFVPITGAYNGSNGSLDRSH 189
>AE014296-764|AAG22245.1| 708|Drosophila melanogaster CG14991-PB,
isoform B protein.
Length = 708
Score = 131 bits (316), Expect = 1e-30
Identities = 53/84 (63%), Positives = 69/84 (82%)
Frame = +2
Query: 254 EDWSDHALWWPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDF 433
+DWSDHALWWP +N WL+R + TLDQ GV +D+ LHFTPMHK LR+Q+PDLR++D +++F
Sbjct: 46 KDWSDHALWWPAKNIWLTRTRSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLDYRVNF 105
Query: 434 SIDTFSAVIQLCKNLGIRHSEELS 505
S TF AV+ LCK+L IR+ EELS
Sbjct: 106 SAKTFGAVVSLCKDLDIRYPEELS 129
Score = 53.6 bits (123), Expect = 3e-07
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +3
Query: 120 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTE 233
VG+ +WNL I +TDL ++T+ VKGD HIGGVML L +
Sbjct: 4 VGENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVD 41
Score = 35.1 bits (77), Expect = 0.10
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 11/57 (19%)
Frame = +1
Query: 514 PLEASHLKQNYQNL-------KEAKRIKNT-PAPDTNTFIAAT---RGSSNSLDRSN 651
PLE HLK+N+ L EA I PA DTN+F+ T GS+ SLDRS+
Sbjct: 133 PLEPEHLKKNFSKLPQRKIPVAEANGIAYVQPALDTNSFVPITGAYNGSNGSLDRSH 189
>AE014296-763|AAF47838.1| 708|Drosophila melanogaster CG14991-PA,
isoform A protein.
Length = 708
Score = 131 bits (316), Expect = 1e-30
Identities = 53/84 (63%), Positives = 69/84 (82%)
Frame = +2
Query: 254 EDWSDHALWWPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDF 433
+DWSDHALWWP +N WL+R + TLDQ GV +D+ LHFTPMHK LR+Q+PDLR++D +++F
Sbjct: 46 KDWSDHALWWPAKNIWLTRTRSTLDQAGVQSDSFLHFTPMHKTLRVQMPDLRYLDYRVNF 105
Query: 434 SIDTFSAVIQLCKNLGIRHSEELS 505
S TF AV+ LCK+L IR+ EELS
Sbjct: 106 SAKTFGAVVSLCKDLDIRYPEELS 129
Score = 53.6 bits (123), Expect = 3e-07
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +3
Query: 120 VGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTE 233
VG+ +WNL I +TDL ++T+ VKGD HIGGVML L +
Sbjct: 4 VGENTWNLRILITDLQVEKTLRVKGDQHIGGVMLNLVD 41
Score = 35.1 bits (77), Expect = 0.10
Identities = 25/57 (43%), Positives = 31/57 (54%), Gaps = 11/57 (19%)
Frame = +1
Query: 514 PLEASHLKQNYQNL-------KEAKRIKNT-PAPDTNTFIAAT---RGSSNSLDRSN 651
PLE HLK+N+ L EA I PA DTN+F+ T GS+ SLDRS+
Sbjct: 133 PLEPEHLKKNFSKLPQRKIPVAEANGIAYVQPALDTNSFVPITGAYNGSNGSLDRSH 189
>AF299248-1|AAG22814.1| 2836|Drosophila melanogaster talin protein.
Length = 2836
Score = 32.3 bits (70), Expect = 0.71
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +2
Query: 299 WLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVIQLCKNL 478
WL P TL Y +H L + + LR+++ D +D S ++ +C +
Sbjct: 63 WLE-PGRTLGYYILHNQDTLEYRRKTRTLRVRMLDGAVKTILVDDSQPVSQLMVVICTKI 121
Query: 479 GIRHSEELSL 508
GI + EE L
Sbjct: 122 GITNHEEYGL 131
>AE014296-1476|AAF50399.1| 2836|Drosophila melanogaster CG6831-PA
protein.
Length = 2836
Score = 32.3 bits (70), Expect = 0.71
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +2
Query: 299 WLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVIQLCKNL 478
WL P TL Y +H L + + LR+++ D +D S ++ +C +
Sbjct: 63 WLE-PGRTLGYYILHNQDTLEYRRKTRTLRVRMLDGAVKTILVDDSQPVSQLMVVICTKI 121
Query: 479 GIRHSEELSL 508
GI + EE L
Sbjct: 122 GITNHEEYGL 131
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,464,298
Number of Sequences: 53049
Number of extensions: 674406
Number of successful extensions: 2119
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1937
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2119
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -