Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021223
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical pr... 126 1e-29
AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein. 126 1e-29
Z46934-9|CAD18881.1| 204|Caenorhabditis elegans Hypothetical pr... 31 0.85
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 29 4.5
U41030-4|AAA82364.1| 547|Caenorhabditis elegans Hypothetical pr... 29 4.5
>Z75530-6|CAA99790.1| 720|Caenorhabditis elegans Hypothetical
protein C47E8.7 protein.
Length = 720
Score = 126 bits (305), Expect = 1e-29
Identities = 51/87 (58%), Positives = 68/87 (78%)
Frame = +2
Query: 248 VQEDWSDHALWWPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKI 427
V+ DWSDHALWWP + +WL + TLDQ G+ A+ L FTPMHK RIQLPD++ ID ++
Sbjct: 51 VERDWSDHALWWPEKRRWLQHTRSTLDQNGITAETQLEFTPMHKEARIQLPDMQMIDARV 110
Query: 428 DFSIDTFSAVIQLCKNLGIRHSEELSL 508
DFS+++F A +LC++LGIR+SEELSL
Sbjct: 111 DFSVNSFKATKKLCRDLGIRYSEELSL 137
Score = 47.6 bits (108), Expect = 9e-06
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +3
Query: 102 LADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTE--SFGKEFKKIGRTMP 275
L +G + DG W L I VTDLN +R++ V G++++GG+ML+L +++ P
Sbjct: 4 LVEGTSIIDGKWQLPILVTDLNIQRSISVLGNLNVGGLMLELVSECDVERDWSDHALWWP 63
Query: 276 SGGR--LETNGSPDQN--TPWTSTEFT 344
R T + DQN T T EFT
Sbjct: 64 EKRRWLQHTRSTLDQNGITAETQLEFT 90
>AF217185-1|AAF20162.1| 720|Caenorhabditis elegans UNC-112 protein.
Length = 720
Score = 126 bits (305), Expect = 1e-29
Identities = 51/87 (58%), Positives = 68/87 (78%)
Frame = +2
Query: 248 VQEDWSDHALWWPTRNKWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKI 427
V+ DWSDHALWWP + +WL + TLDQ G+ A+ L FTPMHK RIQLPD++ ID ++
Sbjct: 51 VERDWSDHALWWPEKRRWLQHTRSTLDQNGITAETQLEFTPMHKEARIQLPDMQMIDARV 110
Query: 428 DFSIDTFSAVIQLCKNLGIRHSEELSL 508
DFS+++F A +LC++LGIR+SEELSL
Sbjct: 111 DFSVNSFKATKKLCRDLGIRYSEELSL 137
Score = 47.6 bits (108), Expect = 9e-06
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +3
Query: 102 LADGEIVGDGSWNLTIYVTDLNEKRTMVVKGDMHIGGVMLKLTE--SFGKEFKKIGRTMP 275
L +G + DG W L I VTDLN +R++ V G++++GG+ML+L +++ P
Sbjct: 4 LVEGTSIIDGKWQLPILVTDLNIQRSISVLGNLNVGGLMLELVSECDVERDWSDHALWWP 63
Query: 276 SGGR--LETNGSPDQN--TPWTSTEFT 344
R T + DQN T T EFT
Sbjct: 64 EKRRWLQHTRSTLDQNGITAETQLEFT 90
>Z46934-9|CAD18881.1| 204|Caenorhabditis elegans Hypothetical
protein ZK1320.11 protein.
Length = 204
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 502 IAGYPLEASHLKQNYQN-LKEAKRIKNTPAPDTNTFIAATRGSSN 633
+ G+ EA+H ++N++ + EA+ N PD + F RG+++
Sbjct: 32 LEGWQTEAAHEEENFEKFITEAREFSNMSPPDIDQFEIKARGAAS 76
>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 99 MLADGEIVGDGSWNLTIYVTDLNEK 173
+ A G ++GD S NLTI+ T+++ K
Sbjct: 1244 LTASGHVLGDSSTNLTIHSTNIHSK 1268
>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical protein
C14B4.2 protein.
Length = 1776
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +3
Query: 99 MLADGEIVGDGSWNLTIYVTDLNEK 173
+ A G ++GD S NLTI+ T+++ K
Sbjct: 1244 LTASGHVLGDSSTNLTIHSTNIHSK 1268
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 303 SPDQNTPWTSTEFTRTPPYTSRPCTNH 383
S ++ W+ + R PP SRPC H
Sbjct: 147 STGKSVQWSQCDARRRPPEKSRPCNQH 173
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
protein F53B6.2a protein.
Length = 1045
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 303 SPDQNTPWTSTEFTRTPPYTSRPCTNH 383
S ++ W+ + R PP SRPC H
Sbjct: 481 STGKSVQWSQCDARRRPPEKSRPCNQH 507
>U41030-4|AAA82364.1| 547|Caenorhabditis elegans Hypothetical
protein C44C1.4a protein.
Length = 547
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 117 IVGDGSWNLTIYVTDLNEKRTMVVKGD-MHIGGVMLKLTESFGKEFKKIGR 266
IVG ++ YV LNEKR G + + G + T+SF +EF + +
Sbjct: 491 IVGGATYEEAAYVRSLNEKRMQGYGGPAVVLAGSSMLNTKSFLEEFANVDK 541
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,155,797
Number of Sequences: 27780
Number of extensions: 328006
Number of successful extensions: 1060
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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