Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021223
(739 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g49730.2 68414.m05577 protein kinase family protein contains ... 33 0.20
At1g49730.1 68414.m05575 protein kinase family protein contains ... 33 0.20
At1g07240.1 68414.m00770 UDP-glucoronosyl/UDP-glucosyl transfera... 29 4.3
At5g65380.1 68418.m08223 ripening-responsive protein, putative s... 28 5.6
At5g54310.1 68418.m06764 ARF GAP-like zinc finger-containing pro... 28 5.6
At5g19420.1 68418.m02314 zinc finger protein, putative / regulat... 28 5.6
At5g12350.1 68418.m01453 zinc finger protein, putative / regulat... 28 5.6
At1g14710.2 68414.m01759 hydroxyproline-rich glycoprotein family... 28 5.6
At1g14710.1 68414.m01758 hydroxyproline-rich glycoprotein family... 28 5.6
At2g11090.1 68415.m01187 expressed protein 28 7.4
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 28 7.4
At1g06070.1 68414.m00636 bZIP transcription factor, putative (bZ... 27 9.8
>At1g49730.2 68414.m05577 protein kinase family protein contains
Pfam PF00069: Protein kinase domain; similar to AtPK2324
(GI:1785621) [Arabidopsis thaliana]; similar to
receptor-like protein kinase (GI:1644291) [Catharanthus
roseus]; similar to somatic embryogenesis receptor-like
kinase (GI:2224911) [Daucus carota]
Length = 450
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 383 LRIQLPDLRFIDCKIDFSIDTFSAVIQLCKNL 478
L QLP L DC +DFS F+ V +C N+
Sbjct: 16 LATQLPSLMAADCPLDFSGSNFTLVATVCSNI 47
>At1g49730.1 68414.m05575 protein kinase family protein contains
Pfam PF00069: Protein kinase domain; similar to AtPK2324
(GI:1785621) [Arabidopsis thaliana]; similar to
receptor-like protein kinase (GI:1644291) [Catharanthus
roseus]; similar to somatic embryogenesis receptor-like
kinase (GI:2224911) [Daucus carota]
Length = 663
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 383 LRIQLPDLRFIDCKIDFSIDTFSAVIQLCKNL 478
L QLP L DC +DFS F+ V +C N+
Sbjct: 16 LATQLPSLMAADCPLDFSGSNFTLVATVCSNI 47
>At1g07240.1 68414.m00770 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 480
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 504 DSSSECLIPRFLHSCITALNVSIEKSILQSMNLKSGSWILSGLCMGVKC 358
D+SSE I F+H I L +I+ + S + GS ++GL + C
Sbjct: 82 DTSSETYILDFIHKNIPCLRKTIQDLVSSSSSSGGGSSHVAGLILDFFC 130
>At5g65380.1 68418.m08223 ripening-responsive protein, putative
similar to ripening regulated protein DDTFR18
[Lycopersicon esculentum] GI:12231296; contains Pfam
profile PF01554: Uncharacterized membrane protein family
Length = 486
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 296 KWLSRPKHTLDQYGVHADAALHFTPMHKPLRIQLPDLRFIDCKIDFSIDTFSAVIQL 466
K+L +P + GV A+ P+H + P RF+ C++ + ++A + L
Sbjct: 145 KFLGQPDDIAELSGV---VAIWVIPLHFAFTLSFPLQRFLQCQLKNRVTAYAAAVAL 198
>At5g54310.1 68418.m06764 ARF GAP-like zinc finger-containing
protein ZIGA3 (ZIGA3) nearly identical to ARF GAP-like
zinc finger-containing protein ZIGA3 GI:10441352 from
[Arabidopsis thaliana]; contains InterPro accession
IPR001164: Human Rev interacting-like protein (hRIP)
Length = 483
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 504 RWLSARGVTSKTELSKSERS*KNKEHSGSGHEYIHSSDK-RLFE 632
RW+S RG +++ + K+ E SG G+E+ HSS LFE
Sbjct: 121 RWVS-RGEKARSPPRVEQERRKSVERSGPGYEHGHSSSPVNLFE 163
>At5g19420.1 68418.m02314 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1124
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 654 PVSRYPPPPRSLSATPVAS 710
P+SR P PPRS + TP S
Sbjct: 856 PISRRPSPPRSTTPTPTLS 874
>At5g12350.1 68418.m01453 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1062
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 654 PVSRYPPPPRSLSATPVAS 710
P+SR P PPRS + TP S
Sbjct: 820 PISRRPSPPRSTTPTPTLS 838
>At1g14710.2 68414.m01759 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 601
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 301 PFVSSRPPEGMVRPIFLNSLPKLS 230
P S RPP G V+PIF+ P L+
Sbjct: 491 PTPSHRPPNGAVQPIFIPPSPPLA 514
>At1g14710.1 68414.m01758 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 601
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 301 PFVSSRPPEGMVRPIFLNSLPKLS 230
P S RPP G V+PIF+ P L+
Sbjct: 491 PTPSHRPPNGAVQPIFIPPSPPLA 514
>At2g11090.1 68415.m01187 expressed protein
Length = 151
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 267 TMPSGGRLETNGSPDQNTPWTSTEFTRTPPYTSRP 371
T P G + + S +TPW+ST +T T + S P
Sbjct: 20 TRPRGRVEDLSTSRHHSTPWSSTTWTTTRSHYSTP 54
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = +3
Query: 267 TMPSGGRLETNGS-PDQNTPWTSTEFTRTPP 356
T P G TNG+ P TP+ T F TPP
Sbjct: 119 TTPPTGTTPTNGTTPFPGTPFPGTPFPGTPP 149
>At1g06070.1 68414.m00636 bZIP transcription factor, putative
(bZIP69) similar to transcriptional activator RF2a
GB:AF005492 GI:2253277 from [Oryza sativa]; contains
Pfam profile PF00170: bZIP transcription factor
Length = 423
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 255 KIGRTMPSGGRLETNGSPDQNTPWT 329
++ R MPS G+ E+ SPD+ TP T
Sbjct: 397 ELRRPMPSPGQKESVTSPDRETPLT 421
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,216,298
Number of Sequences: 28952
Number of extensions: 310326
Number of successful extensions: 1011
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1010
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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