Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021222
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    28   0.063
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    28   0.063
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.44 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 28.3 bits (60), Expect = 0.063
 Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
 Frame = +2

Query: 365 FQEGRGPSH-AKGAHRTPLEAHQNGAETTRGQPAPPAHHTPTVGFTLHHHDLRLVQAFWL 541
           F   R  +H      RTP+E  Q+   +   +    A+    +G  LHH    LV  F  
Sbjct: 159 FARAREEAHIVPEGSRTPIEIPQDFTASDLDEEHRVAYWREDIGLNLHHWHWHLVYPFEG 218

Query: 542 NMEVEETNTR 571
             E+ + N R
Sbjct: 219 AREIVDKNRR 228


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 0.063
 Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
 Frame = +1

Query: 361 WFPRRSWSVACKRSTPYALRSPSKWSRNNKRTTCTSSSPYTDGWFYVTPSRPTASA---G 531
           W P    S   ++   +   S    S  N  T C ++ PY     Y++ S  + S    G
Sbjct: 219 WSPASIDSFTLEQHRSWCSSSQPVLSTTNSTTNCYNNYPYYSNMDYLSSSTMSHSQFGNG 278

Query: 532 LLAEYGSRRDE 564
           L   +G  RDE
Sbjct: 279 LETSWGKSRDE 289


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 0.44
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +2

Query: 407 RTPLEAHQNGAETTRGQPAPPAHHTPTVGFTLHHHDLRLVQAFWLNMEVEETNTR 571
           RTP+E  ++   +   +    A+    +G  LHH    LV  F    EV   N R
Sbjct: 174 RTPIEIPRDYTASDLEEEHRLAYFREDLGINLHHWHWHLVYPFEAAREVVAKNRR 228


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 126 VTIFKRNEENRSLALRTTPGGEMSVMQKR 212
           VT+  +N ++      ++ GG  +V Q R
Sbjct: 141 VTVVSKNNDDEQYVWESSAGGSFTVTQDR 169


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 497 TLHHHDLRLVQAF 535
           TLHHH  +L++ F
Sbjct: 856 TLHHHLSKLIRLF 868


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,845
Number of Sequences: 336
Number of extensions: 3035
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)