Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021222
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119139-1|AAM50999.1|  615|Drosophila melanogaster RE41430p pro...    67   2e-11
AE014298-1780|AAF48175.2|  615|Drosophila melanogaster CG11138-P...    67   2e-11
AE014297-186|AAN13261.1|  654|Drosophila melanogaster CG31537-PA...    32   0.85 
AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain ...    29   7.9  
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC...    29   7.9  
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB...    29   7.9  
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA...    29   7.9  

>AY119139-1|AAM50999.1|  615|Drosophila melanogaster RE41430p
           protein.
          Length = 615

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = +2

Query: 254 MLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAH 361
           M+++FSEAVCRGCVNYEGADRIE VL+ ARQ+KR H
Sbjct: 22  MINDFSEAVCRGCVNYEGADRIEAVLDAARQMKRLH 57



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 20/33 (60%), Positives = 22/33 (66%)
 Frame = +3

Query: 192 MSVMQKRQHCYLCDLPRMPWACCMSFQKQCVEG 290
           MS+  KRQHCYLCDLPRMPWA    F +    G
Sbjct: 1   MSLQTKRQHCYLCDLPRMPWAMINDFSEAVCRG 33


>AE014298-1780|AAF48175.2|  615|Drosophila melanogaster CG11138-PC,
           isoform C protein.
          Length = 615

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = +2

Query: 254 MLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAH 361
           M+++FSEAVCRGCVNYEGADRIE VL+ ARQ+KR H
Sbjct: 22  MINDFSEAVCRGCVNYEGADRIEAVLDAARQMKRLH 57



 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 20/33 (60%), Positives = 22/33 (66%)
 Frame = +3

Query: 192 MSVMQKRQHCYLCDLPRMPWACCMSFQKQCVEG 290
           MS+  KRQHCYLCDLPRMPWA    F +    G
Sbjct: 1   MSLQTKRQHCYLCDLPRMPWAMINDFSEAVCRG 33


>AE014297-186|AAN13261.1|  654|Drosophila melanogaster CG31537-PA
           protein.
          Length = 654

 Score = 31.9 bits (69), Expect = 0.85
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = +3

Query: 84  YHGDSVFSRRHNKSVTIFKRNEENRSLALRTTPGGEMSVMQKRQHCYLCDLPRMP 248
           Y    + S R   SV   KRN++ + + LRT P    S      HC+    PR P
Sbjct: 483 YRQSVMCSNRQAHSVRQLKRNKQQKHVQLRTKPSSH-SRHHHHHHCHKQQRPRAP 536


>AF175223-1|AAD52614.1| 3469|Drosophila melanogaster SANT domain
            protein SMRTER protein.
          Length = 3469

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +2

Query: 374  GRGPSHAKGAHRTPLEAHQNGAETTRGQPAPP-AHHTPTV-GFTLHHHDLRLVQ 529
            G+ P        +PL  H   A     QP PP AHH       TLHHH   LVQ
Sbjct: 2620 GQVPGSGPPLGPSPLPPH---AVVGVAQPPPPTAHHDQRYRDLTLHHHHHTLVQ 2670


>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
            isoform C protein.
          Length = 3604

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +2

Query: 374  GRGPSHAKGAHRTPLEAHQNGAETTRGQPAPP-AHHTPTV-GFTLHHHDLRLVQ 529
            G+ P        +PL  H   A     QP PP AHH       TLHHH   LVQ
Sbjct: 2755 GQVPGSGPPLGPSPLPPH---AVVGVAQPPPPTAHHDQRYRDLTLHHHHHTLVQ 2805


>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
            isoform B protein.
          Length = 3604

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +2

Query: 374  GRGPSHAKGAHRTPLEAHQNGAETTRGQPAPP-AHHTPTV-GFTLHHHDLRLVQ 529
            G+ P        +PL  H   A     QP PP AHH       TLHHH   LVQ
Sbjct: 2755 GQVPGSGPPLGPSPLPPH---AVVGVAQPPPPTAHHDQRYRDLTLHHHHHTLVQ 2805


>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
            isoform A protein.
          Length = 3604

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +2

Query: 374  GRGPSHAKGAHRTPLEAHQNGAETTRGQPAPP-AHHTPTV-GFTLHHHDLRLVQ 529
            G+ P        +PL  H   A     QP PP AHH       TLHHH   LVQ
Sbjct: 2755 GQVPGSGPPLGPSPLPPH---AVVGVAQPPPPTAHHDQRYRDLTLHHHHHTLVQ 2805


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,817,068
Number of Sequences: 53049
Number of extensions: 633923
Number of successful extensions: 2294
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2274
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)