Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021222
(693 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical p... 31 0.78
Z68303-1|CAC42387.1| 475|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical p... 29 3.2
Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical p... 29 3.2
Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical p... 29 3.2
AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protei... 29 3.2
AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protei... 29 3.2
AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protei... 29 3.2
AF022973-11|AAK84524.3| 560|Caenorhabditis elegans Hypothetical... 29 4.2
AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen pro... 28 7.3
Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical p... 27 9.6
Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81142-2|CAB03504.1| 337|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 27 9.6
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = +2
Query: 254 MLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGPSHAKGAHRTPLEAHQN 433
+++++ E VCRGCVNYEG+DRIE+VLE RQ K+ G P +AK + R Q
Sbjct: 64 IINDYIEPVCRGCVNYEGSDRIELVLEETRQQKKLQGVGIS-DPQNAKTSLRDITLTQQQ 122
Query: 434 GAET 445
+T
Sbjct: 123 PLQT 126
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 210 RQHCYLCDLPRMPWA 254
RQ CYLCDLPR PWA
Sbjct: 49 RQQCYLCDLPRWPWA 63
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = +2
Query: 254 MLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGPSHAKGAHRTPLEAHQN 433
+++++ E VCRGCVNYEG+DRIE+VLE RQ K+ G P +AK + R Q
Sbjct: 91 IINDYIEPVCRGCVNYEGSDRIELVLEETRQQKKLQGVGIS-DPQNAKTSLRDITLTQQQ 149
Query: 434 GAET 445
+T
Sbjct: 150 PLQT 153
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 210 RQHCYLCDLPRMPWA 254
RQ CYLCDLPR PWA
Sbjct: 76 RQQCYLCDLPRWPWA 90
>Z68303-12|CAA92644.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -3
Query: 178 VVRSARDRFSSFLLKIVTDLLCLREKTLSPW*SQIKTQNFTFDFADDSCLLPLHK 14
VV S +R L T+ L + L+P QIK NF++ D SC +HK
Sbjct: 199 VVSSKYNRTVQSALAFSTEFLYKQRTFLAP--IQIKASNFSYHCIDQSCACQIHK 251
>Z68303-1|CAC42387.1| 475|Caenorhabditis elegans Hypothetical
protein ZK792.1b protein.
Length = 475
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -3
Query: 178 VVRSARDRFSSFLLKIVTDLLCLREKTLSPW*SQIKTQNFTFDFADDSCLLPLHK 14
VV S +R L T+ L + L+P QIK NF++ D SC +HK
Sbjct: 199 VVSSKYNRTVQSALAFSTEFLYKQRTFLAP--IQIKASNFSYHCIDQSCACQIHK 251
>Z68302-9|CAA92636.2| 969|Caenorhabditis elegans Hypothetical
protein ZK792.1a protein.
Length = 969
Score = 31.1 bits (67), Expect = 0.78
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = -3
Query: 178 VVRSARDRFSSFLLKIVTDLLCLREKTLSPW*SQIKTQNFTFDFADDSCLLPLHK 14
VV S +R L T+ L + L+P QIK NF++ D SC +HK
Sbjct: 199 VVSSKYNRTVQSALAFSTEFLYKQRTFLAP--IQIKASNFSYHCIDQSCACQIHK 251
>Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical
protein F38B7.1b protein.
Length = 419
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 379 WSVACKRSTPYALRSPSKWSRNNKRTTCTSSSP 477
W++ STP++ PSKWS + T+ +++P
Sbjct: 370 WNIEDSLSTPFSGFLPSKWSTTTEETSPATTTP 402
>Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical
protein F38B7.1a protein.
Length = 460
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 379 WSVACKRSTPYALRSPSKWSRNNKRTTCTSSSP 477
W++ STP++ PSKWS + T+ +++P
Sbjct: 411 WNIEDSLSTPFSGFLPSKWSTTTEETSPATTTP 443
>Z81079-8|CAD56581.2| 1175|Caenorhabditis elegans Hypothetical protein
C36B1.1d protein.
Length = 1175
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 311 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 481
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 823 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 882
Query: 482 PTVGFTLHHH 511
T G ++ H
Sbjct: 883 LTTGTAVNVH 892
>Z81079-7|CAD21643.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 311 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 481
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 426 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 485
Query: 482 PTVGFTLHHH 511
T G ++ H
Sbjct: 486 LTTGTAVNVH 495
>Z81079-6|CAD21644.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 311 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 481
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 786 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 845
Query: 482 PTVGFTLHHH 511
T G ++ H
Sbjct: 846 LTTGTAVNVH 855
>Z81079-1|CAB03084.1| 650|Caenorhabditis elegans Hypothetical
protein C36B1.1c protein.
Length = 650
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 311 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 481
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 298 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 357
Query: 482 PTVGFTLHHH 511
T G ++ H
Sbjct: 358 LTTGTAVNVH 367
>Z80215-18|CAD56563.2| 1175|Caenorhabditis elegans Hypothetical
protein C36B1.1d protein.
Length = 1175
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 311 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 481
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 823 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 882
Query: 482 PTVGFTLHHH 511
T G ++ H
Sbjct: 883 LTTGTAVNVH 892
>Z80215-17|CAD21700.1| 778|Caenorhabditis elegans Hypothetical
protein C36B1.1b protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 311 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 481
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 426 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 485
Query: 482 PTVGFTLHHH 511
T G ++ H
Sbjct: 486 LTTGTAVNVH 495
>Z80215-16|CAD21701.2| 1138|Caenorhabditis elegans Hypothetical
protein C36B1.1a protein.
Length = 1138
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 311 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 481
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 786 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 845
Query: 482 PTVGFTLHHH 511
T G ++ H
Sbjct: 846 LTTGTAVNVH 855
>AF164959-3|AAD47825.1| 650|Caenorhabditis elegans CLE-1C protein
protein.
Length = 650
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 311 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 481
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 298 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 357
Query: 482 PTVGFTLHHH 511
T G ++ H
Sbjct: 358 LTTGTAVNVH 367
>AF164959-2|AAD47824.1| 778|Caenorhabditis elegans CLE-1B protein
protein.
Length = 778
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 311 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 481
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 426 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 485
Query: 482 PTVGFTLHHH 511
T G ++ H
Sbjct: 486 LTTGTAVNVH 495
>AF164959-1|AAD47823.1| 1117|Caenorhabditis elegans CLE-1A protein
protein.
Length = 1117
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 311 DRIEVVLETARQL-KRAHGFQEGRGPSHAKGAHR--TPLEAHQNGAETTRGQPAPPAHHT 481
D IE + + K ++ G P + H T E + GA G PAPPA+ T
Sbjct: 765 DDIERIARRVASIQKESNEPMRGDLPEYNSKVHSFTTKGEKGERGAPGAPGAPAPPAYGT 824
Query: 482 PTVGFTLHHH 511
T G ++ H
Sbjct: 825 LTTGTAVNVH 834
>AF022973-11|AAK84524.3| 560|Caenorhabditis elegans Hypothetical
protein F25G6.1 protein.
Length = 560
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/40 (32%), Positives = 17/40 (42%)
Frame = +3
Query: 9 CLLCSGNKQLSSAKSNVKFCVFICDYHGDSVFSRRHNKSV 128
CLL G L + CDYH S+ S ++ K V
Sbjct: 353 CLLMDGESSLGEYGKTLDVMTIRCDYHIFSLMSHKYGKPV 392
>AC024214-13|AAM97984.1| 296|Caenorhabditis elegans Collagen
protein 106 protein.
Length = 296
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 377 RGPSHAKGAHRTPLEAHQNGAETTRGQPAPP 469
RGP AKG P A G RG P PP
Sbjct: 194 RGPPGAKGQTYLPGSAGHPGNSGRRGPPGPP 224
>Z83122-10|CAB05601.1| 896|Caenorhabditis elegans Hypothetical
protein R11A5.1b protein.
Length = 896
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 233 LAPHAVGMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGP 385
+ PH + +LH+ A+CRG + + +I V++ + R RGP
Sbjct: 186 ICPHRLDLLHKHFRALCRGLADVDEWGQI-VMINMLTRYARHELADPDRGP 235
>Z83122-9|CAB05598.1| 906|Caenorhabditis elegans Hypothetical
protein R11A5.1a protein.
Length = 906
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 233 LAPHAVGMLHEFSEAVCRGCVNYEGADRIEVVLETARQLKRAHGFQEGRGP 385
+ PH + +LH+ A+CRG + + +I V++ + R RGP
Sbjct: 186 ICPHRLDLLHKHFRALCRGLADVDEWGQI-VMINMLTRYARHELADPDRGP 235
>Z81142-2|CAB03504.1| 337|Caenorhabditis elegans Hypothetical
protein ZK1037.5 protein.
Length = 337
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 384 RRMQKEHTVRP*KPIKMEQKQQEDNLHLQLTIHRR 488
+ +Q + P KP+K+E + Q+ LH L + R+
Sbjct: 82 KAIQHRDLIGPRKPVKVEPETQKSKLHHLLELQRK 116
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 393 QKEHTVRP*KPIKMEQKQQEDNLHLQLTIHRRLVLR 500
QK+ V+ +K E+K + LHL+ +R+ VLR
Sbjct: 809 QKQDAVKELNALKAERKSVQSTLHLEELNNRKRVLR 844
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,859,607
Number of Sequences: 27780
Number of extensions: 306262
Number of successful extensions: 1015
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -