Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021222
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    25   0.90 
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    25   0.90 
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    25   0.90 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.90 
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   6.4  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   8.4  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.4  

>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 16/50 (32%), Positives = 19/50 (38%)
 Frame = +1

Query: 376 SWSVACKRSTPYALRSPSKWSRNNKRTTCTSSSPYTDGWFYVTPSRPTAS 525
           +W +AC  S P A    SK  R N  T     S   D     T   P+ S
Sbjct: 11  AWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLS 60


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 16/50 (32%), Positives = 19/50 (38%)
 Frame = +1

Query: 376 SWSVACKRSTPYALRSPSKWSRNNKRTTCTSSSPYTDGWFYVTPSRPTAS 525
           +W +AC  S P A    SK  R N  T     S   D     T   P+ S
Sbjct: 11  AWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLS 60


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 16/50 (32%), Positives = 19/50 (38%)
 Frame = +1

Query: 376 SWSVACKRSTPYALRSPSKWSRNNKRTTCTSSSPYTDGWFYVTPSRPTAS 525
           +W +AC  S P A    SK  R N  T     S   D     T   P+ S
Sbjct: 11  AWFIACTHSFPGAHDEDSKEERKNVDTVLVLPSIERDQMMAATFDFPSLS 60


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +2

Query: 404 HRTPLEAHQNGAETTRGQPAPPAHHTPTVGFTLHHHDLRLVQ 529
           HR     HQ+G  T      PP HH        HHH  + +Q
Sbjct: 329 HRGSSPHHQHGNHTMGPTMGPPHHH--------HHHQTQSLQ 362


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 362 GFQEGRGPSHAKGAHRTPLEAH 427
           GF+ G+G         TP+EAH
Sbjct: 170 GFEPGKGLGKQLQGISTPVEAH 191


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 467 PAHHTPTVGFTLHHH 511
           PA   P V +TL HH
Sbjct: 160 PASADPMVNYTLGHH 174


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 257 LHEFSEAVCRGCVNYEGADRIEVVLETARQLKR 355
           +HE   A C   V   G  R+E +L    Q+ R
Sbjct: 65  VHEKGGASCGPNVYNRGVQRLEAMLFAVDQINR 97


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,742
Number of Sequences: 438
Number of extensions: 3440
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)