Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021221
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    27   0.58 
DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide...    24   5.4  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   5.4  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   9.4  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 27.1 bits (57), Expect = 0.58
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +2

Query: 113 NRLLEMSSDRKKIPDPPTPVPSTGNLLSNVAPPLQLP 223
           NR  + ++   + P PP   P   +L+++VAP   LP
Sbjct: 364 NRFTQSTAMHNQPPPPPYQPPQPYSLMASVAPSYGLP 400


>DQ437579-1|ABD96049.1|  575|Anopheles gambiae short neuropeptide F
           receptor protein.
          Length = 575

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 188 LLSNVAPPLQLPNFVTAVAEPMLR 259
           LLS V PPL LP  +T    P ++
Sbjct: 475 LLSEVVPPLSLPPPLTGAMLPSVQ 498


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +1

Query: 370 SKGTPLMSIRSPEYSETAQTPESIPEISPEMDSFSDIMPGT 492
           +K TPL +  +    E A  PE+I  + PE  +  + +P T
Sbjct: 502 AKTTPLTTTTTST-EEPALEPETIMAVEPESTTLMEELPTT 541


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = +1

Query: 355 PAIPPSKGTPLMSIRSPEYSETAQTPESIPEISPEMDSFSDIMPGTGLLTWGRVQLPVVV 534
           PAIP S  +PL +  S   S +A    S+   SP     +   P + +      Q P V+
Sbjct: 231 PAIPVSSCSPLSTASSASCSSSA--AGSLCPTSPPASVSNGEQPASSVGDPANPQQPSVI 288

Query: 535 F 537
           F
Sbjct: 289 F 289


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,586
Number of Sequences: 2352
Number of extensions: 13954
Number of successful extensions: 55
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)