Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021220
         (781 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB6D2E Cluster: PREDICTED: similar to PDZ domain...    40   0.053
UniRef50_UPI00015B541B Cluster: PREDICTED: similar to ENSANGP000...    38   0.28 
UniRef50_UPI000065EDBC Cluster: Ubiquitin-associated protein 2.;...    34   3.5  
UniRef50_A4J5K9 Cluster: Putative uncharacterized protein; n=1; ...    34   4.6  
UniRef50_UPI00015C4033 Cluster: cell division protein DivIB; n=1...    33   6.1  
UniRef50_Q55EL6 Cluster: Putative uncharacterized protein; n=1; ...    33   6.1  
UniRef50_Q16ZD4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.1  
UniRef50_Q84R86 Cluster: Putative uncharacterized protein OSJNBb...    33   8.0  

>UniRef50_UPI0000DB6D2E Cluster: PREDICTED: similar to PDZ domain
           containing 3; n=1; Apis mellifera|Rep: PREDICTED:
           similar to PDZ domain containing 3 - Apis mellifera
          Length = 979

 Score = 40.3 bits (90), Expect = 0.053
 Identities = 16/44 (36%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
 Frame = +3

Query: 513 LVTALPAMVMEDDVKEMK-KVFATWGRRMGKKLEMLKKSEVKET 641
           +VTA+PA ++E + ++ +   F  WGRRM KK++  +++  +ET
Sbjct: 97  MVTAVPAFIVEHEPEKQRGSSFGVWGRRMSKKIDSFRRAGSRET 140


>UniRef50_UPI00015B541B Cluster: PREDICTED: similar to
           ENSANGP00000028946; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000028946 - Nasonia
           vitripennis
          Length = 938

 Score = 37.9 bits (84), Expect = 0.28
 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
 Frame = +3

Query: 513 LVTALPAMVMEDDVKEMKKVFATWG-RRMGKKLEMLKKSEVKET----DDEPQHSENL 671
           +VTA+PA ++E +  E +K    WG RRM KK++  ++S  +ET     + P  + NL
Sbjct: 92  VVTAVPAFIVEHE-PEKQKGLGVWGLRRMSKKIDSFRRSSSRETICTIPERPDSNHNL 148


>UniRef50_UPI000065EDBC Cluster: Ubiquitin-associated protein 2.;
           n=1; Takifugu rubripes|Rep: Ubiquitin-associated protein
           2. - Takifugu rubripes
          Length = 730

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 34  EPASQSAPALIKTYPHSHRSACLYAPPSDNVLSTTT 141
           EP S S+P L+ T  H H+S     PPS +V S+T+
Sbjct: 265 EPPSSSSPNLVFTNSHHHQSPAQQQPPSLSVASSTS 300


>UniRef50_A4J5K9 Cluster: Putative uncharacterized protein; n=1;
           Desulfotomaculum reducens MI-1|Rep: Putative
           uncharacterized protein - Desulfotomaculum reducens MI-1
          Length = 75

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +3

Query: 606 LEMLKKSEVKETDDEPQHSENLKVETTVAITG-HYKKKQQWKMGAKY 743
           +E+LK    K +  + + S NL ++ TV IT  HY K+ +W  G +Y
Sbjct: 30  MELLKD---KHSQQDKRQSSNLPLQKTVRITNNHYHKRSKWDGGKRY 73


>UniRef50_UPI00015C4033 Cluster: cell division protein DivIB; n=1;
           Streptococcus gordonii str. Challis substr. CH1|Rep:
           cell division protein DivIB - Streptococcus gordonii
           str. Challis substr. CH1
          Length = 397

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +3

Query: 549 DVKEMKKVFATWGRRMGKKLEMLKKSEVKETDDEPQHSENLK 674
           D KE++K  + W +R  + LE   + +  ETD+E +++E L+
Sbjct: 8   DQKELQKYLSEWQKRHQEYLEKKSQEKASETDEEERNAEPLE 49


>UniRef50_Q55EL6 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 155

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +3

Query: 552 VKEMKKVFATWGRRMGKK-LEMLKKSEVKETDDEPQHSENLKVETTVAITGHYKKKQQWK 728
           ++++KK    +GR   K+ LE +K++     D+E QH   L+  T   + GH +  + WK
Sbjct: 15  IEKVKKFIGAFGRLNEKEALEFIKEN----LDEEYQHVIKLECGTESKVLGHQQTLEYWK 70

Query: 729 MGAK 740
           +  K
Sbjct: 71  LALK 74


>UniRef50_Q16ZD4 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1267

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 20/49 (40%), Positives = 25/49 (51%)
 Frame = +3

Query: 543 EDDVKEMKKVFATWGRRMGKKLEMLKKSEVKETDDEPQHSENLKVETTV 689
           ED  KE KKV     ++  KK E  KK E  E+D E + SE   V  T+
Sbjct: 816 EDKKKETKKVEVKEEKKEEKKKEKEKKKEETESDSESEESEEEVVTRTL 864


>UniRef50_Q84R86 Cluster: Putative uncharacterized protein
           OSJNBb0041J20.19; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBb0041J20.19 - Oryza sativa subsp. japonica (Rice)
          Length = 421

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 15/26 (57%), Positives = 15/26 (57%)
 Frame = +2

Query: 38  PRPSPRPPLSKHTRIRIDPHVFTHLP 115
           P P P PPL    R RIDPH  T LP
Sbjct: 7   PTPPPLPPLFPQNRHRIDPHEPTPLP 32


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,992,656
Number of Sequences: 1657284
Number of extensions: 13370083
Number of successful extensions: 46131
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 42842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46033
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)