Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021220
(781 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058433-1|AAL13662.1| 1329|Drosophila melanogaster GH21134p pro... 31 1.8
AF188475-1|AAF37818.1| 1329|Drosophila melanogaster PDZ domain p... 31 1.8
AF188474-1|AAF37817.1| 1329|Drosophila melanogaster PDZ domain p... 31 1.8
AF188473-1|AAF37816.1| 1329|Drosophila melanogaster PDZ domain p... 31 1.8
AE013599-3348|AAX52678.1| 1329|Drosophila melanogaster CG6741-PC... 31 1.8
AE013599-3347|AAF46809.2| 1329|Drosophila melanogaster CG6741-PB... 31 1.8
AE013599-3346|AAF46810.2| 1329|Drosophila melanogaster CG6741-PA... 31 1.8
AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protei... 31 2.4
AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB... 30 3.1
AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA... 30 3.1
AF175689-1|AAD51842.1| 1048|Drosophila melanogaster heparan sulf... 29 5.4
AE014296-1120|AAF50658.1| 1048|Drosophila melanogaster CG8339-PA... 29 5.4
AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB... 29 7.2
>AY058433-1|AAL13662.1| 1329|Drosophila melanogaster GH21134p
protein.
Length = 1329
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +3
Query: 564 KKVFATWGRRMGKKLEMLKKSE 629
+ VF TWG+RM +KL++LK+S+
Sbjct: 328 RNVF-TWGKRMSRKLDLLKRSD 348
>AF188475-1|AAF37818.1| 1329|Drosophila melanogaster PDZ domain
protein Arc protein.
Length = 1329
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +3
Query: 564 KKVFATWGRRMGKKLEMLKKSE 629
+ VF TWG+RM +KL++LK+S+
Sbjct: 328 RNVF-TWGKRMSRKLDLLKRSD 348
>AF188474-1|AAF37817.1| 1329|Drosophila melanogaster PDZ domain
protein Arc protein.
Length = 1329
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +3
Query: 564 KKVFATWGRRMGKKLEMLKKSE 629
+ VF TWG+RM +KL++LK+S+
Sbjct: 328 RNVF-TWGKRMSRKLDLLKRSD 348
>AF188473-1|AAF37816.1| 1329|Drosophila melanogaster PDZ domain
protein Arc protein.
Length = 1329
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +3
Query: 564 KKVFATWGRRMGKKLEMLKKSE 629
+ VF TWG+RM +KL++LK+S+
Sbjct: 328 RNVF-TWGKRMSRKLDLLKRSD 348
>AE013599-3348|AAX52678.1| 1329|Drosophila melanogaster CG6741-PC,
isoform C protein.
Length = 1329
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +3
Query: 564 KKVFATWGRRMGKKLEMLKKSE 629
+ VF TWG+RM +KL++LK+S+
Sbjct: 328 RNVF-TWGKRMSRKLDLLKRSD 348
>AE013599-3347|AAF46809.2| 1329|Drosophila melanogaster CG6741-PB,
isoform B protein.
Length = 1329
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +3
Query: 564 KKVFATWGRRMGKKLEMLKKSE 629
+ VF TWG+RM +KL++LK+S+
Sbjct: 328 RNVF-TWGKRMSRKLDLLKRSD 348
>AE013599-3346|AAF46810.2| 1329|Drosophila melanogaster CG6741-PA,
isoform A protein.
Length = 1329
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +3
Query: 564 KKVFATWGRRMGKKLEMLKKSE 629
+ VF TWG+RM +KL++LK+S+
Sbjct: 328 RNVF-TWGKRMSRKLDLLKRSD 348
>AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protein
protein.
Length = 1982
Score = 30.7 bits (66), Expect = 2.4
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 555 KEMKKVFATWGRRMGKKLEMLKKSEVKETDDEPQHSENLKVETTVAITGHYKKKQQWKMG 734
K+ KK G G+K + KK+E +E D QH E ++ +T + +K+++ K
Sbjct: 54 KKGKKRKTRKGEEKGRKKKKRKKNESEEDSDFVQHDEEVEYPST---SKRARKRKEEKQA 110
Query: 735 AK 740
AK
Sbjct: 111 AK 112
>AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB,
isoform B protein.
Length = 1983
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 555 KEMKKVFATWGRRMGKKLEMLKKSEVKETDDEPQHSENLKVETTVAITGHYKKKQQWKMG 734
K+ KK G G+K + KK+E +E D QH E ++ +T + +K+++ K
Sbjct: 55 KKGKKRKTRKGEEKGRKKKKRKKNESEEDSDFVQHDEEVEYPST---SKRGRKRKEEKQA 111
Query: 735 AK 740
AK
Sbjct: 112 AK 113
>AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA,
isoform A protein.
Length = 1982
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +3
Query: 555 KEMKKVFATWGRRMGKKLEMLKKSEVKETDDEPQHSENLKVETTVAITGHYKKKQQWKMG 734
K+ KK G G+K + KK+E +E D QH E ++ +T + +K+++ K
Sbjct: 54 KKGKKRKTRKGEEKGRKKKKRKKNESEEDSDFVQHDEEVEYPST---SKRGRKRKEEKQA 110
Query: 735 AK 740
AK
Sbjct: 111 AK 112
>AF175689-1|AAD51842.1| 1048|Drosophila melanogaster heparan sulfate
N-deacetylase/N-sulfotransferase homolog protein.
Length = 1048
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 26 GRQNPRPSPRPPLSKHTRIRIDPHVFTHLPVITYSRLLRDCDSVNTFN 169
G+ SP P R+RIDP V + TYS L RD + +N
Sbjct: 220 GKHIRNASPAPDHRSEARLRIDPKVLVFVET-TYSGLGRDIAELLVYN 266
>AE014296-1120|AAF50658.1| 1048|Drosophila melanogaster CG8339-PA
protein.
Length = 1048
Score = 29.5 bits (63), Expect = 5.4
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 26 GRQNPRPSPRPPLSKHTRIRIDPHVFTHLPVITYSRLLRDCDSVNTFN 169
G+ SP P R+RIDP V + TYS L RD + +N
Sbjct: 220 GKHIRNASPAPDHRSEARLRIDPKVLVFVET-TYSGLGRDIAELLVYN 266
>AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB
protein.
Length = 1003
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +2
Query: 473 PPQTLPAPHSTTRSSYGPTSHGHGGRC 553
PP LP P ++ SS +SHGHG C
Sbjct: 881 PP--LPPPRPSSSSSSSRSSHGHGHNC 905
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,812,236
Number of Sequences: 53049
Number of extensions: 671169
Number of successful extensions: 2731
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2727
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -