Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021219
         (776 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione S-tran...    25   3.5  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    24   4.6  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   8.0  
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    23   8.0  

>AY063776-1|AAL59658.1|  224|Anopheles gambiae glutathione
           S-transferase E1 protein.
          Length = 224

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -2

Query: 583 SQILASREESITELFLDGHKPSVCTNKM-YVQSLY 482
           S +L +R   ITEL + G KP +  +++ YV+  Y
Sbjct: 107 SGVLFARLRFITELAIFGRKPEIPEDRIEYVRKAY 141


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -3

Query: 507 IKCMSNPCMLVTYWGYLFKNISLSLKGYSSAQNRSQP 397
           I C S+ C+ + YW       S +   Y  A+NRS P
Sbjct: 128 IYCCSHLCLAIFYW---VAPSSSTYLAYLGARNRSVP 161


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -2

Query: 292 IMENNFKGSYAGILWYFVH 236
           I++  F+G+Y  +LW   H
Sbjct: 418 ILQTRFEGTYKAVLWLREH 436


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +1

Query: 568 WPGSVREFYETIPHLTSVNKSRDFAVEVIAPTLP 669
           WP  +     T+P    V+   D+ ++V+ P  P
Sbjct: 42  WPLQLSGVCCTVPRCWQVSLDSDYQIDVVLPLPP 75


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 860,155
Number of Sequences: 2352
Number of extensions: 18585
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)