Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021219
         (776 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   5.5  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    22   7.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   7.3  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   9.7  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
 Frame = +3

Query: 213 PNAWWGPECTKYHNIPAYD---PLKLFSMI 293
           PN  W  +C  ++  P Y       LF MI
Sbjct: 181 PNVTWYSQCVTFNAFPTYTHEITYSLFGMI 210


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +3

Query: 501 ILLVQTEGLCPSRNSSVIDSSRLARICEGI 590
           ++L +T   CP   ++V  ++ + R+ EGI
Sbjct: 69  VVLAKTIAECPESENTVQKAALVLRLREGI 98


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 225 WGPECTKYHN 254
           WG EC KY N
Sbjct: 371 WGAECGKYPN 380


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/40 (25%), Positives = 18/40 (45%)
 Frame = +3

Query: 483 YRDWTYILLVQTEGLCPSRNSSVIDSSRLARICEGILRNN 602
           Y DW++       G+  +   +V    RL  +  G++ NN
Sbjct: 113 YPDWSFAKYEDCSGIVSAFKIAVDKFDRLWVLDSGLVNNN 152


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,277
Number of Sequences: 438
Number of extensions: 6069
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)