Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021216
(688 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 2e-14
SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_16900| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 68 8e-12
SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_58990| Best HMM Match : SH3_1 (HMM E-Value=1.7e-14) 54 1e-07
SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0) 38 6e-07
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 46 2e-05
SB_6049| Best HMM Match : SH2 (HMM E-Value=8.4e-30) 43 2e-04
SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 43 2e-04
SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07) 42 4e-04
SB_7446| Best HMM Match : SH2 (HMM E-Value=2.7e-22) 42 5e-04
SB_37681| Best HMM Match : SH2 (HMM E-Value=3.5e-11) 42 5e-04
SB_30777| Best HMM Match : SH2 (HMM E-Value=4e-10) 42 5e-04
SB_41533| Best HMM Match : SH2 (HMM E-Value=6.3e-25) 41 0.001
SB_18647| Best HMM Match : SH2 (HMM E-Value=7.3e-16) 41 0.001
SB_51792| Best HMM Match : SH2 (HMM E-Value=6.3e-24) 40 0.002
SB_34759| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_17929| Best HMM Match : SH2 (HMM E-Value=5e-08) 38 0.006
SB_55759| Best HMM Match : SH2 (HMM E-Value=0.082) 37 0.013
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 37 0.018
SB_5212| Best HMM Match : SH3_1 (HMM E-Value=4.9e-20) 36 0.041
SB_50467| Best HMM Match : SH3_1 (HMM E-Value=1e-12) 36 0.041
SB_15740| Best HMM Match : SH2 (HMM E-Value=8.1e-18) 35 0.054
SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0) 35 0.054
SB_8390| Best HMM Match : SH2 (HMM E-Value=0.00091) 35 0.054
SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20) 34 0.094
SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24) 34 0.12
SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38) 34 0.12
SB_10886| Best HMM Match : SH3_1 (HMM E-Value=2.8e-19) 34 0.12
SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41) 33 0.22
SB_40386| Best HMM Match : BAR (HMM E-Value=0) 33 0.22
SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06) 33 0.22
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 33 0.29
SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33) 33 0.29
SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33) 32 0.38
SB_5826| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.38
SB_48515| Best HMM Match : SH2 (HMM E-Value=3.1) 32 0.50
SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23) 32 0.50
SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24) 31 0.87
SB_20094| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13) 30 2.0
SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40) 30 2.0
SB_51507| Best HMM Match : SH2 (HMM E-Value=2.3e-22) 30 2.0
SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0) 30 2.0
SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16) 30 2.0
SB_27771| Best HMM Match : SH2 (HMM E-Value=8.6e-16) 29 2.7
SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038) 29 2.7
SB_54640| Best HMM Match : TolA (HMM E-Value=1.7) 29 2.7
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 28 6.2
SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
>SB_33662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 509
Score = 76.2 bits (179), Expect = 2e-14
Identities = 41/95 (43%), Positives = 60/95 (63%), Gaps = 7/95 (7%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAE--LDGKEGLIPSNYI----QMKNHSWYYGRITRADAEK 406
F K + L+++N D +W++A + + G IPSNY+ +++ W++G I R DAEK
Sbjct: 80 FKKGEKLEVVNDLDGGDWWQARSLVSNQVGYIPSNYVAPQSSLQSEEWFFGAIRRVDAEK 139
Query: 407 LLANKPEGG-FLIRISESSPGDFSLSVKCPDGVQH 508
LL E G FLIR SES PGD+SLS++ D V+H
Sbjct: 140 LLIMHGESGSFLIRESESKPGDYSLSLRDGDNVKH 174
>SB_33664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 75.8 bits (178), Expect = 3e-14
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 7/95 (7%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAELD-GKEGLIPSNYI----QMKNHSWYYGRITRADAEK- 406
F K + L++L+ D W L +EG IPSNY+ +K+ W++G+I RA+AEK
Sbjct: 96 FKKGERLQLLDNTDGDWWLAKSLSTDQEGYIPSNYVAPEMSVKSQDWFFGKIKRAEAEKK 155
Query: 407 LLA-NKPEGGFLIRISESSPGDFSLSVKCPDGVQH 508
LLA P+G FLIR SE+ PG+FSLSV+ D V+H
Sbjct: 156 LLAPGNPKGTFLIRDSETQPGNFSLSVRDGDNVKH 190
>SB_16900| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 451
Score = 70.5 bits (165), Expect = 1e-12
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Frame = +2
Query: 263 LKILNMEDDMNWYRAE-LDGKEGLIPSNYIQ----MKNHSWYYGRITRADAEKLLANKPE 427
L +L D W + L G+ G +PS+YI+ ++ HSWY+G+I+R AE LL++
Sbjct: 63 LIVLRYNDTREWCEGQSLSGQLGWVPSSYIKPVNSLEKHSWYHGQISRNAAEYLLSSGIN 122
Query: 428 GGFLIRISESSPGDFSLSVKCPDGVQH 508
G FL+R SESSPG S+S++ + V H
Sbjct: 123 GSFLVRESESSPGQLSISLRYDERVYH 149
>SB_40820| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 526
Score = 67.7 bits (158), Expect = 8e-12
Identities = 41/97 (42%), Positives = 57/97 (58%), Gaps = 9/97 (9%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAE-LDGKEGLIPSNYIQM------KNHS--WYYGRITRAD 397
F K +VL I D NWYRA G GLIP NY+Q+ K H+ W++G+I R
Sbjct: 153 FKKGEVLVIERDTRDPNWYRARNKTGVIGLIPVNYVQVLERGAVKLHAMPWFHGKIEREK 212
Query: 398 AEKLLANKPEGGFLIRISESSPGDFSLSVKCPDGVQH 508
+E+LL + +G FL+R S + GD++LSV C V+H
Sbjct: 213 SEELLQPRTDGLFLVRESRNYVGDYTLSVCCNGKVEH 249
>SB_33663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 60.5 bits (140), Expect = 1e-09
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 9/97 (9%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMN-WYRAEL--DGKEGLIPSNYIQ----MKNHSWYYGRITRADAE 403
F K +VL++ N +D N W+RA+ G EG IP NY+ ++ W+YG I R +AE
Sbjct: 89 FKKGEVLEV-NPDDLANDWWRAKSRDTGAEGYIPMNYVAPMETLEAEEWFYGPIKRPEAE 147
Query: 404 KLLANKP--EGGFLIRISESSPGDFSLSVKCPDGVQH 508
KLL + P G FLIR +S+ G F+LS++ D ++H
Sbjct: 148 KLLQSPPNEHGAFLIR--DSNKGLFALSMRDGDMIKH 182
>SB_58990| Best HMM Match : SH3_1 (HMM E-Value=1.7e-14)
Length = 167
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYIQMKNH 364
F K +KILN + D NWY+AE+DG G+IP+NYI++K H
Sbjct: 19 FKKAVFVKILNKDVDENWYQAEMDGNSGMIPANYIELKPH 58
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 192 MEALAKHDFTATADDELSFRKIKY*K 269
MEA+AKHDF AT DE+SF+K + K
Sbjct: 1 MEAVAKHDFNATCSDEVSFKKAVFVK 26
>SB_10902| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 824
Score = 37.9 bits (84), Expect(2) = 6e-07
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +2
Query: 329 LIPSNY-IQMKNHSWYYGRITRADAEKLLANK-PEGGFLIRISESS 460
++PS+ + N W++GRI+R E+LL N +G FL+R SE++
Sbjct: 362 ILPSHQGLPFVNQEWFWGRISRRQGEQLLLNHGTDGDFLVRESETT 407
Score = 33.1 bits (72), Expect(2) = 6e-07
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 245 F*KNQVLKILNMED-DMNWYRAEL-DGKEGLIPSNYIQ 352
F K +VL ++ D D +W+ A+ DG +GL+P NY++
Sbjct: 287 FEKGEVLDVIKQPDGDPDWWFAKKQDGSKGLVPKNYVK 324
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 266 KILNMEDDMNWYRAELDGK-EGLIPSNYIQMKN 361
K++ ++D W++ D EG +PSNY+ K+
Sbjct: 127 KLVIVDDSQTWWKVRNDQNVEGYVPSNYVGRKD 159
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +2
Query: 365 SWYYGRITRADAEKLLANKP-EGGFLIRISESSPGDFSLSVKCPDGVQHSK 514
+W++ ++ DAE+LL + G +L+R S+S+PGDF+LSV+ V H K
Sbjct: 479 TWFHSNVSGHDAERLLIERGLHGSYLVRPSKSNPGDFTLSVRRNGDVTHIK 529
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 395 DAEKLLANKPEGG-FLIRISESSPGDFSLSVKCPDGVQH 508
+ E +L +K + G FL+R S+S PGD+ L+ +C D + H
Sbjct: 587 EGETVLLDKGKNGSFLVRESQSKPGDYVLTARCDDRITH 625
>SB_6049| Best HMM Match : SH2 (HMM E-Value=8.4e-30)
Length = 94
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Frame = +2
Query: 368 WYYGRITRADAEKLLANKP--EGGFLIRISESSPGDFSLSVKCPDGVQH 508
W+YG I R +AEKLL + P G FLIR +S+ G F+LS++ D ++H
Sbjct: 2 WFYGPIKRPEAEKLLQSPPNEHGAFLIR--DSNKGLFALSMRDGDMIKH 48
>SB_26266| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1038
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 335 PSNYIQMKNHSWYYGRITRADAEKLLANKPEGGFLIRISESSPGDFSLSVKCPDGVQH 508
P I +++ W++G I R D +K L K +G +L+R S + PG F LS + ++H
Sbjct: 397 PPEDIPLQDEPWFHGIIQRKDVDKRL--KSDGEYLVRESATKPGQFVLSARSDGALRH 452
>SB_58219| Best HMM Match : SOCS_box (HMM E-Value=2e-07)
Length = 507
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +2
Query: 332 IPSNYIQMKNHSWYYGRITRADAEKLLANKPEGGFLIRISESSPGDFSLSVKCPDGVQHS 511
+ S+ + N WY+G ++ +AEK L N+P+G FL+R SE+ S+S + H+
Sbjct: 333 LSSSLKTLSNCGWYWGPMSSKEAEKELYNQPDGCFLVRDSENDYHLLSVSFRSKGATCHT 392
Query: 512 K 514
+
Sbjct: 393 R 393
>SB_7446| Best HMM Match : SH2 (HMM E-Value=2.7e-22)
Length = 699
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +2
Query: 368 WYYGRITRADAEKLLANKPEGGFLIRISESSPGDFSLS 481
WY+G I+R +AE LL + EG FL+R S+S PG + LS
Sbjct: 449 WYHGPISRGEAELLLED--EGDFLVRESKSQPGQYVLS 484
>SB_37681| Best HMM Match : SH2 (HMM E-Value=3.5e-11)
Length = 421
Score = 41.9 bits (94), Expect = 5e-04
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +2
Query: 302 RAELDGKEGLIPSNYIQMKNHSWYYGRITRADAEKLLANKPEGGFLIRISESSPGDFSLS 481
RAE E + +++ N WY+G+I R +AE++L P+G FL+R S FS+S
Sbjct: 236 RAEQTRIEYYFIRDLLEITNCPWYWGKINRFEAERVLDGLPDGTFLLRDSAQYQYLFSVS 295
Query: 482 VK 487
+
Sbjct: 296 FR 297
>SB_30777| Best HMM Match : SH2 (HMM E-Value=4e-10)
Length = 265
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +2
Query: 311 LDGKEGLIPSNYIQMKNHSWYYGRITRADAEKLLANKPEGGFLIRISESSPGDFSLSVKC 490
LD + + ++ + W++G + DAE++LA +P+G FL+R S +S +SV+
Sbjct: 152 LDSQTRDLSRGFMNLSEQGWFWGAMRYEDAEQVLAGRPDGSFLVRDSTNSFDLLVVSVRS 211
Query: 491 PDGVQH 508
H
Sbjct: 212 QSTTIH 217
>SB_41533| Best HMM Match : SH2 (HMM E-Value=6.3e-25)
Length = 389
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 275 NMEDDMNWYRAELDGKEGLIPSNYIQMKNHSWYYGRITRADAE-KLLANKPEGGFLIRIS 451
N ED++ +L+ +E I + + WY+G++ R E +L A+ G +L+R S
Sbjct: 26 NFEDEIG---LDLEDEEHNIELSLSAPPDDRWYHGKLDRKTCEERLAADGRIGAYLVRES 82
Query: 452 ESSPGDFSLSVKCPDGVQH 508
+ P FSLS +G+ H
Sbjct: 83 DRKPATFSLSYLGKNGIVH 101
>SB_18647| Best HMM Match : SH2 (HMM E-Value=7.3e-16)
Length = 720
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 365 SWYYGRITRADAEKLLANKPE-GGFLIRISESSPGDFSLSVKCPDGVQH 508
+W++ I R + EKLL E GGFLIR SES P F LS+ + H
Sbjct: 4 TWHHKAINRLETEKLLLGCGEDGGFLIRDSESIPNAFVLSILFQGHIHH 52
>SB_51792| Best HMM Match : SH2 (HMM E-Value=6.3e-24)
Length = 189
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +2
Query: 362 HSWYYGRITRADAEKLLAN--KPEGGFLIRISESSPGDFSLSV 484
H+W++G ++R A +L K EG FL+R S++ PGD+ LS+
Sbjct: 7 HAWFHGEMSREAAVDILVKHGKKEGLFLVRESKTIPGDYVLSL 49
>SB_34759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 356 KNHSWYYGRITRADAEKLLANKPEGGFLIRISESSPGDFSLSVKCPDGVQHSKY 517
+N WY I R ++L EG F +R S+S PG +L+V+ P V S +
Sbjct: 497 QNEYWYMPGIPREFIMEMLQASEEGSFFVRDSQSKPGCHALTVRVPTEVHASGF 550
>SB_17929| Best HMM Match : SH2 (HMM E-Value=5e-08)
Length = 170
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 356 KNHSWYYGRITRADAEKLLANKPEGGFLIRISESSPGDFSLSVKCPDGVQHSKY 517
+N WY I R ++L EG F +R S+S PG +L+V+ P V S +
Sbjct: 34 QNEYWYMPGIPREFIMEMLQASEEGSFFVRDSQSKPGCHALTVRVPTEVHASGF 87
>SB_55759| Best HMM Match : SH2 (HMM E-Value=0.082)
Length = 42
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 368 WYYGRITRADAEKLLANKPEGG-FLIRISESSPGDFSLS 481
W++G ++ + E +L +K + G FL+R S+S PGD+ L+
Sbjct: 2 WFHGHMSSKEGETVLLDKGKNGSFLVRESQSKPGDYVLT 40
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 36.7 bits (81), Expect = 0.018
Identities = 16/47 (34%), Positives = 32/47 (68%)
Frame = +2
Query: 368 WYYGRITRADAEKLLANKPEGGFLIRISESSPGDFSLSVKCPDGVQH 508
+++G I+R DAE++L +K G FL+R+SE G ++++ + + +H
Sbjct: 803 YFHGIISRQDAEQVLLDKVPGSFLVRVSERVWG-YTITYRAEERCKH 848
>SB_5212| Best HMM Match : SH3_1 (HMM E-Value=4.9e-20)
Length = 300
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYIQ 352
F K V + M D W++ EL+G+ G+ PSNY+Q
Sbjct: 253 FYKGSVFNV--MSKDGEWWKGELNGQVGMFPSNYVQ 286
>SB_50467| Best HMM Match : SH3_1 (HMM E-Value=1e-12)
Length = 132
Score = 35.5 bits (78), Expect = 0.041
Identities = 15/38 (39%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRA-ELDGKEGLIPSNYIQM 355
F K +L +++ E+D NW++A + G+EG+IP Y+Q+
Sbjct: 55 FKKGDILTVISKEED-NWWKARDSAGREGMIPKPYVQV 91
>SB_15740| Best HMM Match : SH2 (HMM E-Value=8.1e-18)
Length = 453
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 371 YYGRITRADAEKLLANKP---EGGFLIRISESSPGDFSLSVKCPDGVQH 508
++G+I+R +LL G FL+R S S+PGD+SLS+ V+H
Sbjct: 59 FHGKISREQVVELLTGAGGTVNGRFLVRESLSAPGDYSLSLTFGGEVEH 107
>SB_37165| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 1034
Score = 35.1 bits (77), Expect = 0.054
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +2
Query: 251 KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYIQMKNHSWYYGR 382
+ +LK+L+ D+ +WY EL+ K+GL P +Y + ++S+ R
Sbjct: 84 EGDILKVLSHFDE-HWYNCELNSKKGLFPISYTEKIDNSYTIDR 126
>SB_8390| Best HMM Match : SH2 (HMM E-Value=0.00091)
Length = 396
Score = 35.1 bits (77), Expect = 0.054
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 365 SWYYGRITRADAEKLLANKPEGGFLIRISESSPGD--FSLSVKCPD 496
SW+ G + ++E+LL + G FLIR S S D F L+VK D
Sbjct: 329 SWFAGHMDETESERLLRDLSPGHFLIRFSTSRADDGFFVLAVKTRD 374
>SB_39120| Best HMM Match : SH3_1 (HMM E-Value=2e-20)
Length = 524
Score = 34.3 bits (75), Expect = 0.094
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 281 EDDMNWYRAEL-DGKEGLIPSNYIQMK 358
+D+ NW+ EL DG++G PSNYI K
Sbjct: 339 QDNENWWMGELADGRQGYFPSNYIMEK 365
>SB_54886| Best HMM Match : SH3_2 (HMM E-Value=3.2e-24)
Length = 440
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYIQ 352
F K QV+ IL + +Y+A++ G+ GL+P+++++
Sbjct: 391 FKKGQVVTILGPMNSDGYYQADISGRRGLVPASFVE 426
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYIQ 352
F + +L++ + +Y L K+GLIPSN+++
Sbjct: 281 FREGDILRVEDTSRKDGFYFGSLQDKKGLIPSNFVE 316
>SB_39302| Best HMM Match : SH3_2 (HMM E-Value=1.9e-38)
Length = 2084
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYIQ 352
F K QV+ IL + +Y+A++ G+ GL+P+++++
Sbjct: 1939 FKKGQVVTILGPMNSDGYYQADISGRRGLVPASFVE 1974
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYIQ 352
F + +L++ + +Y L K+GLIPSN+++
Sbjct: 1829 FREGDILRVEDTSRKDGFYFGSLQDKKGLIPSNFVE 1864
>SB_10886| Best HMM Match : SH3_1 (HMM E-Value=2.8e-19)
Length = 152
Score = 33.9 bits (74), Expect = 0.12
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +2
Query: 269 ILNMEDDMNWYRAELDGKEGLIPSNYIQMK 358
I+ + D NW E++G+ G+ P+NY++++
Sbjct: 12 IVKRQIDRNWIEGEVNGRIGIFPTNYVELR 41
Score = 30.7 bits (66), Expect = 1.2
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +2
Query: 287 DMNWYRAELDGKEGLIPSNYIQM 355
D NWY A + ++G++P+ Y+++
Sbjct: 93 DANWYEASVGNQKGIVPTQYLEV 115
>SB_55426| Best HMM Match : SH3_1 (HMM E-Value=1.90002e-41)
Length = 689
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYIQM 355
F KN ++ I +D W+ EL+GK+G P Y+++
Sbjct: 154 FNKNDIIAIKEQQD--TWWSGELNGKKGWFPKTYVKL 188
>SB_40386| Best HMM Match : BAR (HMM E-Value=0)
Length = 369
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYIQM 355
F + Q++ + DD WY LDGK G+ PS +Q+
Sbjct: 323 FTEGQIITLSGKRDD-EWYEGTLDGKFGIFPSALVQI 358
>SB_42044| Best HMM Match : ubiquitin (HMM E-Value=1.2e-06)
Length = 1425
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +2
Query: 350 QMKNHSWYYGRITRADAEKLLANKPEGGFLIRISESSPGDFSLSVK 487
Q++ W++G+IT AE L+ + G FL+R + PG + ++V+
Sbjct: 312 QLEKSPWFHGKITAEYAEMLM--RGAGEFLVREDPAMPGMYFIAVR 355
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 350 QMKNHSWYYGRITRADAEKLL-ANKPEGGFLIRISESSPGDFSLSVKCPDG 499
++++ WYYG + +AE+LL + + G I + +++L+VK P+G
Sbjct: 2940 KIEHAPWYYGNMNTTEAEELLEVHALQPGTFILHDGIATDEYTLTVKAPEG 2990
>SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33)
Length = 997
Score = 32.7 bits (71), Expect = 0.29
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Frame = +2
Query: 275 NMEDDMNWYRAELDGKEGLIPSNYIQMK-NHSWYYGRIT--RADAEKLLA--NKPEGGFL 439
N EDD + LDG G+ S+ ++ W++G++ R AE+ L N+ +G FL
Sbjct: 23 NQEDD-DEDEGFLDGV-GVGESSKDELHYGEKWFHGKLPDGRRVAEQYLNQFNRGDGSFL 80
Query: 440 IRISESSPGDFSLS 481
+R S + GDFSLS
Sbjct: 81 VRESTTFVGDFSLS 94
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +2
Query: 368 WYYGRITRADAEKLLAN-KPEGGFLIRISE----SSPGDFSLSVKCPDGVQHSK 514
WY+ +TR+ AE +L + +G FL+R E + +++S + ++H K
Sbjct: 97 WYHDNLTRSAAEDMLKRVRKDGAFLVRRRERDDRTGEESYAISFRAEKKIKHCK 150
>SB_50893| Best HMM Match : SH3_1 (HMM E-Value=2e-33)
Length = 665
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 284 DDMNWYRAELDGKEGLIPSNYIQM 355
D W ELDGK GL P N++++
Sbjct: 250 DTPGWMEGELDGKTGLFPDNFVEI 273
Score = 31.1 bits (67), Expect = 0.87
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = +2
Query: 281 EDDMNWYRAELDGKEGLIPSNYIQMK 358
E + W+ +DG++G+ PSN++++K
Sbjct: 35 EVEDGWWEGTVDGRKGVFPSNFVKLK 60
>SB_5826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 32.3 bits (70), Expect = 0.38
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2
Query: 287 DMNWYRAELDGKEGLIPSNYIQ 352
D NW+ +++G +G +PSNY++
Sbjct: 237 DENWFEGQVNGCQGFLPSNYVE 258
>SB_48515| Best HMM Match : SH2 (HMM E-Value=3.1)
Length = 40
Score = 31.9 bits (69), Expect = 0.50
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 371 YYGRITRADAEKLLANKPEGGFLIRISESSPGDFSLSV 484
+ G++ R +AE+ + +G FL+R S + G+++LSV
Sbjct: 2 FAGKMDRTEAEQETMGRSDGTFLVRESANRAGEYALSV 39
>SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23)
Length = 936
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAEL--DGKEGLIPSNY 346
F K +++L+ EDD NW++ + G+EGL P NY
Sbjct: 19 FKKGNHIEVLDKEDD-NWWKGRVAETGEEGLFPRNY 53
>SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24)
Length = 581
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 251 KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYI 349
K V+ +LN +DD W+ G EG +P +Y+
Sbjct: 329 KGDVVNVLNRDDDDWWWVTTPRGGEGFVPCSYL 361
>SB_20094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 11/51 (21%)
Frame = +1
Query: 538 FFLWVVKFNSLNELVDYHRTASVSR-----------LQDVKLRDVVPEKCW 657
+FLWV+ F E++DY R + VS+ +Q++KL + +K W
Sbjct: 58 YFLWVILFLKRREVLDYKRFSEVSQEQSKVIELINGMQEIKLHNAEKQKRW 108
>SB_52289| Best HMM Match : SH3_1 (HMM E-Value=3.5e-13)
Length = 803
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYI 349
F + +++ L EDD W EL+GK+G+ P ++
Sbjct: 382 FKASDIIRFLYEEDD-TWCCGELNGKKGMFPKEFV 415
>SB_51657| Best HMM Match : SH3_1 (HMM E-Value=2.69999e-40)
Length = 313
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 257 QVLKILNMEDDMNWYRAELDGKEGLIPSNYIQM 355
Q+L+I+N DD W + L+G G+ PS+Y+++
Sbjct: 212 QLLEIVN--DD--WLKGSLNGNTGIFPSSYVEL 240
>SB_51507| Best HMM Match : SH2 (HMM E-Value=2.3e-22)
Length = 192
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +2
Query: 368 WYYGRITRADAEKLLAN-KPEGGFLIRISE----SSPGDFSLSVKCPDGVQHSK 514
WY+ +TR+ AE +L + +G FL+R E + +++S + ++H K
Sbjct: 2 WYHDNLTRSAAEDMLKRVRKDGAFLVRRRERDDRTGEESYAISFRAEKKIKHCK 55
>SB_43644| Best HMM Match : SH3_1 (HMM E-Value=0)
Length = 704
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYIQMKNHS 367
F K +++L+ + WY ++DG EG IPS+Y+ + S
Sbjct: 219 FSKGASVEVLDKNPNGWWY-GKIDGNEGWIPSSYLGKREKS 258
>SB_18821| Best HMM Match : SH3_1 (HMM E-Value=5.7e-16)
Length = 299
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYIQ 352
F +++ L+ DD W R ++ + GL P+ Y++
Sbjct: 262 FKAGEIVTKLSERDDQGWCRGRINHRTGLFPAEYVE 297
>SB_27771| Best HMM Match : SH2 (HMM E-Value=8.6e-16)
Length = 896
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 404 KLLANKPEGGFLIRISESSPGDFSLSVKCPDGVQHSK 514
K + N +G FL+R S P D+S+S+ V+H K
Sbjct: 262 KGIFNFQDGAFLVRNSTRHPNDYSMSLLYKGDVRHLK 298
>SB_20181| Best HMM Match : RhoGEF (HMM E-Value=0.038)
Length = 274
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 287 DMNWYRAELDGKEGLIPSNYIQ 352
D W+ L+GK G PSNY++
Sbjct: 3 DGGWWEGTLNGKNGWFPSNYVK 24
>SB_54640| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 589
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 499 CPALKVLRDASSKFFLWVVK-FNSLNELVDYHRTASVSRLQDVKLRDVVPE 648
CP + V RD + +WV K + +EL Y ++R QD+ L + P+
Sbjct: 109 CPTMSVSRDITKNLQVWVEKNIDKYSEL--YDELMDINREQDLYLESMDPK 157
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 263 LKILNMEDDMNWYRAEL-DGKEGLIPSNYIQ 352
L I D+ +Y EL DG+ GL+PSN+++
Sbjct: 967 LYIFGDVDEDGFYVGELMDGQRGLVPSNFVE 997
>SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1622
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 245 F*KNQVLKILNMEDDMNWYRAELDGKEGLIPSNYI 349
F K Q L +L+ E +W+ EL+G G IP +Y+
Sbjct: 66 FEKGQKLVVLSKETK-DWWWVELEGSCGYIPVSYV 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,646,297
Number of Sequences: 59808
Number of extensions: 376043
Number of successful extensions: 770
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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