Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021216
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            27   0.55 
AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A prot...    24   5.2  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   5.2  

>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 27.1 bits (57), Expect = 0.55
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 377 GRITRADAEKLLANKPEGGFLIRISESSPGDFSLS 481
           G I ++ AEK LA    G FL+R ++S  G  S++
Sbjct: 552 GFIHKSTAEKYLAKCVPGTFLLRFTDSVLGGISIA 586


>AY344825-1|AAR02436.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 380 AHNTNCDFSFVCNY 339
           AH+T+CD   +CN+
Sbjct: 35  AHSTDCDKFLICNH 48


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/36 (25%), Positives = 21/36 (58%)
 Frame = +3

Query: 465 VTSPYQSNVRTVSSTQSIKRRLEQVLPLGRQVQFAQ 572
           +T+  Q      +  ++ K RLE+ + +G++ +FA+
Sbjct: 333 LTTDLQERSLAAAEHRTAKTRLEKAIKVGKRAEFAK 368


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,552
Number of Sequences: 2352
Number of extensions: 11936
Number of successful extensions: 63
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)