Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021214
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    26   0.35 
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    24   1.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    24   1.4  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   1.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.5  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   5.7  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 124 QILSDALKSKCRQCQHKE 177
           ++L DALKS C +C  K+
Sbjct: 60  RVLPDALKSDCAKCSEKQ 77


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +1

Query: 430 TGMHSMARYIVLITTMVDGLDSGVRLWELRIS---TGCCMQRFY 552
           +GM+SM   ++L+TT+V    S   + +  IS    G  M  FY
Sbjct: 278 SGMYSMYCLLILLTTIVASYGSVTEIMDQGISFKEAGLFMIAFY 321


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +1

Query: 430 TGMHSMARYIVLITTMVDGLDSGVRLWELRIS---TGCCMQRFY 552
           +GM+SM   ++L+TT+V    S   + +  IS    G  M  FY
Sbjct: 278 SGMYSMYCLLILLTTIVASYGSVTEIMDQGISFKEAGLFMIAFY 321


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = -2

Query: 202 SSAEARSTTPCADTDDILTLTRRIVSAGRPPPDAPCSQPGHCATL 68
           S ++A    P  D D++ +     V +GR    + C + GHC  L
Sbjct: 4   SESKAICDNPPCD-DEVESCIAVGVGSGRNSAPSICGEHGHCVNL 47



 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +1

Query: 226 GCAAVSVPPVCGAYGQC 276
           G    S P +CG +G C
Sbjct: 28  GSGRNSAPSICGEHGHC 44


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +1

Query: 640 LFGSSCPCYWLKKVYYN--R*GARS 708
           LF     C+W+ K+ YN  R GA S
Sbjct: 362 LFSIGFNCFWVMKLLYNVLRFGAES 386


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 493 SGVRLWELRISTGCCMQ 543
           SG ++W++  S  CC +
Sbjct: 76  SGSKIWQMERSCMCCQE 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,237
Number of Sequences: 336
Number of extensions: 3679
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)