Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021214
(710 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0138 + 26865895-26865953,26866628-26867870 39 0.003
02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735 31 0.68
02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783 31 0.90
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 31 1.2
03_02_0915 + 12360079-12360095,12360225-12361353 30 1.6
12_02_0585 + 20824752-20825954,20826141-20826329,20826533-208266... 30 2.1
08_01_0637 + 5537421-5539547 29 2.8
02_02_0333 + 9042393-9043610 29 2.8
01_06_1424 - 37269397-37270299 29 3.6
01_05_0148 + 18609853-18610058,18610347-18612669 29 3.6
01_01_0367 + 2872650-2873045,2873800-2873940,2874255-2874364,287... 29 3.6
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 29 4.8
06_03_0804 + 24761974-24763196,24763674-24764019 29 4.8
04_04_1060 - 30473509-30473619,30473815-30473850,30474063-304740... 29 4.8
08_02_1105 + 24344656-24345513,24346774-24347149,24348089-24348204 28 6.4
08_02_0792 + 21233578-21233710,21233807-21233936,21234097-21234766 28 6.4
04_04_1012 - 30104401-30104955,30105066-30106841 28 6.4
04_04_1005 - 30043698-30044252,30044363-30046138 28 6.4
03_02_0609 - 9823120-9823573,9823903-9824102,9824240-9824335,982... 28 6.4
03_02_0504 - 8976973-8979414 28 6.4
01_05_0802 + 25363556-25364011 28 6.4
10_08_0545 - 18673640-18674249,18674579-18674934 28 8.4
07_03_1474 - 26766078-26766536,26766634-26766885,26767201-267674... 28 8.4
03_05_0224 - 22099472-22099813,22100496-22101032 28 8.4
02_02_0742 - 13605125-13605539,13605964-13606246,13606457-13606604 28 8.4
>01_06_0138 + 26865895-26865953,26866628-26867870
Length = 433
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +2
Query: 362 ILDDRFLEKFFLFFNSVDRRTLAQVCTRWRDILYSSPRWWTGLI 493
++ D LE+ F F V VC RW DI+YSS WT ++
Sbjct: 73 VVPDDILERIFTFLPIVSMIRSTAVCKRWHDIIYSSRFLWTHML 116
>02_05_0498 - 29520062-29520758,29521552-29521860,29523525-29524735
Length = 738
Score = 31.5 bits (68), Expect = 0.68
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = -2
Query: 448 PSSAYLCKGSPVNRIKKQKKLF*KSVIQNKLIPKKRSR*GSPAARNARGCGRSRSTECIG 269
P S+ LC P ++ F K V +N + +R R + ARNA G S G
Sbjct: 388 PMSSKLCVQDPSKDYSREWG-FEKLVFRNSITKVRRDRKYAIQARNAYSAGVHMSQNVYG 446
Query: 268 HTLHKLGERLR 236
T HK +R
Sbjct: 447 RTTHKTESLIR 457
>02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783
Length = 1439
Score = 31.1 bits (67), Expect = 0.90
Identities = 23/58 (39%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 93 EQGASGGGRPADTI---RRVKVKMSSVSAQGVVERASAELSRRITGLGLRGRKRSPSL 257
E+ G GR A + RR + + S S R AE SRR T R R RSPSL
Sbjct: 63 EEAPRGSGRRAAPVVASRRRRRRSRSRSRSPRAARPRAESSRRPTARRARARARSPSL 120
>03_06_0353 -
33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 30.7 bits (66), Expect = 1.2
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = -2
Query: 613 YHHPKQILKRHHEYLF-SSANCRNAACNTR*IYVVPTI*HRYQARPPSW**VQY--IAPS 443
YHH +Q HH+ L SSA +N N + VP A P + +Q+ +AP+
Sbjct: 75 YHHQQQQQYHHHQQLLHSSAYHQNPTHNLQHRAAVPA-----PAAPAAAPSIQHRPVAPA 129
Query: 442 SAYLCKGSPVNRIKKQKK 389
+A G P + KK++K
Sbjct: 130 TAAAAPGQPQPKKKKKQK 147
>03_02_0915 + 12360079-12360095,12360225-12361353
Length = 381
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 202 SSAEARSTTPCADTDDILTLTRRIVSAGRPPPDAPCSQPGHC 77
SS+++ +T+ A+ DD ++ A + +AP SQ GHC
Sbjct: 63 SSSDSGATSTGAEVDDEEKAISAVIDAAQLKWEAPTSQGGHC 104
>12_02_0585 +
20824752-20825954,20826141-20826329,20826533-20826690,
20826913-20827009,20827368-20827730,20829225-20829303,
20830180-20830286
Length = 731
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 145 LTRRIVSAGRPPPDAPCSQPGHCATLII 62
L+RRI +AG PP PCS+ H L +
Sbjct: 186 LSRRIAAAGSPPAVLPCSERLHTMRLAL 213
>08_01_0637 + 5537421-5539547
Length = 708
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 418 ENPCTGMHSMARYIVLITTMVDGLDSGVRLWELRISTGCCMQRFYNSL 561
E+ G HS+ R+ ++ + + G R+W LR + M + Y +L
Sbjct: 127 ESSIVGSHSLLRWATMLMFVAGVVKYGERVWALRCADSSQMAKNYRTL 174
>02_02_0333 + 9042393-9043610
Length = 405
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +2
Query: 362 ILDDRFLEKFFLFFNSVDRRTLAQVCTRWRDILYSSPRWWTGLI 493
+L D LEK F VC RW +I+++ + W+ ++
Sbjct: 43 VLPDDLLEKVLSFLPVASVIRSGSVCKRWHEIVHARRQTWSKMV 86
>01_06_1424 - 37269397-37270299
Length = 300
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2
Query: 473 RWWTGLIAVLDCG 511
RWW GL+AVL CG
Sbjct: 191 RWWRGLVAVLLCG 203
>01_05_0148 + 18609853-18610058,18610347-18612669
Length = 842
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +1
Query: 496 GVRLWELRISTGCCMQRFYNSLMRRGIRGVVLISASDDD 612
G+RLW+++ S C +R Y SL++ + I+ASD+D
Sbjct: 624 GLRLWKVKASL--C-ERLYESLLQMKCLSYLSITASDED 659
>01_01_0367 +
2872650-2873045,2873800-2873940,2874255-2874364,
2875279-2875390,2875959-2876030,2876605-2876696,
2877116-2877236,2877712-2877834,2877935-2878130,
2878221-2878408,2878553-2878624,2879336-2879434,
2880027-2880107,2880337-2880405,2880730-2880787,
2881181-2881347
Length = 698
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Frame = -2
Query: 244 RLRPRNPSPV---IRRESSAEARSTTPCADTDDILTLTRRIVSAGRPPPDAPCSQP 86
RL+P NPSP +RR S+T A T A PPP+ + P
Sbjct: 16 RLKPLNPSPTASHLRRLLLLSTASSTSSASCSPSPLRTLAATDAATPPPEEEAAAP 71
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 190 ARSTTPCADTDDILTLTRRIVSAGRPPPDAPCSQP 86
AR+ TP + DD+ T T +A PP AP S P
Sbjct: 63 ARAATPSSQADDVPTTT----TATSPPSSAPSSPP 93
>06_03_0804 + 24761974-24763196,24763674-24764019
Length = 522
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -2
Query: 385 F*KSVIQNKLIPKKRSR*GSPAARNARGCGRSRSTECIGHTLHKLGERLR 236
F K V +N + +R R + A+NA G S IG+T HK +R
Sbjct: 412 FEKLVFRNSITGVRRDRKYAIQAKNAYATGVHMSENVIGNTTHKTEHLIR 461
>04_04_1060 -
30473509-30473619,30473815-30473850,30474063-30474095,
30474246-30474335,30474466-30475215
Length = 339
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Frame = -2
Query: 349 KKRS--R*GSPAARNARGCGRSRSTECIGHTLHKLGERLRP----RNPSPV-IRRESSAE 191
+KRS R SP++ N S S+ + H+ R+R N V +RR+SS +
Sbjct: 126 RKRSLNRENSPSSPNGLSATSSSSSRTVSRPSHRAASRIRKADEGANAGAVNVRRDSSGD 185
Query: 190 ARSTTPCADTDDIL 149
R + D DD L
Sbjct: 186 TRRNSD-RDVDDFL 198
>08_02_1105 + 24344656-24345513,24346774-24347149,24348089-24348204
Length = 449
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 416 RRTLAQVCTRWRDILYSSPRWWTG 487
RR L VC RWR+++ S W G
Sbjct: 28 RRRLRLVCRRWRNVINSRAPVWRG 51
>08_02_0792 + 21233578-21233710,21233807-21233936,21234097-21234766
Length = 310
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 217 VIRRESSAEARSTTPCADTDDILTLTRRIVSAGRPPPDAP 98
V+ E+S +T P D + + T+ +AG PPP P
Sbjct: 235 VLSGEASHSGGATAPTPDGSTVTSKTKDEETAGAPPPPPP 274
>04_04_1012 - 30104401-30104955,30105066-30106841
Length = 776
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 256 KLGERLRPRNPSPVIRRESSAEARSTTPCADTDDILTLTRR---IVSAGRPPPDAPCSQP 86
++ + + P PSPV + + A A ++ D L + I S R PP +PC++P
Sbjct: 600 EIDDIVAPPPPSPVATQLAQAAASASPISTGVLDALFASPPQPIIASPPRSPPRSPCARP 659
Query: 85 GH 80
H
Sbjct: 660 LH 661
>04_04_1005 - 30043698-30044252,30044363-30046138
Length = 776
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 256 KLGERLRPRNPSPVIRRESSAEARSTTPCADTDDILTLTRR---IVSAGRPPPDAPCSQP 86
++ + + P PSPV + + A A ++ D L + I S R PP +PC++P
Sbjct: 600 EIDDIVAPPPPSPVATQLAQAAASASPISTGVLDALFASPPQPIIASPPRSPPRSPCARP 659
Query: 85 GH 80
H
Sbjct: 660 LH 661
>03_02_0609 -
9823120-9823573,9823903-9824102,9824240-9824335,
9824454-9824567,9824711-9824774,9825206-9825312
Length = 344
Score = 28.3 bits (60), Expect = 6.4
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = -2
Query: 349 KKRSR*GSPAARNARGCGRSRSTECIGHTLHKLGERL--RPRNPSPVIRRE-SSAEARST 179
+ RS GSP R R RSRS + + RNPSP RR S + R +
Sbjct: 197 RSRSLSGSPRGRRDRDDRRSRSLSYSRSPRRSISPAANGKERNPSPNGRRSPRSPQDRVS 256
Query: 178 TPCADTDD 155
P D D+
Sbjct: 257 PPPKDNDE 264
>03_02_0504 - 8976973-8979414
Length = 813
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = -2
Query: 256 KLGERLRPRNPSPVIRRESSAEARSTTPCADTDDILTLTRR---IVSAGRPPPDAPCSQP 86
++ + + P PSPV + + A A ++ D L + I S R PP +PC++P
Sbjct: 637 EIDDIVAPPPPSPVATQLAQAAASASPISTGVLDALFASPPQPIIASPPRSPPRSPCARP 696
Query: 85 GH 80
H
Sbjct: 697 LH 698
>01_05_0802 + 25363556-25364011
Length = 151
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 7/115 (6%)
Frame = -2
Query: 361 KLIPKKRSR*GSPAARNARGCGRSRSTECIGHTLHKL---GERLRPRNPSPVIRRESSAE 191
K++P+ ++ S + A R + + +L G+ +R R P E +
Sbjct: 16 KMVPEHKATSESTSTTTACSSVHIRCNATVKYASRRLRGNGKPVRDRQPDKPWTTEETRP 75
Query: 190 ARSTTPCADTDDILTLTRRIVSAGR----PPPDAPCSQPGHCATLIISFYDKSTC 38
A +T P +D + + + G P + PC H ++ FY +TC
Sbjct: 76 ASTTAPGSDEACGICREKFGMGGGAGASSDPVNLPCEHAFHANCVLAWFYKGNTC 130
>10_08_0545 - 18673640-18674249,18674579-18674934
Length = 321
Score = 27.9 bits (59), Expect = 8.4
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 365 LDDRFLEKFFLFFNSVDRRTLAQVCTRWRDILYSSPRWWTGLIAVLDCGNYV 520
+D L K F N V+ ++QVC W + S P W+ L L NY+
Sbjct: 14 MDTDVLVKIFKELNLVELSPVSQVCRLWH-LACSDPLIWSTLDFGLLKSNYI 64
>07_03_1474 -
26766078-26766536,26766634-26766885,26767201-26767401,
26767986-26768156,26768249-26768433,26768526-26768851,
26769430-26770631
Length = 931
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Frame = +3
Query: 177 VVERASAELSRR--ITGLGLRGRKRSPSLWSVWPMHSVDLLRPHPLAFRA 320
+V RA+A ++R I L+ S LW + +D RPHP++ A
Sbjct: 55 LVARAAAPFAKRAVIYERALKALPGSYKLWHAYLRERLDHARPHPISHHA 104
>03_05_0224 - 22099472-22099813,22100496-22101032
Length = 292
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/77 (20%), Positives = 32/77 (41%)
Frame = +3
Query: 63 IIKVAQWPGCEQGASGGGRPADTIRRVKVKMSSVSAQGVVERASAELSRRITGLGLRGRK 242
+++ A + G GG I R + + + + E A E+ ++ + GR+
Sbjct: 134 VVRPAANASSDGGGGGGESSCVNISRTRCYQQLDAMRSMCESARPEVKVKVCVMEAAGRE 193
Query: 243 RSPSLWSVWPMHSVDLL 293
R+P++ H LL
Sbjct: 194 RAPAVVEAARRHGASLL 210
>02_02_0742 - 13605125-13605539,13605964-13606246,13606457-13606604
Length = 281
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 6/72 (8%)
Frame = +3
Query: 75 AQWPGCEQGASGGG--RPADTIRRVKVKMSSVSAQGVVERASAELSRRITG----LGLRG 236
++W G GA GGG R + RR V + +A E++ + G GL G
Sbjct: 138 SRWRGLRGGARGGGHARRRRSTRRGGVPVPVKTATATTSATGLEVAPALEGGTRAFGLAG 197
Query: 237 RKRSPSLWSVWP 272
R +WP
Sbjct: 198 RGDGTRAGPIWP 209
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,990,716
Number of Sequences: 37544
Number of extensions: 439464
Number of successful extensions: 1831
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1830
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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