Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021214
(710 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z97653-1|CAJ55832.1| 479|Homo sapiens F-box and leucine-rich re... 57 7e-08
BC036680-1|AAH36680.1| 479|Homo sapiens F-box and leucine-rich ... 57 7e-08
AE006464-13|AAK61245.1| 581|Homo sapiens possible G-protein rec... 57 7e-08
X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein. 36 0.19
X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein. 36 0.19
M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein. 36 0.19
BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor, argini... 36 0.19
BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor, argini... 36 0.19
BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein. 36 0.19
BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein. 36 0.19
AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens ... 36 0.19
AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor, argini... 35 0.33
BC113556-1|AAI13557.1| 513|Homo sapiens t-SNARE domain containi... 31 5.4
BC034782-1|AAH34782.1| 442|Homo sapiens F-box protein 39 protein. 31 5.4
BC028132-1|AAH28132.1| 418|Homo sapiens F-box and leucine-rich ... 31 5.4
AK055726-1|BAB70997.1| 513|Homo sapiens protein ( Homo sapiens ... 31 5.4
CR533542-1|CAG38573.1| 359|Homo sapiens DKFZP434G072 protein. 30 7.1
BC074759-1|AAH74759.1| 359|Homo sapiens chromosome 4 open readi... 30 7.1
AK223345-1|BAD97065.1| 359|Homo sapiens chromosome 4 open readi... 30 7.1
AK093085-1|BAC04048.1| 186|Homo sapiens protein ( Homo sapiens ... 30 7.1
AY736035-1|AAU50679.1| 539|Homo sapiens F-box protein 31 protein. 30 9.4
AF428140-1|AAQ04213.1| 539|Homo sapiens F-box only protein 31 p... 30 9.4
>Z97653-1|CAJ55832.1| 479|Homo sapiens F-box and leucine-rich
repeat protein 16 protein.
Length = 479
Score = 56.8 bits (131), Expect = 7e-08
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = +2
Query: 368 DDRFLEKFFLFFNSVDRRTLAQVCTRWRDILYSSPRWWTGLIAVLDCGN-YVYLPGVACS 544
D++ L F +F++ ++ LAQVC WR +LY P++W GL VL Y LPG
Sbjct: 98 DEKILNGLFWYFSACEKCVLAQVCKAWRRVLY-QPKFWAGLTPVLHAKELYNVLPGGEKE 156
Query: 545 VSTIR**EEVFVVSF*YL-LRMMILTNSLDSSPCSAHHVHAIGLKRCTITDRGLE 706
++ F + + + + +D+ S V A+ LKR TITD GLE
Sbjct: 157 FVNLQGFAARGFEGFCLVGVSDLDICEFIDNYALSKKGVKAMSLKRSTITDAGLE 211
>BC036680-1|AAH36680.1| 479|Homo sapiens F-box and leucine-rich
repeat protein 16 protein.
Length = 479
Score = 56.8 bits (131), Expect = 7e-08
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = +2
Query: 368 DDRFLEKFFLFFNSVDRRTLAQVCTRWRDILYSSPRWWTGLIAVLDCGN-YVYLPGVACS 544
D++ L F +F++ ++ LAQVC WR +LY P++W GL VL Y LPG
Sbjct: 98 DEKILNGLFWYFSACEKCVLAQVCKAWRRVLY-QPKFWAGLTPVLHAKELYNVLPGGEKE 156
Query: 545 VSTIR**EEVFVVSF*YL-LRMMILTNSLDSSPCSAHHVHAIGLKRCTITDRGLE 706
++ F + + + + +D+ S V A+ LKR TITD GLE
Sbjct: 157 FVNLQGFAARGFEGFCLVGVSDLDICEFIDNYALSKKGVKAMSLKRSTITDAGLE 211
>AE006464-13|AAK61245.1| 581|Homo sapiens possible G-protein
receptor protein.
Length = 581
Score = 56.8 bits (131), Expect = 7e-08
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = +2
Query: 368 DDRFLEKFFLFFNSVDRRTLAQVCTRWRDILYSSPRWWTGLIAVLDCGN-YVYLPGVACS 544
D++ L F +F++ ++ LAQVC WR +LY P++W GL VL Y LPG
Sbjct: 130 DEKILNGLFWYFSACEKCVLAQVCKAWRRVLY-QPKFWAGLTPVLHAKELYNVLPGGEKE 188
Query: 545 VSTIR**EEVFVVSF*YL-LRMMILTNSLDSSPCSAHHVHAIGLKRCTITDRGLE 706
++ F + + + + +D+ S V A+ LKR TITD GLE
Sbjct: 189 FVNLQGFAARGFEGFCLVGVSDLDICEFIDNYALSKKGVKAMSLKRSTITDAGLE 243
>X75755-1|CAA53383.1| 221|Homo sapiens PR264/SC35 protein.
Length = 221
Score = 35.5 bits (78), Expect = 0.19
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 349 KKRSR*GSPAARNARGCGRSRS-TECIGHTLHKLGERLRPRNPSPVIRRESSAEARSTTP 173
+ R+R S + +R RS+S + + + + R R R+P PV +RES + +RS +P
Sbjct: 150 RSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSP 209
>X62447-1|CAA44307.1| 221|Homo sapiens PR 264 protein.
Length = 221
Score = 35.5 bits (78), Expect = 0.19
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 349 KKRSR*GSPAARNARGCGRSRS-TECIGHTLHKLGERLRPRNPSPVIRRESSAEARSTTP 173
+ R+R S + +R RS+S + + + + R R R+P PV +RES + +RS +P
Sbjct: 150 RSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSP 209
>M90104-1|AAA60306.1| 221|Homo sapiens splicing factor protein.
Length = 221
Score = 35.5 bits (78), Expect = 0.19
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 349 KKRSR*GSPAARNARGCGRSRS-TECIGHTLHKLGERLRPRNPSPVIRRESSAEARSTTP 173
+ R+R S + +R RS+S + + + + R R R+P PV +RES + +RS +P
Sbjct: 150 RSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSP 209
>BT007250-1|AAP35914.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 35.5 bits (78), Expect = 0.19
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 349 KKRSR*GSPAARNARGCGRSRS-TECIGHTLHKLGERLRPRNPSPVIRRESSAEARSTTP 173
+ R+R S + +R RS+S + + + + R R R+P PV +RES + +RS +P
Sbjct: 150 RSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSP 209
>BC070086-1|AAH70086.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 protein.
Length = 221
Score = 35.5 bits (78), Expect = 0.19
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 349 KKRSR*GSPAARNARGCGRSRS-TECIGHTLHKLGERLRPRNPSPVIRRESSAEARSTTP 173
+ R+R S + +R RS+S + + + + R R R+P PV +RES + +RS +P
Sbjct: 150 RSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSP 209
>BC001303-1|AAH01303.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 35.5 bits (78), Expect = 0.19
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 349 KKRSR*GSPAARNARGCGRSRS-TECIGHTLHKLGERLRPRNPSPVIRRESSAEARSTTP 173
+ R+R S + +R RS+S + + + + R R R+P PV +RES + +RS +P
Sbjct: 150 RSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSP 209
>BC000339-1|AAH00339.1| 221|Homo sapiens SFRS2 protein protein.
Length = 221
Score = 35.5 bits (78), Expect = 0.19
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 349 KKRSR*GSPAARNARGCGRSRS-TECIGHTLHKLGERLRPRNPSPVIRRESSAEARSTTP 173
+ R+R S + +R RS+S + + + + R R R+P PV +RES + +RS +P
Sbjct: 150 RSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSP 209
>AK092489-1|BAC03903.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ35170 fis, clone PLACE6012942, highly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 201
Score = 35.5 bits (78), Expect = 0.19
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 349 KKRSR*GSPAARNARGCGRSRS-TECIGHTLHKLGERLRPRNPSPVIRRESSAEARSTTP 173
+ R+R S + +R RS+S + + + + R R R+P PV +RES + +RS +P
Sbjct: 130 RSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSP 189
>AK223252-1|BAD96972.1| 221|Homo sapiens splicing factor,
arginine/serine-rich 2 variant protein.
Length = 221
Score = 34.7 bits (76), Expect = 0.33
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = -2
Query: 349 KKRSR*GSPAARNARGCGRSRS-TECIGHTLHKLGERLRPRNPSPVIRRESSAEARSTTP 173
+ R+R S + +R RS+S + + + + R R R+P PV +RES + RS +P
Sbjct: 150 RSRTRSRSRSTSKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRLRSKSP 209
>BC113556-1|AAI13557.1| 513|Homo sapiens t-SNARE domain containing
1 protein.
Length = 513
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 138 RVKVKMS-SVSAQGVVERASAELSRRITGLGLRGRKRSP 251
R+K ++S ++ GVV++ AE SR + + RG K+SP
Sbjct: 341 RLKTQLSDAIQCYGVVQKKIAEKSRALLPMAQRGSKQSP 379
>BC034782-1|AAH34782.1| 442|Homo sapiens F-box protein 39 protein.
Length = 442
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 365 LDDRFLEKFFLFFNSVDRRTLAQVCTRWRDILYSSPRW 478
L D L + F + DR A VC +W ++YS+ W
Sbjct: 19 LPDLCLCRVFWWLGDRDRSRAALVCRKWNQMMYSAELW 56
>BC028132-1|AAH28132.1| 418|Homo sapiens F-box and leucine-rich
repeat protein 14 protein.
Length = 418
Score = 30.7 bits (66), Expect = 5.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 380 LEKFFLFFNSVDRRTLAQVCTRWRDILYSSPRW 478
L F + + D+ AQVCT WRD Y W
Sbjct: 13 LAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVW 45
>AK055726-1|BAB70997.1| 513|Homo sapiens protein ( Homo sapiens
cDNA FLJ31164 fis, clone KIDNE1000104, weakly similar to
SYNTAXIN 7. ).
Length = 513
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 138 RVKVKMS-SVSAQGVVERASAELSRRITGLGLRGRKRSP 251
R+K ++S ++ GVV++ AE SR + + RG K+SP
Sbjct: 341 RLKTQLSDAIQCYGVVQKKIAEKSRALLPMAQRGSKQSP 379
>CR533542-1|CAG38573.1| 359|Homo sapiens DKFZP434G072 protein.
Length = 359
Score = 30.3 bits (65), Expect = 7.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -2
Query: 229 NPSPVIRRESSAEARSTTPCADT--DDILTLTRRIVSAGRPP-PDAPCSQPGHCAT 71
N + V R S +R C T ++ L + + + A RPP P CS PG C++
Sbjct: 102 NGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPPSPPKACSTPGSCSS 157
>BC074759-1|AAH74759.1| 359|Homo sapiens chromosome 4 open reading
frame 17 protein.
Length = 359
Score = 30.3 bits (65), Expect = 7.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -2
Query: 229 NPSPVIRRESSAEARSTTPCADT--DDILTLTRRIVSAGRPP-PDAPCSQPGHCAT 71
N + V R S +R C T ++ L + + + A RPP P CS PG C++
Sbjct: 102 NGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPPSPPKACSTPGSCSS 157
>AK223345-1|BAD97065.1| 359|Homo sapiens chromosome 4 open reading
frame 17 variant protein.
Length = 359
Score = 30.3 bits (65), Expect = 7.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -2
Query: 229 NPSPVIRRESSAEARSTTPCADT--DDILTLTRRIVSAGRPP-PDAPCSQPGHCAT 71
N + V R S +R C T ++ L + + + A RPP P CS PG C++
Sbjct: 102 NGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPPSPPKACSTPGSCSS 157
>AK093085-1|BAC04048.1| 186|Homo sapiens protein ( Homo sapiens
cDNA FLJ35766 fis, clone TESTI2004999. ).
Length = 186
Score = 30.3 bits (65), Expect = 7.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = -2
Query: 229 NPSPVIRRESSAEARSTTPCADT--DDILTLTRRIVSAGRPP-PDAPCSQPGHCAT 71
N + V R S +R C T ++ L + + + A RPP P CS PG C++
Sbjct: 102 NGAKVPPRPHSEPSRKIKECFKTSSENPLVIKKEEIKAKRPPSPPKACSTPGSCSS 157
>AY736035-1|AAU50679.1| 539|Homo sapiens F-box protein 31 protein.
Length = 539
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 365 LDDRFLEKFFLFFNSVDRRTLAQVCTRWRDILYSSPRW 478
L L + F D +LAQVCT++R IL++ W
Sbjct: 70 LPPELLVEIFASLPGTDLPSLAQVCTKFRRILHTDTIW 107
>AF428140-1|AAQ04213.1| 539|Homo sapiens F-box only protein 31
protein.
Length = 539
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 365 LDDRFLEKFFLFFNSVDRRTLAQVCTRWRDILYSSPRW 478
L L + F D +LAQVCT++R IL++ W
Sbjct: 70 LPPELLVEIFASLPGTDLPSLAQVCTKFRRILHTDTIW 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,979,696
Number of Sequences: 237096
Number of extensions: 2220157
Number of successful extensions: 6602
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 6109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6601
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -