Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021212
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   7.0  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.2  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   9.2  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 167 SPSCRSDGIPTPECSSANPRLENSSI 244
           SPS     +PT   S++NP   + S+
Sbjct: 76  SPSSTPSSLPTQRTSTSNPTYSSRSV 101


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 261 RPSFTVKYMHSNAN 302
           +P FT KY H N N
Sbjct: 57  QPGFTGKYCHENIN 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -2

Query: 323  EACKVFHICIRVHVL 279
            E+C  F++C+  H++
Sbjct: 1216 ESCSSFYVCVNGHLV 1230


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 505 CKGIPDFWYNIFRNVSMLSE 564
           C+G   F+   + N+S +SE
Sbjct: 22  CEGCKSFFGRTYNNISSISE 41


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 624 ALHFNILQAF 595
           A HFNILQ F
Sbjct: 133 AFHFNILQEF 142


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 624 ALHFNILQAF 595
           A HFNILQ F
Sbjct: 133 AFHFNILQEF 142


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,870
Number of Sequences: 336
Number of extensions: 3071
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)