Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021211
(780 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_214| Best HMM Match : Arf (HMM E-Value=0) 175 4e-44
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 75 9e-14
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 9e-11
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 64 9e-11
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 61 1e-09
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 61 1e-09
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 59 5e-09
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 58 1e-08
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 58 1e-08
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 56 4e-08
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 52 4e-07
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 42 4e-04
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 33 0.20
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 32 0.60
SB_14105| Best HMM Match : G-alpha (HMM E-Value=0) 32 0.60
SB_52473| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0026) 31 1.0
SB_6421| Best HMM Match : DUF590 (HMM E-Value=2.5e-13) 31 1.0
SB_30255| Best HMM Match : Keratin_B2 (HMM E-Value=3.8) 31 1.4
SB_38601| Best HMM Match : MMR_HSR1 (HMM E-Value=0.055) 31 1.4
SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1) 30 2.4
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014) 30 2.4
SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17) 30 2.4
SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05) 30 2.4
SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14) 30 2.4
SB_1237| Best HMM Match : rve (HMM E-Value=0.00029) 30 2.4
SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056) 30 2.4
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 30 2.4
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08) 30 2.4
SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07) 30 2.4
SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12) 30 2.4
SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097) 30 2.4
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 30 2.4
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14) 30 2.4
SB_25759| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15) 29 3.2
SB_36756| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 29 4.2
SB_35858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_16307| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_35763| Best HMM Match : DUF651 (HMM E-Value=0.26) 28 7.4
SB_39796| Best HMM Match : VWA (HMM E-Value=0) 28 7.4
SB_26113| Best HMM Match : CcmD (HMM E-Value=6.7) 28 7.4
SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 28 9.8
SB_54562| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06) 28 9.8
SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07) 28 9.8
SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05) 28 9.8
SB_36517| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06) 28 9.8
SB_35108| Best HMM Match : AT_hook (HMM E-Value=0.15) 28 9.8
SB_22667| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 28 9.8
SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11) 28 9.8
SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_4623| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 28 9.8
SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14) 28 9.8
SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_35469| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
SB_34709| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07) 28 9.8
SB_34271| Best HMM Match : RVT_1 (HMM E-Value=3.4e-07) 28 9.8
SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05) 28 9.8
SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13) 28 9.8
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 175 bits (425), Expect = 4e-44
Identities = 84/149 (56%), Positives = 103/149 (69%), Gaps = 1/149 (0%)
Frame = +2
Query: 266 LAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLP 445
+AQHVPTLHPTSEELS+G MRFTTFDLGGH+QARR+W+DYFPAV+ IVF++D D RL
Sbjct: 1 MAQHVPTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLA 60
Query: 446 ESKAELDSLLTDETLSNCPVLFSATRLINPVLPVKTNYVTFSI-CISRPLEREKYQGPSY 622
ESK ELDSLL DE LS+CPVL ++ P V +Y+ + + +
Sbjct: 61 ESKKELDSLLADEQLSSCPVLILGNKIDIPG-AVGEDYIRQNFGLFGQTTGKGSVAAKDL 119
Query: 623 PVGRWSFFMCSVLKRQGYGEGFRWLAQYI 709
FMCSVLKR+GYGEGFRWL++YI
Sbjct: 120 ATRPMELFMCSVLKREGYGEGFRWLSEYI 148
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 74.5 bits (175), Expect = 9e-14
Identities = 49/156 (31%), Positives = 73/156 (46%)
Frame = +2
Query: 242 LTHVEDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVD 421
L H++ D +PT+ E + +++FT +D+GG + R +WR YF ++F+VD
Sbjct: 107 LYHLKLDEPVNTIPTIGFNVEVVEYKNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVD 166
Query: 422 ACDRPRLPESKAELDSLLTDETLSNCPVLFSATRLINPVLPVKTNYVTFSICISRPLERE 601
+ DR R+ E+K EL LL +E L +L A + LP + S +S R
Sbjct: 167 SNDRDRIQEAKEELFKLLKEEELKRAALLVLANK---QDLPDSMSTTELSEKLSLHTLRS 223
Query: 602 KYQGPSYPVGRWSFFMCSVLKRQGYGEGFRWLAQYI 709
+ W LK QG EG WLAQ I
Sbjct: 224 R---------NWYIQATCALKGQGVYEGLEWLAQQI 250
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +3
Query: 180 LWKKSGKLLFLGLDNAGKTTLLHMLKMIDLLN 275
L K +LL +GLD AGKTT+L+ LK+ + +N
Sbjct: 86 LGKDELRLLMVGLDAAGKTTILYHLKLDEPVN 117
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 64.5 bits (150), Expect = 9e-11
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +2
Query: 278 VPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKA 457
+PT+ E + ++ FT +D+GG + R +WR YF ++++VD+ DR R+ ESK
Sbjct: 46 IPTIGFNVESVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKE 105
Query: 458 ELDSLLTDETLSNCPVLFSATR 523
EL+ +L ++ L + VL A +
Sbjct: 106 ELNKMLQEDELKDAVVLVMANK 127
Score = 33.9 bits (74), Expect = 0.15
Identities = 14/29 (48%), Positives = 23/29 (79%)
Frame = +3
Query: 186 KKSGKLLFLGLDNAGKTTLLHMLKMIDLL 272
KK ++L +GLD AGKTT+L+ LK+ +++
Sbjct: 15 KKQMRILMVGLDAAGKTTILYKLKLGEIV 43
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 64.5 bits (150), Expect = 9e-11
Identities = 44/150 (29%), Positives = 70/150 (46%)
Frame = +2
Query: 260 DRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPR 439
+ + VPTL E ++ ++ FT +D+GG + R +WR Y+ I+F+VD+ DR R
Sbjct: 19 EEVVSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVDSADRER 78
Query: 440 LPESKAELDSLLTDETLSNCPVLFSATRLINPVLPVKTNYVTFSICISRPLEREKYQGPS 619
E++ EL LL +E L +L A + N +T S I L+ + +G
Sbjct: 79 AEEARNELHKLLAEEELQQVILLVIANK------QDMANAMTASE-IREKLKLNEIRGRP 131
Query: 620 YPVGRWSFFMCSVLKRQGYGEGFRWLAQYI 709
W +K +G EG W+A I
Sbjct: 132 -----WFVQSACAVKGEGLFEGLDWMATQI 156
Score = 31.9 bits (69), Expect = 0.60
Identities = 12/22 (54%), Positives = 20/22 (90%)
Frame = +3
Query: 210 LGLDNAGKTTLLHMLKMIDLLN 275
+GLDNAGKTT+L+ LK+ ++++
Sbjct: 2 IGLDNAGKTTILYRLKLEEVVS 23
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 60.9 bits (141), Expect = 1e-09
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +2
Query: 278 VPTLHPTSEELS-IGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESK 454
VPT+ E +S ++ F+ +D+GG + RR+WR YF + I+F+VD+ D+ R+ E +
Sbjct: 138 VPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVR 197
Query: 455 AELDSLLTDETLSNCPVLFSATR 523
EL +L L+ PV+ A +
Sbjct: 198 EELTRVLQHSELNGVPVVVVANK 220
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/82 (31%), Positives = 49/82 (59%)
Frame = +2
Query: 278 VPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKA 457
+PT+ E + ++ FT +D+GG + R +WR YF ++F+VD+ DR R+ E++
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEARE 105
Query: 458 ELDSLLTDETLSNCPVLFSATR 523
EL+ +L ++ L + +L A +
Sbjct: 106 ELNRMLNEDELRDAVLLVFANK 127
Score = 35.9 bits (79), Expect = 0.037
Identities = 17/35 (48%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = +3
Query: 171 FLGLW-KKSGKLLFLGLDNAGKTTLLHMLKMIDLL 272
F GL+ KK ++L +GLD AGKTT+L+ LK+ +++
Sbjct: 9 FAGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIV 43
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 58.8 bits (136), Expect = 5e-09
Identities = 29/88 (32%), Positives = 50/88 (56%)
Frame = +2
Query: 302 EELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTD 481
E + ++ FT +D+GG + R +WR YF ++F+VD+ DR R E+K EL +L +
Sbjct: 503 ETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRMLAE 562
Query: 482 ETLSNCPVLFSATRLINPVLPVKTNYVT 565
+ L + +L A + + V+T YV+
Sbjct: 563 DELRDAVLLVFANK---QLFCVETRYVS 587
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/77 (35%), Positives = 44/77 (57%)
Frame = +2
Query: 278 VPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKA 457
+PT+ ++S G++ +D+GG + R +W Y V+ IV++VDA D +L SK
Sbjct: 50 IPTVGFNMRKVSKGNVTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKN 109
Query: 458 ELDSLLTDETLSNCPVL 508
EL +LL L+ P+L
Sbjct: 110 ELHNLLEKPQLAGIPIL 126
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 141 ILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHML 254
ILDWF + WK+ +L +GL +GKTT ++++
Sbjct: 8 ILDWFKSLF-----WKEEMELTLVGLQYSGKTTFVNVI 40
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/83 (33%), Positives = 47/83 (56%)
Frame = +2
Query: 275 HVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESK 454
+V TL PT ++ T +D+GG + R +WR YF + ++F+VD+ D R+PE+K
Sbjct: 54 NVETLQPTK------NVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAK 107
Query: 455 AELDSLLTDETLSNCPVLFSATR 523
EL +L + + PV+ A +
Sbjct: 108 EELHGVLDSDEFRDVPVVVVANK 130
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +3
Query: 198 KLLFLGLDNAGKTTLLHMLKM 260
+++ LGLD AGKTT+L+ LK+
Sbjct: 21 RIVMLGLDAAGKTTILYKLKL 41
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/67 (34%), Positives = 41/67 (61%)
Frame = +2
Query: 323 MRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCP 502
+RF +D+GG +Q R +W+ Y DA++++VD+ +L E++ EL +LL L+ P
Sbjct: 66 IRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAP 125
Query: 503 VLFSATR 523
+L A +
Sbjct: 126 ILIFANK 132
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 52.4 bits (120), Expect = 4e-07
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +2
Query: 341 DLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLFSAT 520
D+GG + R +WR YF ++F+VD DR R+ E++ EL ++ D + + +L A
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202
Query: 521 R 523
+
Sbjct: 203 K 203
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 52.4 bits (120), Expect = 4e-07
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +2
Query: 326 RFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDE 484
+ +D+GG + R WR+YF + D ++++VD+ D+ RL + K EL LL +E
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQGLLVEE 55
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +2
Query: 308 LSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDET 487
L+ + +++GG ++ R W ++ +V++VD+ D R ES+ L SLL++
Sbjct: 208 LTTDGLNLNIWEIGGDEKYRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSL 267
Query: 488 LSNCPVLFSATR 523
L+ PVL A++
Sbjct: 268 LNGVPVLLVASK 279
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/115 (24%), Positives = 54/115 (46%)
Frame = +2
Query: 350 GHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLFSATRLI 529
G R WR Y+ DA++++VD+ D+ R+ SK EL ++L ++ L ++ A +
Sbjct: 155 GQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANKQ- 213
Query: 530 NPVLPVKTNYVTFSICISRPLEREKYQGPSYPVGRWSFFMCSVLKRQGYGEGFRW 694
+ + ++ V+ ++ +S R W+ F S +K +G E W
Sbjct: 214 DMEGAMSSSEVSNALGLSALKSR-----------TWAIFKTSAVKGEGLDEAMEW 257
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 35.9 bits (79), Expect = 0.037
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV 418
E D L V T + + F FD+GG + R+ W F V AI+F V
Sbjct: 171 EQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFCV 225
>SB_19713| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 507
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +2
Query: 224 CREDNTLTHVEDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDA 403
CR D T + D L T E I S+ F D+GG + R W F V +
Sbjct: 375 CRADYIPT--KQDMLHSRKATKGIVEHEFMIKSIPFKMVDVGGQRSQRAKWFQCFDEVTS 432
Query: 404 IVFLVDA 424
I+FLV +
Sbjct: 433 ILFLVSS 439
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 5/32 (15%)
Frame = +3
Query: 177 GLWKKSGK-----LLFLGLDNAGKTTLLHMLK 257
GLWK + +L LGLDNAGKTTLL +K
Sbjct: 11 GLWKYLFQKDEYFILILGLDNAGKTTLLEQIK 42
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV 418
E D L V T + + F FD+GG + R+ W F V AI++ V
Sbjct: 220 EQDLLRTRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCV 274
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV 418
E D L V T + + F FD+GG + R+ W F V AI++ V
Sbjct: 172 EQDLLRTRVKTTGIVEVQFDYKRLHFKLFDVGGQRSERKKWIHCFEDVTAIIYCV 226
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 33.1 bits (72), Expect = 0.26
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDR 433
E D L PT + ++ F D+GG + RR W F V +I+FLV +
Sbjct: 170 EQDVLRARAPTSGIIEYPFDLETIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEY 229
Query: 434 PR-LPESKAE 460
+ L ES +E
Sbjct: 230 DQVLVESDSE 239
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 198 KLLFLGLDNAGKTTLLHMLKMIDLLNM 278
++L LGLDN+GKTT+L L D+L++
Sbjct: 19 RILLLGLDNSGKTTILKSLASEDVLHI 45
Score = 33.1 bits (72), Expect = 0.26
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 311 SIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETL 490
S G R +D+GG ++ R W++YF D + ELD LL +E L
Sbjct: 58 SKGGFRLNVWDIGGQRKIRPYWKNYFENTDIL-----------------ELDELLEEEKL 100
Query: 491 SNCPVLFSATR--LINPVLPVK 550
P+L A + L+N P +
Sbjct: 101 IGVPLLVFANKQDLMNAATPAE 122
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 31.9 bits (69), Expect = 0.60
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 320 SMRFTTFDLGGHQQARRVWRDYF 388
S++FT +D+GG Q+ R +WR Y+
Sbjct: 232 SLKFTIWDVGGLQKLRPLWRHYY 254
>SB_14105| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 320
Score = 31.9 bits (69), Expect = 0.60
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 341 DLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPE----SKAELDSLLTDETLSNCPVL 508
D+GG + R+ W +F V A+VF E + A LDSL E +++C L
Sbjct: 168 DVGGQKNQRKKWIHFFDGVTAVVFFASLSSYDEQLEEEEDTNAMLDSLDLFEEITHCEFL 227
>SB_52473| Best HMM Match : MMR_HSR1 (HMM E-Value=0.0026)
Length = 936
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 183 WKKSGKLLFLGLDNAGKTTLLHMLKMIDLLNMY 281
W G + LG N+GKTTL + +DLLN++
Sbjct: 281 WDHDGDIYMLGCSNSGKTTLFN--TFMDLLNVH 311
>SB_6421| Best HMM Match : DUF590 (HMM E-Value=2.5e-13)
Length = 422
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/74 (25%), Positives = 29/74 (39%)
Frame = +1
Query: 502 CAVLGNKIDKPGAASEDELRHFFNLYQQTTGKGKVSRSELPGRPLELFHVLGAEASGLRR 681
C NK+++ G + E+ F Q G + SE + + +FH G
Sbjct: 162 CCCRSNKVEEAGEVNS-EIEDFLTYEMQKEPLGDFTLSEYTEKGMTIFHYKGTRKKLFAA 220
Query: 682 GLPLARAVHRLSAL 723
PLA + LS L
Sbjct: 221 AFPLAPLIALLSNL 234
>SB_30255| Best HMM Match : Keratin_B2 (HMM E-Value=3.8)
Length = 304
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERLVSEQRV*FSLGLRQTW 434
+ LHWQ RVY+ R++ V ER+ + V + + TW
Sbjct: 154 IPLHWQKRVYEDLLRDEALGVVERVPYGEPVTWCHRMVVTW 194
>SB_38601| Best HMM Match : MMR_HSR1 (HMM E-Value=0.055)
Length = 882
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3
Query: 198 KLLFLGLDNAGKTTLLHMLK 257
KL+F+G+ N GKTTLL+ L+
Sbjct: 2 KLMFVGVSNIGKTTLLNQLR 21
>SB_57168| Best HMM Match : DUF845 (HMM E-Value=4.1)
Length = 132
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 395 VDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLFSATRLINPVLPVKTNYVTFSI 574
V +VF+VDA +R R+ E ++ L + +S P+L + T I ++ + T + I
Sbjct: 36 VFGVVFVVDASNRERMDECRSILHETKQNPRVSGKPLLITITIKI-IIIIITTTIIIIII 94
Query: 575 CIS 583
IS
Sbjct: 95 TIS 97
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 579 IPLHWQKRVYEDLLRDEALGVVERV 603
>SB_45859| Best HMM Match : RVT_1 (HMM E-Value=0.0014)
Length = 471
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 272 IPLHWQKRVYEDLLRDEALGVVERV 296
>SB_27367| Best HMM Match : rve (HMM E-Value=9.5e-17)
Length = 1590
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 620 IPLHWQKRVYEDLLRDEALGVVERV 644
>SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 176 IPLHWQKRVYEDLLRDEALGVVERV 200
>SB_17286| Best HMM Match : RVT_1 (HMM E-Value=1.5e-05)
Length = 288
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 25 IPLHWQKRVYEDLLRDEALGVVERV 49
>SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 593 IPLHWQKRVYEDLLRDEALGVVERV 617
>SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14)
Length = 1447
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 588 IPLHWQKRVYEDLLRDEALGVVERV 612
>SB_1237| Best HMM Match : rve (HMM E-Value=0.00029)
Length = 1026
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 325 IPLHWQKRVYEDLLRDEALGVVERV 349
>SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056)
Length = 437
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 131 IPLHWQKRVYEDLLRDEALGVVERV 155
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 332 TTFDLGGHQQARRVWRDYFPAV 397
T +DLGG + R +W+DY+ V
Sbjct: 7 TVYDLGGGAKIRGIWKDYYAEV 28
>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
Length = 1201
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 622 IPLHWQKRVYEDLLRDEALGVVERV 646
>SB_31861| Best HMM Match : rve (HMM E-Value=3.6e-07)
Length = 1253
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 608 IPLHWQKRVYEDLLRDEALGVVERV 632
>SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12)
Length = 1067
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 546 IPLHWQKRVYEDLLRDEALGVVERV 570
>SB_27735| Best HMM Match : Retrotrans_gag (HMM E-Value=0.097)
Length = 812
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 680 IPLHWQKRVYEDLLRDEALGVVERV 704
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 177 IPLHWQKRVYEDLLRDEALGVVERV 201
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 603 IPLHWQKRVYEDLLRDEALGVVERV 627
>SB_7198| Best HMM Match : rve (HMM E-Value=3.5e-14)
Length = 865
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ RVY+ R++ V ER+
Sbjct: 69 IPLHWQKRVYEDLLRDEALGVVERV 93
>SB_25759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Frame = +2
Query: 449 SKAELDSLLTDETLSNCPVLFSATRLINPVLPVKTNYVTFSICISRPLEREKY----QGP 616
++AE+D L + + C +LF INP + V F + + L ++Y G
Sbjct: 46 AEAEIDVLTGERLIKRCDILFDCGESINPDVDVGQVEGAFMMGVGLWLHEKQYFDHHTGQ 105
Query: 617 SYPVGRWSF 643
G W++
Sbjct: 106 ELSTGTWTY 114
>SB_20587| Best HMM Match : rve (HMM E-Value=7.2e-15)
Length = 1485
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERLVSEQRV*FSLGLRQTW 434
+ LHWQ +VY R++ V ER+ + V + +R+T+
Sbjct: 726 IPLHWQQKVYDDLLRDEALGVIERVPYGEPVTWCHRMRETF 766
>SB_36756| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 638
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 428 DRPRLPESKAELDSLLT 478
+ PRLPE+KA LD+LLT
Sbjct: 294 EMPRLPEAKATLDTLLT 310
>SB_35858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 708
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 329 FTTFDLGG-HQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLT 478
FTTFDLGG ++ +WR + AI+ L + + E +LD L+T
Sbjct: 418 FTTFDLGGCMKELPLIWRSFSTESKAILPLCFL--KSQFLEEPVDLDELMT 466
>SB_16307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +2
Query: 362 ARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLFSATRLINPVL 541
++R W + + +V +V R P++ A ++ CP L + T +N +L
Sbjct: 10 SKRAWAIFLACLFGLVIIVALMVLERQPKNNATFPFMVPA-----CPYLPALTVFVNVLL 64
Query: 542 PVKTNYVTF 568
VK +Y+T+
Sbjct: 65 IVKLDYMTY 73
>SB_35763| Best HMM Match : DUF651 (HMM E-Value=0.26)
Length = 436
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 461 VQPWTPADVAGHTRRPGTLWRPPRGSSRATHD 366
+ P A ++ H RR LW+PPRG D
Sbjct: 83 LHPSLSASLSHHQRRLYGLWKPPRGKKNILTD 114
>SB_39796| Best HMM Match : VWA (HMM E-Value=0)
Length = 2119
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +2
Query: 494 NCPVLFSATRLINPVLPVKTNYVTFSICISRPLEREKYQGPSYPVGRWSFFMCSVLKR 667
+CPV F+ N + + T + R E Y G + G+W+ +M V+ R
Sbjct: 1360 SCPVKFTKVGCFNDDMKAPRPFPTM-LFTDRDTESVLYSGTKFNAGQWNTYMPDVVCR 1416
>SB_26113| Best HMM Match : CcmD (HMM E-Value=6.7)
Length = 198
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -2
Query: 437 VAGHTRRPGTLWRPPRGSSRATHDAPADAHRGRTS*NAY 321
V GH G +WR G +APA RGR AY
Sbjct: 152 VDGHAGTMGGMWRSRGGRQEIAKNAPACFGRGRKVRKAY 190
>SB_59443| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 942
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 49 IPLHWQQKVYDDLLRDEALGVIERV 73
>SB_54562| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06)
Length = 909
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 357 IPLHWQQKVYDDLLRDEALGVIERV 381
>SB_49727| Best HMM Match : RVT_1 (HMM E-Value=4.5e-07)
Length = 1286
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 588 IPLHWQQKVYDDLLRDEALGVIERV 612
>SB_48733| Best HMM Match : RVT_1 (HMM E-Value=5.2e-05)
Length = 1104
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 583 IPLHWQQKVYDDLLRDEALGVIERV 607
>SB_36517| Best HMM Match : RVT_1 (HMM E-Value=1.4e-06)
Length = 817
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 401 IPLHWQQKVYDDLLRDEALGVIERV 425
>SB_35108| Best HMM Match : AT_hook (HMM E-Value=0.15)
Length = 1600
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 536 IPLHWQQKVYDDLLRDEALGVIERV 560
>SB_22667| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 795
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 438 IPLHWQQKVYDDLLRDEALGVIERV 462
>SB_17624| Best HMM Match : rve (HMM E-Value=2.2e-11)
Length = 1213
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 221 IPLHWQQKVYDDLLRDEALGVIERV 245
>SB_7962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1269
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 443 IPLHWQQKVYDDLLRDEALGVIERV 467
>SB_4623| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 452
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 151 IPLHWQQKVYDDLLRDEALGVIERV 175
>SB_59576| Best HMM Match : rve (HMM E-Value=3.7e-14)
Length = 707
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 71 IPLHWQQKVYDDLLRDEALGVIERV 95
>SB_55917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1412
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 531 IPLHWQQKVYDDLLRDEALGVIERV 555
>SB_53291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 49 IPLHWQQKVYDDLLRDEALGVIERV 73
>SB_35469| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 906
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 605 IPLHWQQKVYDDLLRDEALGVIERV 629
>SB_34709| Best HMM Match : RVT_1 (HMM E-Value=3.8e-07)
Length = 436
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 203 IPLHWQQKVYDDLLRDEALGVIERV 227
>SB_34271| Best HMM Match : RVT_1 (HMM E-Value=3.4e-07)
Length = 303
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 49 IPLHWQQKVYDDLLRDEALGVIERV 73
>SB_33158| Best HMM Match : rve (HMM E-Value=7.5e-05)
Length = 848
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 451 IPLHWQQKVYDDLLRDEALGVIERV 475
>SB_30683| Best HMM Match : rve (HMM E-Value=1.9e-13)
Length = 776
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 556 VRLHWQHRVYQSCCREQHRAVTERL 482
+ LHWQ +VY R++ V ER+
Sbjct: 423 IPLHWQQKVYDDLLRDEALGVIERV 447
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,758,443
Number of Sequences: 59808
Number of extensions: 467965
Number of successful extensions: 1587
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1575
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2131907602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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