Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021211
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical pr... 169 3e-42
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 66 4e-11
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 64 1e-10
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 63 2e-10
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 62 6e-10
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 62 6e-10
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 59 3e-09
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 56 3e-08
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 52 5e-07
Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical pr... 48 6e-06
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 46 4e-05
Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical pr... 41 9e-04
AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeri... 41 9e-04
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 40 0.002
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 40 0.002
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 38 0.008
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 38 0.008
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 37 0.019
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 37 0.019
AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying de... 37 0.019
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 37 0.019
U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alph... 36 0.025
AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeri... 36 0.025
AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeri... 36 0.025
AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein, su... 36 0.025
AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alp... 36 0.025
AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s... 36 0.025
Z78060-4|CAB01489.1| 356|Caenorhabditis elegans Hypothetical pr... 36 0.032
AY146566-1|AAN78238.1| 350|Caenorhabditis elegans ODR-3 protein. 36 0.032
AY146565-1|AAN78237.1| 346|Caenorhabditis elegans ODR-3 protein. 36 0.032
AY146564-1|AAN78236.1| 344|Caenorhabditis elegans ODR-3 protein. 36 0.032
AY146563-1|AAN78235.1| 345|Caenorhabditis elegans ODR-3 protein. 36 0.032
AY146562-1|AAN78234.1| 342|Caenorhabditis elegans ODR-3 protein. 36 0.032
AY146561-1|AAN78233.1| 346|Caenorhabditis elegans ODR-3 protein. 36 0.032
AY146560-1|AAN78232.1| 346|Caenorhabditis elegans ODR-3 protein. 36 0.032
AY146559-1|AAN78231.1| 345|Caenorhabditis elegans ODR-3 protein. 36 0.032
AY146558-1|AAN78230.1| 344|Caenorhabditis elegans ODR-3 protein. 36 0.032
AY008142-1|AAG32095.1| 356|Caenorhabditis elegans heterotrimeri... 36 0.032
Z75537-6|CAA99838.2| 348|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z75527-9|CAA99780.2| 348|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical pr... 35 0.057
AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeri... 35 0.057
AY008135-1|AAG32088.1| 348|Caenorhabditis elegans heterotrimeri... 35 0.057
Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical pr... 35 0.075
AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeri... 35 0.075
U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alph... 34 0.099
AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeri... 34 0.099
Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical pr... 34 0.13
M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha... 34 0.13
M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha... 34 0.13
AY008138-1|AAG32091.1| 357|Caenorhabditis elegans heterotrimeri... 34 0.13
AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeri... 34 0.13
AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeri... 34 0.13
AC024877-8|AAF60904.1| 357|Caenorhabditis elegans G protein, al... 34 0.13
X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2 p... 33 0.23
U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alph... 33 0.23
AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeri... 33 0.23
AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeri... 33 0.23
AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein, a... 33 0.23
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 33 0.30
M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alp... 32 0.40
AF039041-7|ABM01867.1| 335|Caenorhabditis elegans G protein, al... 32 0.40
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 31 0.92
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p... 30 1.6
U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical pr... 30 2.1
U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical p... 30 2.1
AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeri... 30 2.1
AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, al... 30 2.1
AJ320257-1|CAC44622.1| 877|Caenorhabditis elegans putative telo... 29 2.8
AF400665-1|AAL28024.1| 877|Caenorhabditis elegans CLK-2 protein. 29 2.8
AC006605-5|AAK85444.3| 877|Caenorhabditis elegans Clock (biolog... 29 2.8
Z81065-1|CAB02968.1| 399|Caenorhabditis elegans Hypothetical pr... 29 4.9
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 29 4.9
U40953-5|AAB52648.1| 385|Caenorhabditis elegans G protein, alph... 28 8.6
U39855-2|AAA81081.2| 355|Caenorhabditis elegans G protein, alph... 28 8.6
AY008134-1|AAG32087.1| 355|Caenorhabditis elegans heterotrimeri... 28 8.6
AY008128-1|AAG32081.1| 385|Caenorhabditis elegans heterotrimeri... 28 8.6
>U58748-6|AAB52968.1| 193|Caenorhabditis elegans Hypothetical
protein ZK180.4 protein.
Length = 193
Score = 169 bits (410), Expect = 3e-42
Identities = 81/159 (50%), Positives = 109/159 (68%), Gaps = 2/159 (1%)
Frame = +2
Query: 239 TLTHV-EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
TL H+ +DDR+AQHVPTLHPTSE++S+G + FTT+DLGGH QARRVW+DYFPAVDA+VFL
Sbjct: 36 TLLHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFL 95
Query: 416 VDACDRPRLPESKAELDSLLTDETLSNCPVLFSATRLINPVLPVKTNYVTFSICISRPLE 595
+D D R+ ES+ EL+SLL DE +++ PVL ++ P + + + + + I
Sbjct: 96 IDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPG-ALSEDQLKWQLNIQHMCT 154
Query: 596 REKYQGPSYPVGR-WSFFMCSVLKRQGYGEGFRWLAQYI 709
+ + R FMCSVL+RQGYGEG RWL QY+
Sbjct: 155 GKGDVSRNEMASRPMEVFMCSVLQRQGYGEGIRWLGQYL 193
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/40 (77%), Positives = 33/40 (82%)
Frame = +3
Query: 138 FILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLK 257
F+ DWF GVL LGL K GKL+FLGLDNAGKTTLLHMLK
Sbjct: 3 FLWDWFNGVLNMLGLANKKGKLVFLGLDNAGKTTLLHMLK 42
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 65.7 bits (153), Expect = 4e-11
Identities = 43/176 (24%), Positives = 77/176 (43%)
Frame = +2
Query: 173 SWSMEKVRQALVSGT*QCREDNTLTHVEDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGG 352
SW + K + +V G + L + + PT+ EE+S ++ F +D+GG
Sbjct: 11 SWWIGKKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDIGG 70
Query: 353 HQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLFSATRLIN 532
+ R+ W Y+ D ++ ++D+ D R+P K +L ++L E L+ +L A +
Sbjct: 71 QESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANK--- 127
Query: 533 PVLPVKTNYVTFSICISRPLEREKYQGPSYPVGRWSFFMCSVLKRQGYGEGFRWLA 700
LP N +S L + +G +W C +K +G E W+A
Sbjct: 128 QDLPGAMNPAE----VSTQLGLQTLRG----ARKWQINGCCAVKGEGLPEALEWIA 175
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/82 (35%), Positives = 50/82 (60%)
Frame = +2
Query: 278 VPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKA 457
+PT+ E ++ + T +D+GG ++ R +W+ YFP +VF+VD+ D R+PE+K
Sbjct: 46 IPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKE 105
Query: 458 ELDSLLTDETLSNCPVLFSATR 523
EL SLL + L++ +L A +
Sbjct: 106 ELFSLLAEPELADSHLLVFANK 127
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +3
Query: 198 KLLFLGLDNAGKTTLLHMLKMIDLLN 275
+ L LGLD AGKTT+L+ LK+ + +N
Sbjct: 19 RTLMLGLDGAGKTTILYKLKLNETVN 44
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/114 (26%), Positives = 62/114 (54%)
Frame = +2
Query: 278 VPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKA 457
+PT+ E ++ +++F +D+GG + R +WR Y+ A++F++DA DR R+ E++
Sbjct: 42 IPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYYTGTQALIFVMDAADRDRVDEARM 101
Query: 458 ELDSLLTDETLSNCPVLFSATRLINPVLPVKTNYVTFSICISRPLEREKYQGPS 619
EL ++ D + +L A + + +K + + + ++R +R Y PS
Sbjct: 102 ELHRIINDREMKEAIILVFANKQ-DLADAMKPHEIQDKLGLTRIRDRNWYVQPS 154
Score = 34.3 bits (75), Expect = 0.099
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 186 KKSGKLLFLGLDNAGKTTLLHMLKM 260
KK ++L LGLD AGKTT+L+ LK+
Sbjct: 11 KKELRILMLGLDAAGKTTILYKLKL 35
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/82 (31%), Positives = 48/82 (58%)
Frame = +2
Query: 278 VPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKA 457
+PT+ E + ++ FT +D+GG + R +WR YF ++F+VD+ D+ R+ ES+
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESRE 105
Query: 458 ELDSLLTDETLSNCPVLFSATR 523
EL +L ++ L + +L A +
Sbjct: 106 ELHKMLNEDELRDATLLVFANK 127
Score = 32.7 bits (71), Expect = 0.30
Identities = 13/29 (44%), Positives = 23/29 (79%)
Frame = +3
Query: 186 KKSGKLLFLGLDNAGKTTLLHMLKMIDLL 272
K+ ++L +GLD AGKTT+L+ LK+ +++
Sbjct: 15 KRQVRILMVGLDAAGKTTILYKLKLGEIV 43
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 61.7 bits (143), Expect = 6e-10
Identities = 26/82 (31%), Positives = 48/82 (58%)
Frame = +2
Query: 278 VPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKA 457
+PT+ E + ++ FT +D+GG + R +WR YF ++F+VD+ D+ R+ ES+
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDKERIEESRE 105
Query: 458 ELDSLLTDETLSNCPVLFSATR 523
EL +L ++ L + +L A +
Sbjct: 106 ELHKMLNEDELRDATLLVFANK 127
Score = 32.7 bits (71), Expect = 0.30
Identities = 13/29 (44%), Positives = 23/29 (79%)
Frame = +3
Query: 186 KKSGKLLFLGLDNAGKTTLLHMLKMIDLL 272
K+ ++L +GLD AGKTT+L+ LK+ +++
Sbjct: 15 KRQVRILMVGLDAAGKTTILYKLKLGEIV 43
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/82 (31%), Positives = 48/82 (58%)
Frame = +2
Query: 278 VPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKA 457
+PT+ E + ++ FT +D+GG + R +WR YF ++F+VD+ DR R+ E++
Sbjct: 46 IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEARE 105
Query: 458 ELDSLLTDETLSNCPVLFSATR 523
EL +L ++ L + +L A +
Sbjct: 106 ELMRMLAEDELRDAVLLVFANK 127
Score = 34.3 bits (75), Expect = 0.099
Identities = 16/35 (45%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = +3
Query: 171 FLGLW-KKSGKLLFLGLDNAGKTTLLHMLKMIDLL 272
F GL+ K+ ++L +GLD AGKTT+L+ LK+ +++
Sbjct: 9 FKGLFGKREMRILMVGLDAAGKTTILYKLKLGEIV 43
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/82 (31%), Positives = 47/82 (57%)
Frame = +2
Query: 278 VPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKA 457
+PT+ E++ +++F +DLGG R WR Y+ DAI+++VD+ DR R+ S+
Sbjct: 45 IPTIGFNVEQVEYKNLKFQVWDLGGQTSIRPYWRCYYANTDAIIYVVDSADRDRVGISRQ 104
Query: 458 ELDSLLTDETLSNCPVLFSATR 523
EL ++L ++ L + A +
Sbjct: 105 ELATMLQEDELQGAVLAVLANK 126
Score = 32.3 bits (70), Expect = 0.40
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 141 ILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLKM 260
++ +F G+ G + ++L LGLD AGKTT+L+ L++
Sbjct: 4 VMSYFRGLFG-----AREMRILILGLDGAGKTTILYRLQV 38
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/81 (32%), Positives = 45/81 (55%)
Frame = +2
Query: 281 PTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAE 460
PTL + + + +D+GG + R W++YF + DA++++VD+ DR RL + E
Sbjct: 46 PTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLLQCSEE 105
Query: 461 LDSLLTDETLSNCPVLFSATR 523
L LL +E L+ +L A +
Sbjct: 106 LKKLLGEERLAGASLLVLANK 126
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +3
Query: 198 KLLFLGLDNAGKTTLLHMLKMID 266
++L LGLDNAGKTTL M K +D
Sbjct: 18 RILILGLDNAGKTTL--MKKFLD 38
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +2
Query: 278 VPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKA 457
+PT+ +++ G++ +D+GG + R +W Y V+AIVF+VDA D +L S+
Sbjct: 50 IPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRN 109
Query: 458 ELDSLLTDETLSNCPVL 508
EL LL L PVL
Sbjct: 110 ELMQLLDKPQLDAIPVL 126
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 141 ILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHML 254
+LDW + WK+ +L +GL N+GKTT ++++
Sbjct: 8 VLDWIRSLF-----WKEEMELTLVGLQNSGKTTFVNVI 40
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 496 LPCAVLGNKIDKPGAASEDELRHFFNL 576
+P VLGNK D PGA E +L NL
Sbjct: 123 IPVLVLGNKKDLPGALDERQLIERMNL 149
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 56.0 bits (129), Expect = 3e-08
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +2
Query: 278 VPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKA 457
+PT+ +++ G++ +D+GG + R +W Y V+AIVF+VDA D +L S+
Sbjct: 50 IPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVNAIVFMVDAADEEKLEASRN 109
Query: 458 ELDSLLTDETLSNCPVL 508
EL LL L PVL
Sbjct: 110 ELMQLLDKPQLDAIPVL 126
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 141 ILDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHML 254
+LDW + WK+ +L +GL N+GKTT ++++
Sbjct: 8 VLDWIRSLF-----WKEEMELTLVGLQNSGKTTFVNVI 40
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 496 LPCAVLGNKIDKPGAASEDELRHFFNL 576
+P VLGNK D PGA E +L NL
Sbjct: 123 IPVLVLGNKKDLPGALDERQLIERMNL 149
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/89 (28%), Positives = 46/89 (51%)
Frame = +2
Query: 257 DDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRP 436
D +A H PT+ E + + R +D+GG + R +W+ Y+ AI +++D
Sbjct: 395 DTVMAPH-PTIGFNIETIHYKNYRLNFWDVGGLPKLRHLWKHYYSNAQAIFYVIDGYAVE 453
Query: 437 RLPESKAELDSLLTDETLSNCPVLFSATR 523
R E+ EL+ +++D + CPV+ + R
Sbjct: 454 RFSEAIKELNRVMSDPLVGTCPVIVAVNR 482
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 198 KLLFLGLDNAGKTTLLHMLKMIDL 269
+++ LGLD AGKT+++ LK + +
Sbjct: 371 RVVLLGLDGAGKTSIVRRLKKVQM 394
>Z46241-6|CAA86319.1| 190|Caenorhabditis elegans Hypothetical
protein C38D4.8 protein.
Length = 190
Score = 48.4 bits (110), Expect = 6e-06
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +2
Query: 257 DDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRP 436
+ R Q VPT+ S ++ F FD+ G + R W YF + ++F++D+ DR
Sbjct: 41 ETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRL 100
Query: 437 RLPESKAELDSLL--TDETLSNCPVLFSATRLINP 535
R+ K EL ++ D P++ A ++ P
Sbjct: 101 RMELLKDELMMVMEHKDVVSRGIPIVILANKMDIP 135
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 144 LDWFTGVLGFLGLWKKSGKLLFLGLDNAGKTTLLHMLK 257
+ +F+ + GL KK ++ +GLDN+GKTT+L+ LK
Sbjct: 1 MGFFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLK 38
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 45.6 bits (103), Expect = 4e-05
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +2
Query: 338 FDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNCPVLFSA 517
+DLGG + R +W Y+ +A++F+VDA P ++ ++ +E + N PVL +
Sbjct: 74 WDLGGQESLRELWATYYDDANAMIFVVDATRSDLFPIVASQFKEVMANEIVQNIPVLVAV 133
Query: 518 TR 523
+
Sbjct: 134 NK 135
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 5/32 (15%)
Frame = +3
Query: 177 GLWKKSGK-----LLFLGLDNAGKTTLLHMLK 257
G+W+K K ++ +GLDNAGKTT L K
Sbjct: 7 GIWEKFFKKKDYYVVIVGLDNAGKTTFLEQTK 38
>Z83117-3|CAB05570.2| 356|Caenorhabditis elegans Hypothetical
protein M04C7.1 protein.
Length = 356
Score = 41.1 bits (92), Expect = 9e-04
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 257 DDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
DD L +PT+ + + I +F +D+GG + RR W F V+A +F+
Sbjct: 174 DDMLRIRIPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDNVNATIFI 226
>AY008137-1|AAG32090.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 41.1 bits (92), Expect = 9e-04
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 257 DDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
DD L +PT+ + + I +F +D+GG + RR W F V+A +F+
Sbjct: 174 DDMLRIRIPTMGVVQQTIEIKGTKFRIYDVGGQRSERRKWIHLFDNVNATIFI 226
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDR 433
E+D L VPT ++ + + F FD+GG + RR W F V A++F+ +
Sbjct: 182 EEDILKSRVPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVLFITSLSEY 241
Query: 434 PRLPESKAELDSL 472
++ A ++ +
Sbjct: 242 DQVLREDATVNRM 254
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDR 433
E+D L VPT ++ + + F FD+GG + RR W F V A++F+ +
Sbjct: 182 EEDILKSRVPTSGVIQYKIMLKNFNFRIFDVGGQRAQRRKWLHVFDDVQAVLFITSLSEY 241
Query: 434 PRLPESKAELDSL 472
++ A ++ +
Sbjct: 242 DQVLREDATVNRM 254
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +2
Query: 320 SMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNC 499
+ T +D+GG + R +W +Y+ V I++++D ES L SL ++ +
Sbjct: 68 TFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETFTESIEALHSLTSNPHVQKK 127
Query: 500 PV 505
P+
Sbjct: 128 PI 129
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +2
Query: 320 SMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDRPRLPESKAELDSLLTDETLSNC 499
+ T +D+GG + R +W +Y+ V I++++D ES L SL ++ +
Sbjct: 68 TFHLTIYDVGGDKGIRGIWSNYYAEVHGIIYVIDYSTDETFTESIEALHSLTSNPHVQKK 127
Query: 500 PV 505
P+
Sbjct: 128 PI 129
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVD---- 421
E D L VPT + + F D+GG + RR W F V +I+FLV
Sbjct: 172 EQDILRVRVPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEY 231
Query: 422 -----ACDRP-RLPESKAELDSLLTDETLSNCPVL 508
CD R+ ESKA +++T +N V+
Sbjct: 232 DQVLVECDNENRMEESKALFRTIITYPWFTNSSVI 266
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVD---- 421
E D L VPT + + F D+GG + RR W F V +I+FLV
Sbjct: 172 EQDILRVRVPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEY 231
Query: 422 -----ACDRP-RLPESKAELDSLLTDETLSNCPVL 508
CD R+ ESKA +++T +N V+
Sbjct: 232 DQVLVECDNENRMEESKALFRTIITYPWFTNSSVI 266
>AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying
defective protein 30,isoform b protein.
Length = 303
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVD---- 421
E D L VPT + + F D+GG + RR W F V +I+FLV
Sbjct: 120 EQDILRVRVPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEY 179
Query: 422 -----ACDRP-RLPESKAELDSLLTDETLSNCPVL 508
CD R+ ESKA +++T +N V+
Sbjct: 180 DQVLVECDNENRMEESKALFRTIITYPWFTNSSVI 214
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 36.7 bits (81), Expect = 0.019
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 10/95 (10%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVD---- 421
E D L VPT + + F D+GG + RR W F V +I+FLV
Sbjct: 172 EQDILRVRVPTTGIIEYPFDLEQIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVALSEY 231
Query: 422 -----ACDRP-RLPESKAELDSLLTDETLSNCPVL 508
CD R+ ESKA +++T +N V+
Sbjct: 232 DQVLVECDNENRMEESKALFRTIITYPWFTNSSVI 266
>U41995-5|AAA83462.1| 354|Caenorhabditis elegans G protein, alpha
subunit protein 3 protein.
Length = 354
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E D L + T + + S+ F FD+GG + R+ W F V+AI+F+
Sbjct: 172 EQDILLSRIKTTGIVEVKFQMKSVDFRVFDVGGQRSERKKWIHCFEDVNAIIFI 225
>AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 375
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E D L V T + + +RF FD+GG + RR W F V AI+F+
Sbjct: 175 EQDILRCRVMTTGIFETKFEVDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFV 228
>AY008126-1|AAG32079.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E D L + T + + S+ F FD+GG + R+ W F V+AI+F+
Sbjct: 172 EQDILLSRIKTTGIVEVKFQMKSVDFRVFDVGGQRSERKKWIHCFEDVNAIIFI 225
>AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein,
subunit alpha protein 1 protein.
Length = 375
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E D L V T + + +RF FD+GG + RR W F V AI+F+
Sbjct: 175 EQDILRCRVMTTGIFETKFEVDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFV 228
>AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 375
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E D L V T + + +RF FD+GG + RR W F V AI+F+
Sbjct: 175 EQDILRCRVMTTGIFETKFEVDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFV 228
>AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s)
subunit protein.
Length = 375
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E D L V T + + +RF FD+GG + RR W F V AI+F+
Sbjct: 175 EQDILRCRVMTTGIFETKFEVDKVRFHMFDVGGQRDERRKWIQCFNDVTAIIFV 228
>Z78060-4|CAB01489.1| 356|Caenorhabditis elegans Hypothetical
protein C34D1.3 protein.
Length = 356
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
+ D L V T + I + F FD+GG + RR W F V++I+F+
Sbjct: 173 DQDILYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146566-1|AAN78238.1| 350|Caenorhabditis elegans ODR-3 protein.
Length = 350
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
+ D L V T + I + F FD+GG + RR W F V++I+F+
Sbjct: 173 DQDILYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146565-1|AAN78237.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
+ D L V T + I + F FD+GG + RR W F V++I+F+
Sbjct: 173 DQDILYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146564-1|AAN78236.1| 344|Caenorhabditis elegans ODR-3 protein.
Length = 344
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
+ D L V T + I + F FD+GG + RR W F V++I+F+
Sbjct: 173 DQDILYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146563-1|AAN78235.1| 345|Caenorhabditis elegans ODR-3 protein.
Length = 345
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
+ D L V T + I + F FD+GG + RR W F V++I+F+
Sbjct: 173 DQDILYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146562-1|AAN78234.1| 342|Caenorhabditis elegans ODR-3 protein.
Length = 342
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
+ D L V T + I + F FD+GG + RR W F V++I+F+
Sbjct: 173 DQDILYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146561-1|AAN78233.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
+ D L V T + I + F FD+GG + RR W F V++I+F+
Sbjct: 173 DQDILYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146560-1|AAN78232.1| 346|Caenorhabditis elegans ODR-3 protein.
Length = 346
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
+ D L V T + I + F FD+GG + RR W F V++I+F+
Sbjct: 173 DQDILYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146559-1|AAN78231.1| 345|Caenorhabditis elegans ODR-3 protein.
Length = 345
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
+ D L V T + I + F FD+GG + RR W F V++I+F+
Sbjct: 173 DQDILYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY146558-1|AAN78230.1| 344|Caenorhabditis elegans ODR-3 protein.
Length = 344
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
+ D L V T + I + F FD+GG + RR W F V++I+F+
Sbjct: 173 DQDILYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>AY008142-1|AAG32095.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
+ D L V T + I + F FD+GG + RR W F V++I+F+
Sbjct: 173 DQDILYSRVATTGVVEVKFKIKELDFRVFDVGGQRSERRKWIHCFDNVESIIFI 226
>Z75537-6|CAA99838.2| 348|Caenorhabditis elegans Hypothetical
protein F18E2.5 protein.
Length = 348
Score = 35.1 bits (77), Expect = 0.057
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV 418
E D + +VPT + + + F FD+GG + RR W + +DAI F +
Sbjct: 172 ERDLIMAYVPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAIFFCI 226
>Z75527-9|CAA99780.2| 348|Caenorhabditis elegans Hypothetical
protein F18E2.5 protein.
Length = 348
Score = 35.1 bits (77), Expect = 0.057
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV 418
E D + +VPT + + + F FD+GG + RR W + +DAI F +
Sbjct: 172 ERDLIMAYVPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAIFFCI 226
>Z72503-4|CAA96595.1| 354|Caenorhabditis elegans Hypothetical
protein C26C6.2 protein.
Length = 354
Score = 35.1 bits (77), Expect = 0.057
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV 418
E D L V T + ++ F FD+GG + R+ W F V AI+F V
Sbjct: 172 EQDILRTRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCV 226
>AY008140-1|AAG32093.1| 354|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 354
Score = 35.1 bits (77), Expect = 0.057
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV 418
E D L V T + ++ F FD+GG + R+ W F V AI+F V
Sbjct: 172 EQDILRTRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCV 226
>AY008135-1|AAG32088.1| 348|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 348
Score = 35.1 bits (77), Expect = 0.057
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV 418
E D + +VPT + + + F FD+GG + RR W + +DAI F +
Sbjct: 172 ERDLIMAYVPTCGVQNVIFTACNQSFQLFDIGGQKIDRRKWALQYEGIDAIFFCI 226
>Z80789-3|CAB02553.1| 364|Caenorhabditis elegans Hypothetical
protein F48C11.1 protein.
Length = 364
Score = 34.7 bits (76), Expect = 0.075
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 230 EDNTLTHVEDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIV 409
EDN + ++D + + T + M F D+GG + RR W F VD I+
Sbjct: 175 EDNYVPSIQDI-VHCRISTTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCFDNVDMIL 233
Query: 410 FLVDACDRPRL-PE 448
F+V D +L PE
Sbjct: 234 FIVSMSDYDQLDPE 247
>AY008129-1|AAG32082.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 34.7 bits (76), Expect = 0.075
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +2
Query: 230 EDNTLTHVEDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIV 409
EDN + ++D + + T + M F D+GG + RR W F VD I+
Sbjct: 175 EDNYVPSIQDI-VHCRISTTGINELAFNYKKMDFKMVDVGGQRSERRKWIHCFDNVDMIL 233
Query: 410 FLVDACDRPRL-PE 448
F+V D +L PE
Sbjct: 234 FIVSMSDYDQLDPE 247
>U55367-2|AAA97988.2| 356|Caenorhabditis elegans G protein, alpha
subunit protein 10 protein.
Length = 356
Score = 34.3 bits (75), Expect = 0.099
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 278 VPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
VPT E+ + +++ D GG + RR W +F DA++F+
Sbjct: 182 VPTTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFFDEADAVLFV 227
>AY008132-1|AAG32085.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 34.3 bits (75), Expect = 0.099
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 278 VPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
VPT E+ + +++ D GG + RR W +F DA++F+
Sbjct: 182 VPTTGVAQVEVIMNNIKLMICDCGGQRSERRKWYHFFDEADAVLFV 227
>Z75549-9|CAA99914.1| 357|Caenorhabditis elegans Hypothetical
protein T19C4.6 protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E+D L VPT+ +I F FD+GG + R+ W F A++++
Sbjct: 172 ENDILHTRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFDDAKAMIYV 225
>Z70686-6|CAA94612.1| 352|Caenorhabditis elegans Hypothetical
protein R10H10.5 protein.
Length = 352
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E D L + T T + + F D+GG + R+ W F V+AI+F+
Sbjct: 170 EQDLLRTRIKTTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDNVNAIIFI 223
>M38250-1|AAA28061.1| 354|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 354
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E D L + T + + S+ F D+GG + R+ W F V+AI+F+
Sbjct: 172 EQDILLSRIKTTGIVEVKFQMKSVDFRVLDVGGQRSERKKWIHCFEDVNAIIFI 225
>M38249-1|AAA28060.1| 357|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E+D L VPT+ +I F FD+GG + R+ W F A++++
Sbjct: 172 ENDILHTRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFDDAKAMIYV 225
>AY008138-1|AAG32091.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVF------- 412
+DD L + T + F FD+GG + R+ W F V A++F
Sbjct: 171 QDDILRTRIKTTGIVETQFVYKDRLFLVFDVGGQRSERKKWIHCFEDVTALIFCVALSEY 230
Query: 413 ---LVDACDRPRLPESKAELDSLLTDE 484
LV+ C R+ ES DS+ ++
Sbjct: 231 DMVLVEDCQTNRMRESLKLFDSICNNK 257
>AY008130-1|AAG32083.1| 352|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 352
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E D L + T T + + F D+GG + R+ W F V+AI+F+
Sbjct: 170 EQDLLRTRIKTTGITEVLFELKGLTFRVIDVGGQRSERKKWIHCFDNVNAIIFI 223
>AY008124-1|AAG32077.1| 357|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E+D L VPT+ +I F FD+GG + R+ W F A++++
Sbjct: 172 ENDILHTRVPTMGVIEVNFTIKGKFFRVFDVGGQRSQRKKWIHCFDDAKAMIYV 225
>AC024877-8|AAF60904.1| 357|Caenorhabditis elegans G protein, alpha
subunit protein 16 protein.
Length = 357
Score = 33.9 bits (74), Expect = 0.13
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVF------- 412
+DD L + T + F FD+GG + R+ W F V A++F
Sbjct: 171 QDDILRTRIKTTGIVETQFVYKDRLFLVFDVGGQRSERKKWIHCFEDVTALIFCVALSEY 230
Query: 413 ---LVDACDRPRLPESKAELDSLLTDE 484
LV+ C R+ ES DS+ ++
Sbjct: 231 DMVLVEDCQTNRMRESLKLFDSICNNK 257
>X53156-1|CAA37312.1| 356|Caenorhabditis elegans G-protein a-2
protein.
Length = 356
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 314 IGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
I ++F FD+GG + R+ W F V+AI+F+
Sbjct: 194 IKKVKFRVFDVGGQRSERKKWIHCFEDVNAIIFI 227
>U41996-6|AAA83475.1| 356|Caenorhabditis elegans G protein, alpha
subunit protein 2 protein.
Length = 356
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 314 IGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
I ++F FD+GG + R+ W F V+AI+F+
Sbjct: 194 IKKVKFRVFDVGGQRSERKKWIHCFEDVNAIIFI 227
>AY008127-1|AAG32080.1| 359|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 359
Score = 33.1 bits (72), Expect = 0.23
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDR 433
+DD L V + + F FD+GG + R+ W F +V A++F V +
Sbjct: 174 QDDILRARVKSTGIVETTFMYKDLCFKMFDVGGQRSERKKWIHCFDSVTAVIFCVALSEY 233
Query: 434 P-RLPE----SKAELDSLLTDETLSNCPVLFSATRLI 529
RL E ++ L D ++NC F+ T +I
Sbjct: 234 DLRLAEDQTMNRMHESMQLFDSIVNNC--WFTETSII 268
>AY008125-1|AAG32078.1| 356|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 356
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 314 IGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
I ++F FD+GG + R+ W F V+AI+F+
Sbjct: 194 IKKVKFRVFDVGGQRSERKKWIHCFEDVNAIIFI 227
>AF036706-13|AAK39279.2| 359|Caenorhabditis elegans G protein,
alpha subunit protein 4 protein.
Length = 359
Score = 33.1 bits (72), Expect = 0.23
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDACDR 433
+DD L V + + F FD+GG + R+ W F +V A++F V +
Sbjct: 174 QDDILRARVKSTGIVETTFMYKDLCFKMFDVGGQRSERKKWIHCFDSVTAVIFCVALSEY 233
Query: 434 P-RLPE----SKAELDSLLTDETLSNCPVLFSATRLI 529
RL E ++ L D ++NC F+ T +I
Sbjct: 234 DLRLAEDQTMNRMHESMQLFDSIVNNC--WFTETSII 268
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 198 KLLFLGLDNAGKTTLLHMLKMIDL 269
++L LGLDNAGKTT+L L D+
Sbjct: 19 RILLLGLDNAGKTTILKQLSSEDV 42
>M38251-1|AAA28059.1| 354|Caenorhabditis elegans G-o protein alpha
subunit protein.
Length = 354
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLV 418
E L V T + ++ F FD+GG + R+ W F V AI+F V
Sbjct: 172 EQHILRTRVKTTGIVEVHFTFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCV 226
>AF039041-7|ABM01867.1| 335|Caenorhabditis elegans G protein, alpha
subunit protein 18 protein.
Length = 335
Score = 32.3 bits (70), Expect = 0.40
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +2
Query: 302 EELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVD---ACDRP---RLPESKAEL 463
E ++ +F ++ GH R W DYF + +VF++D CD + E
Sbjct: 174 ENVTCQGYKFELLEMPGHHLWRAKWADYFDDPNLVVFVIDLSELCDPAFYNYFQKGYLEN 233
Query: 464 DSLLTDETLSNCPVL 508
++ E+L N PVL
Sbjct: 234 KTVTVFESLVNNPVL 248
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 31.1 bits (67), Expect = 0.92
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Frame = -1
Query: 363 AC*CPPRSNVVKRIL---PIDSSSDVGCKVGTC*ASLSSSTCVRVLSS---LHCQVPETR 202
AC C +N+ R+ P+ S+S GC+ + A+ STC SS C++
Sbjct: 2 ACKCSTSTNISNRVCSCSPLPSTSSCGCQASSSCANSCRSTCRPTCSSSGGFGCRMNCQN 61
Query: 201 ACLTFSIDQEIPT 163
C+ Q PT
Sbjct: 62 TCVNACNKQFAPT 74
>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
protein R11G1.1 protein.
Length = 1656
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 235 VFPALSSPRNKSLPDFFHRPRNPNTP 158
+ P ++PR S+P FF P++P+ P
Sbjct: 466 ILPTFATPRPLSIPSFFTTPQSPHRP 491
>U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical
protein C05D10.3 protein.
Length = 598
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +3
Query: 189 KSGKLL-FLGLDNAGKTTLLHMLKMIDLLNM 278
+SGKLL LG AGKTTL+++L +L N+
Sbjct: 18 ESGKLLAILGSSGAGKTTLMNVLTSRNLTNL 48
>Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical
protein T05G5.1 protein.
Length = 411
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Frame = -3
Query: 580 DTD*KSDVVRLHWQHRVY---QSCCREQHRAVTERLVSEQRV 464
D + SD R QH Y ++ REQ RA ER + EQRV
Sbjct: 127 DRERASDEERRRQQHEQYWKEETARREQQRAEAERRIQEQRV 168
>U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical
protein T26A5.1 protein.
Length = 613
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 183 WKKSGKLLFL-GLDNAGKTTLLHML 254
+ KSG+LL L G AGKTTLL+ML
Sbjct: 57 YAKSGELLALMGASGAGKTTLLNML 81
>AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 363
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E D L VPT T E D+GG + +R W F V+ ++F+
Sbjct: 168 EMDVLRARVPTTGITEIEFPFKQASLRMVDVGGQRSEQRKWIHCFDNVNGVLFI 221
>AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, alpha
subunit protein 11 protein.
Length = 363
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +2
Query: 254 EDDRLAQHVPTLHPTSEELSIGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFL 415
E D L VPT T E D+GG + +R W F V+ ++F+
Sbjct: 168 EMDVLRARVPTTGITEIEFPFKQASLRMVDVGGQRSEQRKWIHCFDNVNGVLFI 221
>AJ320257-1|CAC44622.1| 877|Caenorhabditis elegans putative
telomere binding protein protein.
Length = 877
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -2
Query: 536 PGLSILLPRTAQGSY*ASRQ*ATSLVQP-W---TPADVAGHTRRPGTLWRPPR 390
P LSI+L RT Y + L+ P W A +A +TRR GT PPR
Sbjct: 669 PTLSIILHRTINTDYDDEDEDPHRLLVPEWRRMVDARIAANTRRIGTTREPPR 721
>AF400665-1|AAL28024.1| 877|Caenorhabditis elegans CLK-2 protein.
Length = 877
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -2
Query: 536 PGLSILLPRTAQGSY*ASRQ*ATSLVQP-W---TPADVAGHTRRPGTLWRPPR 390
P LSI+L RT Y + L+ P W A +A +TRR GT PPR
Sbjct: 669 PTLSIILHRTINTDYDDEDEDPHRLLVPEWRRMVDARIAANTRRIGTTREPPR 721
>AC006605-5|AAK85444.3| 877|Caenorhabditis elegans Clock
(biological timing) abnormalityprotein 2 protein.
Length = 877
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = -2
Query: 536 PGLSILLPRTAQGSY*ASRQ*ATSLVQP-W---TPADVAGHTRRPGTLWRPPR 390
P LSI+L RT Y + L+ P W A +A +TRR GT PPR
Sbjct: 669 PTLSIILHRTINTDYDDEDEDPHRLLVPEWRRMVDARIAANTRRIGTTREPPR 721
>Z81065-1|CAB02968.1| 399|Caenorhabditis elegans Hypothetical
protein F16C3.1 protein.
Length = 399
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 321 LPIDSSSDVGCKVGTC*ASLSSSTCVRVLSSLHC 220
LP+ S S++GCK + A S CV ++S + C
Sbjct: 85 LPLYSESELGCKFFSFLAHFSDFICVWMISLISC 118
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +3
Query: 198 KLLFLGLDNAGKTTLLHMLKMIDLLNMYL 284
K++ LG GKT+L++ ++ DL+N Y+
Sbjct: 11 KVIILGDSGVGKTSLMNQYEIGDLMNQYV 39
>U40953-5|AAB52648.1| 385|Caenorhabditis elegans G protein, alpha
subunit protein 5 protein.
Length = 385
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 341 DLGGHQQARRVWRDYFPAVDAIVFL 415
D+GG + RR W +F V A++F+
Sbjct: 199 DVGGQKTERRKWIHFFEGVTAVMFV 223
>U39855-2|AAA81081.2| 355|Caenorhabditis elegans G protein, alpha
subunit protein 12 protein.
Length = 355
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Frame = +2
Query: 314 IGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDAC--------DR--PRLPESKAEL 463
I + F D+GG + R+ W F + +I+F+V + DR R+ ES++
Sbjct: 192 INKIPFRFIDVGGQRSQRQKWFQCFTDITSILFMVASNEYDQVILEDRRTNRVVESRSVF 251
Query: 464 DSLLTDETLSNCPVL 508
++++ + SN ++
Sbjct: 252 ETIVNNRAFSNVSII 266
>AY008134-1|AAG32087.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/75 (24%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Frame = +2
Query: 314 IGSMRFTTFDLGGHQQARRVWRDYFPAVDAIVFLVDAC--------DR--PRLPESKAEL 463
I + F D+GG + R+ W F + +I+F+V + DR R+ ES++
Sbjct: 192 INKIPFRFIDVGGQRSQRQKWFQCFTDITSILFMVASNEYDQVILEDRRTNRVVESRSVF 251
Query: 464 DSLLTDETLSNCPVL 508
++++ + SN ++
Sbjct: 252 ETIVNNRAFSNVSII 266
>AY008128-1|AAG32081.1| 385|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 385
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +2
Query: 341 DLGGHQQARRVWRDYFPAVDAIVFL 415
D+GG + RR W +F V A++F+
Sbjct: 199 DVGGQKTERRKWIHFFEGVTAVMFV 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,493,635
Number of Sequences: 27780
Number of extensions: 343825
Number of successful extensions: 1099
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1095
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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