Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021210
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.8  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.4  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   3.2  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   7.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.4  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   7.4  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +3

Query: 63  LMLMLTIKFIKLLSNTKISKLINIFVILPW 152
           ++L L++K I  ++   + K +NIF I PW
Sbjct: 3   MILKLSLKDIVFIN--PLVKYLNIFFITPW 30


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 535 KEKQNCYFYLIPSIFIFIYFLNL 603
           + ++N Y  L+  +F+F YF+ L
Sbjct: 131 ESERNDYVSLLQLVFVFCYFIYL 153


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 511 FFCLY*VYFIQNFRSFIYRLRRY 443
           F C + V + QN+  F Y+L  Y
Sbjct: 146 FLCRHTVEYFQNYIHFFYQLLLY 168


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 214 LQYPPPPP 191
           L YPPPPP
Sbjct: 160 LHYPPPPP 167


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 568 ELNKNNNFVFPLSVPPSD 515
           E  +NN  + P++ PPSD
Sbjct: 34  EYYENNQALPPITYPPSD 51


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 296 VSYIQLAVISYTTMLLFCNNVYHHLKDSLLIT 391
           + Y   A I +T  LLF   +YH     ++ T
Sbjct: 146 IYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFT 177


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 568 ELNKNNNFVFPLSVPPSD 515
           E  +NN  + P++ PPSD
Sbjct: 25  EYYENNQALPPITYPPSD 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,932
Number of Sequences: 336
Number of extensions: 3216
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)