Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021209
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   4.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.6  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.1  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   6.1  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   6.1  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   6.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   8.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.1  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/17 (35%), Positives = 15/17 (88%)
 Frame = -2

Query: 430 VQKVQSPIHQISMQVVH 380
           V+K+++ +HQ++ +V+H
Sbjct: 502 VEKLETLVHQLNTEVLH 518


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 9/62 (14%)
 Frame = -1

Query: 650 SLHYQGIPQVSICPLISCQAF---------GTRFLHTFENELQIDRQLSTSALIGIVVCS 498
           S +Y G+P V+ CP+     F         GT F H      ++D       L G VV  
Sbjct: 209 SQYYDGVPFVTQCPIQQGNTFRYQWIAGNAGTHFWHAHTGLQKMD------GLYGSVVIR 262

Query: 497 QP 492
           QP
Sbjct: 263 QP 264


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 9/62 (14%)
 Frame = -1

Query: 650 SLHYQGIPQVSICPLISCQAF---------GTRFLHTFENELQIDRQLSTSALIGIVVCS 498
           S +Y G+P V+ CP+     F         GT F H      ++D       L G VV  
Sbjct: 209 SQYYDGVPFVTQCPIQQGNTFRYQWIAGNAGTHFWHAHTGLQKMD------GLYGSVVIR 262

Query: 497 QP 492
           QP
Sbjct: 263 QP 264


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 14/45 (31%), Positives = 18/45 (40%)
 Frame = -1

Query: 314 GGS*TSLPSIV*KPTSLNSVWLRLPSICLASSEPYGCNPHDISHH 180
           GG   S P      T  +  W    SI   SS+P G   H  ++H
Sbjct: 159 GGDPASSPGAAAGRTGNSLSWNNPCSINSTSSQPVGTQIHQQTNH 203


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +1

Query: 697 YHLWFTRNQLLFPRSGMCK 753
           YHL    N +  P SG C+
Sbjct: 584 YHLSCAENMMFDPMSGKCE 602


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 215 PYGCNPHDISH 183
           P G NPHDI++
Sbjct: 749 PVGTNPHDINN 759


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 215 PYGCNPHDISH 183
           P G NPHDI++
Sbjct: 641 PVGTNPHDINN 651


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 629 PQVSICPLISCQAFGTRF 576
           P V+ C L+SC+ F T +
Sbjct: 11  PGVNRCKLLSCKDFDTLY 28


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 58  TSFCKNGNGK 87
           T FC+NGN K
Sbjct: 695 TCFCENGNNK 704


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 254 WLRLPSICLASSEPYGCNP 198
           W+ +  IC+++  P  C+P
Sbjct: 478 WMPVMRICVSAWNPKDCDP 496


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,678
Number of Sequences: 336
Number of extensions: 4587
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)