Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021209
         (758 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p pro...   105   5e-23
AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA ...   105   5e-23

>AY118368-1|AAM48397.1|  478|Drosophila melanogaster RE11562p
           protein.
          Length = 478

 Score =  105 bits (253), Expect = 5e-23
 Identities = 49/94 (52%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = +1

Query: 226 ARQIEGSRSHTELRDVGFQTI-DGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQPALKS 402
           A ++    + TEL DVG QT+ +G+ +            DP K TV +YGHLDVQPALK 
Sbjct: 53  ADRLRSLGAETELADVGQQTLPNGQIIPLPKVLLGTLGKDPSKKTVLVYGHLDVQPALKE 112

Query: 403 DGWETEPFELVERNEKLYGRGSTDDKGPVLGWLH 504
           DGW T PFEL E + KL+GRG++DDKGPVL W+H
Sbjct: 113 DGWNTNPFELTEVDGKLFGRGASDDKGPVLCWIH 146



 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 31/53 (58%), Positives = 43/53 (81%)
 Frame = +2

Query: 593 LDSLLMDKLKPEGFLDSVDYVCISDNYWLGTTKPCITYGLRGISYYFLEVECA 751
           LD LL+++   + FL  VD+VCISDNYWLG  +PC+TYGLRG++Y+ +EVEC+
Sbjct: 177 LDDLLLER--KDNFLADVDFVCISDNYWLGKKRPCLTYGLRGLAYFQVEVECS 227



 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 22/54 (40%), Positives = 30/54 (55%)
 Frame = +2

Query: 92  LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGA 253
           L + F +VD  K+ Y   LK  V I SVS   + R +  RMV W  D+L+ +GA
Sbjct: 8   LQKFFAFVDGKKEDYIGALKTVVGIQSVSAWPEKRGEIGRMVEWTADRLRSLGA 61



 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = +3

Query: 492 WLAAYHNAYKGTGAELPVNLKFIFECMEESGSEGL 596
           W+ A   AY+     LPVN+KF+FE MEESGSEGL
Sbjct: 144 WIHAIE-AYQKLNIALPVNVKFVFEGMEESGSEGL 177


>AE013599-97|AAF57318.2|  478|Drosophila melanogaster CG17337-PA
           protein.
          Length = 478

 Score =  105 bits (253), Expect = 5e-23
 Identities = 49/94 (52%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
 Frame = +1

Query: 226 ARQIEGSRSHTELRDVGFQTI-DGKDVQXXXXXXXXXXNDPKKNTVCIYGHLDVQPALKS 402
           A ++    + TEL DVG QT+ +G+ +            DP K TV +YGHLDVQPALK 
Sbjct: 53  ADRLRSLGAETELADVGQQTLPNGQIIPLPKVLLGTLGKDPSKKTVLVYGHLDVQPALKE 112

Query: 403 DGWETEPFELVERNEKLYGRGSTDDKGPVLGWLH 504
           DGW T PFEL E + KL+GRG++DDKGPVL W+H
Sbjct: 113 DGWNTNPFELTEVDGKLFGRGASDDKGPVLCWIH 146



 Score = 76.6 bits (180), Expect = 3e-14
 Identities = 31/53 (58%), Positives = 43/53 (81%)
 Frame = +2

Query: 593 LDSLLMDKLKPEGFLDSVDYVCISDNYWLGTTKPCITYGLRGISYYFLEVECA 751
           LD LL+++   + FL  VD+VCISDNYWLG  +PC+TYGLRG++Y+ +EVEC+
Sbjct: 177 LDDLLLER--KDNFLADVDFVCISDNYWLGKKRPCLTYGLRGLAYFQVEVECS 227



 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 22/54 (40%), Positives = 30/54 (55%)
 Frame = +2

Query: 92  LPEIFKYVDQNKDSYKQLLKEAVAIPSVSCDVKYRADCIRMVHWMQDKLKEVGA 253
           L + F +VD  K+ Y   LK  V I SVS   + R +  RMV W  D+L+ +GA
Sbjct: 8   LQKFFAFVDGKKEDYIGALKTVVGIQSVSAWPEKRGEIGRMVEWTADRLRSLGA 61



 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 21/35 (60%), Positives = 25/35 (71%)
 Frame = +3

Query: 492 WLAAYHNAYKGTGAELPVNLKFIFECMEESGSEGL 596
           W+ A   AY+     LPVN+KF+FE MEESGSEGL
Sbjct: 144 WIHAIE-AYQKLNIALPVNVKFVFEGMEESGSEGL 177


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,844,191
Number of Sequences: 53049
Number of extensions: 770440
Number of successful extensions: 2016
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2016
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)