Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021207
(537 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 202 1e-52
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 202 2e-52
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 198 2e-51
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 197 4e-51
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 163 6e-41
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 9e-27
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 116 1e-26
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 116 1e-26
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 114 4e-26
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 7e-26
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 9e-26
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 113 9e-26
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 1e-25
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 2e-25
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 6e-25
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 3e-19
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 91 5e-19
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 89 2e-18
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 86 1e-17
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 84 8e-17
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 66 2e-11
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 60 1e-09
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 56 1e-08
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 2e-07
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 46 2e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 35 0.037
SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4) 33 0.15
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 0.79
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 1.8
SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 3.2
SB_498| Best HMM Match : DUF1067 (HMM E-Value=5.8) 29 3.2
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 5.6
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 28 5.6
SB_52268| Best HMM Match : SecA_PP_bind (HMM E-Value=0.33) 28 5.6
SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09) 27 7.3
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0) 27 9.7
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 27 9.7
SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 202 bits (493), Expect = 1e-52
Identities = 93/94 (98%), Positives = 93/94 (98%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 57 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 116
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LDVVRKEAESCDCLQGFQLTHSLG GTGSGMGTL
Sbjct: 117 LDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL 150
Score = 116 bits (280), Expect = 9e-27
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNE 247
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNE
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNE 53
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 202 bits (492), Expect = 2e-52
Identities = 92/94 (97%), Positives = 93/94 (98%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 270 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 329
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LDVVRKEAESCDCLQGFQLTHSLG GTGSGMGTL
Sbjct: 330 LDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTL 363
Score = 122 bits (293), Expect = 2e-28
Identities = 54/62 (87%), Positives = 56/62 (90%)
Frame = +2
Query: 62 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYY 241
+YSS KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 242 NE 247
NE
Sbjct: 265 NE 266
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 198 bits (483), Expect = 2e-51
Identities = 88/94 (93%), Positives = 93/94 (98%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GKYVPR++L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSV
Sbjct: 57 GKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSV 116
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LDVVRKEAESCDC+QGFQLTHSLG GTGSGMGTL
Sbjct: 117 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMGTL 150
Score = 114 bits (274), Expect = 5e-26
Identities = 49/53 (92%), Positives = 51/53 (96%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNE 247
MREIV +QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNE
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNE 53
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 197 bits (481), Expect = 4e-51
Identities = 90/94 (95%), Positives = 92/94 (97%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GKYVPRA+LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LDVVRKEAESCDC+QGFQLTHSLG GTGSGM TL
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTL 95
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 163 bits (397), Expect = 6e-41
Identities = 70/94 (74%), Positives = 83/94 (88%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
G+YVPR+ILVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
DV+RKEAE+CDC+QG QL +LG GTGSG+GTL
Sbjct: 73 FDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTL 106
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 116 bits (280), Expect = 9e-27
Identities = 50/53 (94%), Positives = 51/53 (96%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNE 247
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNE
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNE 53
Score = 81.0 bits (191), Expect = 6e-16
Identities = 36/36 (100%), Positives = 36/36 (100%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 363
GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 57 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 116 bits (279), Expect = 1e-26
Identities = 52/94 (55%), Positives = 67/94 (71%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GK+VPRA+ VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD V
Sbjct: 59 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLV 118
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LD +RK A+ C LQGF + HS G GTGSG +L
Sbjct: 119 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSL 152
Score = 116 bits (278), Expect = 2e-26
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 492 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLV 551
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LD +RK A+ C LQGF + HS G GTGSG +L
Sbjct: 552 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSL 585
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/42 (45%), Positives = 22/42 (52%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL 214
MRE + I GQ G QIG WE+ EHGI P G D +
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 42
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL 214
RE + I GQ G QIG WE+ EHGI P G D +
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 475
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 116 bits (279), Expect = 1e-26
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 644 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLV 703
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LD +RK A+ C LQGF + HS G GTGSG +L
Sbjct: 704 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSL 737
Score = 115 bits (277), Expect = 2e-26
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 123 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 182
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LD +RK A+ C LQGF + HS G GTGSG +L
Sbjct: 183 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSL 216
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL 214
+RE + I GQ G QIG WE+ EHGI P G D +
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 627
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL 214
RE + I GQ G QIG WE+ EHGI P G D +
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 554
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL 214
RE + + GQ G QIG WE+ EHGI P G D +
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 106
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSV 315
GK+VPRA+ VDLEP + +
Sbjct: 571 GKHVPRAVFVDLEPTVRECI 590
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 114 bits (275), Expect = 4e-26
Identities = 50/94 (53%), Positives = 67/94 (71%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 58 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLV 117
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LD +RK A+ C LQGF + HS G GTGSG +L
Sbjct: 118 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSL 151
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL 214
RE + I GQ G QIG WE+ EHGI P G D +
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 41
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 113 bits (273), Expect = 7e-26
Identities = 49/94 (52%), Positives = 67/94 (71%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GK+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+V
Sbjct: 59 GKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTV 118
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LD +RK A+ C LQGF + HS G GTGSG +L
Sbjct: 119 LDRLRKLADGCTGLQGFLIFHSFGGGTGSGFSSL 152
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL 214
MRE + + GQ G Q+G WE+ EHGI P G D +
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 113 bits (272), Expect = 9e-26
Identities = 48/94 (51%), Positives = 66/94 (70%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+V
Sbjct: 477 GKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNV 536
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LD +RK A+ C LQGF + HS G GTGSG L
Sbjct: 537 LDRIRKLADQCSGLQGFLVFHSFGGGTGSGFSAL 570
Score = 110 bits (265), Expect = 6e-25
Identities = 48/94 (51%), Positives = 66/94 (70%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GK+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ V
Sbjct: 44 GKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIV 103
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LD +RK A+ C LQGF + HS G GTGSG +L
Sbjct: 104 LDRLRKLADQCTGLQGFLIFHSFGGGTGSGFSSL 137
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL 214
RE V I GQ G Q+G WE+ EHGI P G D +
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 460
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 113 bits (272), Expect = 9e-26
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 59 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLV 118
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LD RK A+ C LQGF + HS G GTGSG +L
Sbjct: 119 LDRCRKLADQCTGLQGFLIFHSFGGGTGSGFASL 152
Score = 40.7 bits (91), Expect = 7e-04
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL 214
MRE + I GQ G Q+G WE+ EHGI P G D +
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 42
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 113 bits (271), Expect = 1e-25
Identities = 49/94 (52%), Positives = 66/94 (70%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GK+VPRA+ DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 863 GKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLV 922
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LD +RK A+ C LQGF + HS G GTGSG +L
Sbjct: 923 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSL 956
Score = 112 bits (269), Expect = 2e-25
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D V
Sbjct: 430 GKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIV 489
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LD +RK A+ C LQGF + HS G GTGSG +L
Sbjct: 490 LDRLRKLADGCTGLQGFLIFHSFGGGTGSGFTSL 523
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL 214
RE + I GQ G QIG WE+ EHGI P G D +
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 413
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 92 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL 214
RE + + GQ G Q+G WE+ EHGI P G D +
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTI 846
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 112 bits (269), Expect = 2e-25
Identities = 48/94 (51%), Positives = 66/94 (70%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GKYVPRA+LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V
Sbjct: 970 GKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVV 1029
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
+D +RK + C LQGF + HS G GTGSG +L
Sbjct: 1030 MDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASL 1063
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 110 bits (265), Expect = 6e-25
Identities = 48/94 (51%), Positives = 65/94 (69%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GK+VPRA+ VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D
Sbjct: 24 GKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLA 83
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LD +RK A+ C LQGF + HS G GTGSG +L
Sbjct: 84 LDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSL 117
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 91.9 bits (218), Expect = 3e-19
Identities = 40/77 (51%), Positives = 53/77 (68%)
Frame = +1
Query: 307 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGF 486
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 487 QLTHSLGVGTGSGMGTL 537
+ HS G GTGSG +L
Sbjct: 73 LIFHSFGGGTGSGFSSL 89
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 91.1 bits (216), Expect = 5e-19
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = +1
Query: 367 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
Q+ A NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ+ HSLG GTGSG+G+L
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSL 58
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 89.4 bits (212), Expect = 2e-18
Identities = 39/75 (52%), Positives = 52/75 (69%)
Frame = +1
Query: 313 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 492
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK A+ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 493 THSLGVGTGSGMGTL 537
HS G GTGSG +L
Sbjct: 63 FHSFGGGTGSGFSSL 77
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 86.2 bits (204), Expect = 1e-17
Identities = 44/94 (46%), Positives = 57/94 (60%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 435
GK+VPRA+ VDLEP + P+ + G+ A NN+A+GHYT G + VD V
Sbjct: 59 GKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHYTIGKQQVDQV 108
Query: 436 LDVVRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
LD +RK A+ C LQGF + HS G GTGSG +L
Sbjct: 109 LDRLRKLADQCSGLQGFFIFHSFGGGTGSGFSSL 142
Score = 41.5 bits (93), Expect = 4e-04
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD 205
MRE + I GQ G QIG WE+ EHGI P G D
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSD 39
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 83.8 bits (198), Expect = 8e-17
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +1
Query: 313 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQL 492
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 493 THSLGVGTGSGMGTL 537
HS G GTGSG +L
Sbjct: 63 FHSFGGGTGSGFSSL 77
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 66.1 bits (154), Expect = 2e-11
Identities = 37/90 (41%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +1
Query: 271 RAILVDLEPGTMDSVRS--GPFGQIFRPDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLD 441
RA+ +D+E + S G P F Q G+GNNWA G G + +D VLD
Sbjct: 67 RAVSIDMESKVISQTLSEASKSGTWRYPKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLD 126
Query: 442 VVRKEAESCDCLQGFQLTHSLGVGTGSGMG 531
+V++E E CD L GF SL GTGSG+G
Sbjct: 127 LVQREVEKCDRLDGFLTLLSLAGGTGSGVG 156
Score = 32.3 bits (70), Expect = 0.26
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 98 IVHIQAGQCGNQIGAKFWEIISDE 169
IV +Q GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 59.7 bits (138), Expect = 1e-09
Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Frame = +1
Query: 271 RAILVDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVD 429
R + VD E + S R G GQ R N + G+ G GNN+A G++ G L+
Sbjct: 40 RCVCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLH 98
Query: 430 SVLDVVRKEAESCDCLQGFQLTHSLGVGTGSGMG 531
+D +RKE E CD G + HSL GTGSG+G
Sbjct: 99 MTMDAMRKEVERCDSFAGTIVMHSLTGGTGSGLG 132
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 1e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +1
Query: 313 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 453
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 445 VRKEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
+RKEAE CD +QGFQL HSLG GTGSG+GTL
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTL 31
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 313 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 453
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +1
Query: 271 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR 450
RA+L+D+E G ++++ GP +F + SG GNNW + + + VV+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNWYT-LLCKCFAIRKDIFVVVQ 134
Query: 451 KEAESCDCLQGFQL-THSLGVGTGSGMGT 534
E C + ++ GTGSG+GT
Sbjct: 135 SFKEWTLCFEAKEMYLEDQNKGTGSGVGT 163
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 146 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 247
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNE 247
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSE 55
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 256 GKYVPRAILVDLEPGTMDSVR 318
GK+VPRA+ VDLEP + ++
Sbjct: 59 GKHVPRAVFVDLEPSVVGRMK 79
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 41.9 bits (94), Expect = 3e-04
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = +2
Query: 89 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER 226
MRE + I GQ G QIG WE+ EHGI P G H SD +R
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADR 239
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 451 KEAESCDCLQGFQLTHSLGVGTGSGMGTL 537
K A+ C LQGF + HS G GTGSG +L
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSL 283
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 35.1 bits (77), Expect = 0.037
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +1
Query: 457 AESCDCLQGFQLTHSLGVGTGSGMGTL 537
A+ C LQGF + HS G GTGSG +L
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSL 27
>SB_49423| Best HMM Match : Dicty_CAD (HMM E-Value=6.4)
Length = 384
Score = 33.1 bits (72), Expect = 0.15
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -1
Query: 483 SLEAITRFRFLSNDV*N*IDELSTLRVVSLGPVVTGAGLSEDEVVRTEDLSERSRADRVH 304
S++A R R +S V I +L V++L PV+ G +++D V + RSR R H
Sbjct: 204 SVDATLRGRDISAGVYQEIRDLGGAGVIALKPVMRGPDINDDGSVCQKRRPNRSRCPRRH 263
Query: 303 GAGL 292
G+
Sbjct: 264 RCGI 267
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 0.79
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 464 DSASFRTTSKTESTSSAPSV*CPLAQL 384
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = -3
Query: 277 WRGARTCRG-GFIVVYIDALQLQVRVPM-VSTGGVDAVLVGDDLPEL 143
W + RG I VY DA++LQV P+ G+D + V D EL
Sbjct: 36 WNYRASLRGIDLITVYADAVELQVTYPLRAPLRGIDLITVYADAVEL 82
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 401 CPLAQLLPAPDCPKTKLSGRKICP 330
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 401 CPLAQLLPAPDCPKTKLSGRKICP 330
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 5.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 401 CPLAQLLPAPDCPKTKLSGRKICP 330
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 401 CPLAQLLPAPDCPKTKLSGRKICP 330
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 401 CPLAQLLPAPDCPKTKLSGRKICP 330
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 401 CPLAQLLPAPDCPKTKLSGRKICP 330
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 401 CPLAQLLPAPDCPKTKLSGRKICP 330
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.5 bits (58), Expect = 7.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 401 CPLAQLLPAPDCPKTKLSGRKICP 330
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 401 CPLAQLLPAPDCPKTKLSGRKICP 330
CPL ++L P CP ++ +CP
Sbjct: 7 CPLKEMLNTPLCPLKEMLDTPLCP 30
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 401 CPLAQLLPAPDCPKTKLSGRKICP 330
CPL ++L P CP ++ +CP
Sbjct: 29 CPLKKMLNTPLCPLKEMLNTPLCP 52
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 401 CPLAQLLPAPDCPKTKLSGRKICP 330
CPL ++L P CP ++ +CP
Sbjct: 40 CPLKEMLNTPLCPLKEMLDTPLCP 63
Score = 27.1 bits (57), Expect = 9.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 401 CPLAQLLPAPDCPKTKLSGRKICP 330
CPL ++L P CP ++ +CP
Sbjct: 161 CPLKEMLNTPLCPLKEMLDAPLCP 184
>SB_4335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 948
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 332 PKGPERTESMVPGSKSTRMARGTYLP 255
PKGPER E+ + R +G YLP
Sbjct: 838 PKGPERKEACLRALGDIRAEKGVYLP 863
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 377 APDCPKTKLSGRKICPKGPERTESMVPGSKST 282
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_498| Best HMM Match : DUF1067 (HMM E-Value=5.8)
Length = 185
Score = 28.7 bits (61), Expect = 3.2
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = -2
Query: 521 EPVPTPSECVSWNPWRQSHDSASFRTTSKTESTSSAPSV*--CPLAQLLPAPDCPKT-KL 351
+P P S+ +S +P S + +S TT ++ ++ + CPL +L CP+T L
Sbjct: 108 DPSPISSD-MSTDPTPISKEMSSDPTTISSDKSTDPTLISRTCPLTLVLLVRTCPRTLSL 166
Query: 350 SGRKICPK 327
S RK CP+
Sbjct: 167 SVRK-CPR 173
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 427 DSVLDVVRKEAESCDCLQGFQLTHSLGVGTGSGM 528
D+ D +R AE CD LQGFQ+ + G G M
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQILADVHNGFGGLM 253
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 427 DSVLDVVRKEAESCDCLQGFQLTHSLGVGTGSGM 528
D+ D +R AE CD LQGFQ+ + G G M
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQILADVHNGFGGLM 253
>SB_52268| Best HMM Match : SecA_PP_bind (HMM E-Value=0.33)
Length = 774
Score = 27.9 bits (59), Expect = 5.6
Identities = 25/94 (26%), Positives = 35/94 (37%)
Frame = -2
Query: 530 PIPEPVPTPSECVSWNPWRQSHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKL 351
P P P PTP +NPW S + + S S L P+ +K
Sbjct: 413 PAPPPPPTP----PFNPWLDSPKHSYAEVLKRGLSGKSQAQRHLKPMTLFPSKSPKDSKK 468
Query: 350 SGRKICPKGPERTESMVPGSKSTRMARGTYLPRR 249
S RK + R+ES + R G+ PR+
Sbjct: 469 SSRKSRNERRSRSESSPKKERDQREGNGS--PRK 500
>SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09)
Length = 166
Score = 27.5 bits (58), Expect = 7.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 459 GIV*LPPGIPTDTLARRRHRFRYGHP 536
G+V LPPG+ T H RYGHP
Sbjct: 7 GMVTLPPGMVTLPPGMVTHFTRYGHP 32
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -2
Query: 530 PIPEPVPTPSECVSWNPWRQSHDSASFRTTSKTEST 423
P P + TP E +SW+ W+ T+S +T
Sbjct: 3197 PSPSTLVTPGEALSWSAWKDPQFPRKRLTSSTLAAT 3232
>SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2195
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 127 AALTSLDMYDFPHFVLFM*TINYLTLKICSARSTTVVV 14
A++T+L YD+ H + TI T+ I +TTV+V
Sbjct: 1702 ASMTTLGYYDYHHTTTIITTIINATIIIIIIITTTVIV 1739
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/38 (26%), Positives = 15/38 (39%)
Frame = -2
Query: 524 PEPVPTPSECVSWNPWRQSHDSASFRTTSKTESTSSAP 411
PEP P + W+PW S ++T + P
Sbjct: 890 PEPCPIDGKFAEWSPWTPCSVSCGIGLKNRTRYCAQPP 927
>SB_12192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1339
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -2
Query: 389 QLLPAPDCPKTKLSGRKICPKGPERTESMVPGSKSTR 279
Q +PA KT LS R+ K E+T S PG+++TR
Sbjct: 50 QEVPANRLIKTPLSRRE-STKPTEKTGSQTPGNRNTR 85
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,659,118
Number of Sequences: 59808
Number of extensions: 380888
Number of successful extensions: 1229
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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