Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021206
         (733 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    46   0.001
UniRef50_A6L6Q7 Cluster: Putative uncharacterized protein; n=1; ...    35   1.8  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 20/23 (86%), Positives = 21/23 (91%)
 Frame = -3

Query: 575 FLLPRWVDELTAHLVLSGYQSPK 507
           FLL RWVDELTAHLVLSGY SP+
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSPR 176


>UniRef50_A6L6Q7 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides vulgatus ATCC 8482|Rep: Putative
           uncharacterized protein - Bacteroides vulgatus (strain
           ATCC 8482 / DSM 1447 / NCTC 11154)
          Length = 438

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 22/69 (31%), Positives = 32/69 (46%)
 Frame = +1

Query: 409 VPHFKANDMMNTETLELISQGTHLFRRIYVVDVLGLW*PLNTRWAVSSSTHLGNKNKTTL 588
           VP   + D  N E  ELI+ G +     Y+ D L  + P+ TRW   +S   GN     +
Sbjct: 72  VPRPTSEDWGNAE--ELIASGEYSSMDAYLSDWLA-FNPMETRWFYVTSRKYGNNRSIHV 128

Query: 589 NDHRCGHFI 615
            D +  HF+
Sbjct: 129 TDRKFTHFV 137


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,094,778
Number of Sequences: 1657284
Number of extensions: 10504065
Number of successful extensions: 20969
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20960
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)