Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021206
         (733 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104899-1|AAI04900.1|  825|Homo sapiens leucine-rich repeats an...    30   7.4  
BC104897-1|AAI04898.1|  825|Homo sapiens leucine-rich repeats an...    30   7.4  
AK057348-1|BAB71441.1|  825|Homo sapiens protein ( Homo sapiens ...    30   7.4  

>BC104899-1|AAI04900.1|  825|Homo sapiens leucine-rich repeats and
           guanylate kinase domain containing protein.
          Length = 825

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 101 ITSGLTFRTTNSKIYSSFKL*SDYYKSGF 187
           +TSGL + TT  +++ SF L  DY+K  F
Sbjct: 698 LTSGLHYYTTLEELWKSFDLCEDYFKPPF 726


>BC104897-1|AAI04898.1|  825|Homo sapiens leucine-rich repeats and
           guanylate kinase domain containing protein.
          Length = 825

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 101 ITSGLTFRTTNSKIYSSFKL*SDYYKSGF 187
           +TSGL + TT  +++ SF L  DY+K  F
Sbjct: 698 LTSGLHYYTTLEELWKSFDLCEDYFKPPF 726


>AK057348-1|BAB71441.1|  825|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32786 fis, clone TESTI2002256, weakly similar to
           GUANYLATE KINASE (EC 2.7.4.8). ).
          Length = 825

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 101 ITSGLTFRTTNSKIYSSFKL*SDYYKSGF 187
           +TSGL + TT  +++ SF L  DY+K  F
Sbjct: 698 LTSGLHYYTTLEELWKSFDLCEDYFKPPF 726


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,979,737
Number of Sequences: 237096
Number of extensions: 1562703
Number of successful extensions: 5941
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5941
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)