Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021205X
(625 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 166 3e-42
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 165 6e-42
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 145 4e-36
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 116 3e-27
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 83 3e-17
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 61 1e-10
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 46 6e-06
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 33 0.025
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.72
SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyc... 27 2.2
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 6.7
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 6.7
SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA syntheta... 25 8.9
SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 25 8.9
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 166 bits (403), Expect = 3e-42
Identities = 99/195 (50%), Positives = 121/195 (62%), Gaps = 5/195 (2%)
Frame = +1
Query: 55 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 234
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 235 TIFDAKRSSDVSXKMLLCNPT*XTGLSR--LSVMEANLRSR*HIRVK--TKPFSPRK-SV 399
TIFDAKR + K +P + + V+ + + + K TK F+P + S
Sbjct: 64 TIFDAKRL--IGRK--FDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISS 119
Query: 400 HGAYENXGNCRSLSRQNCAECSYHGSRVLQ*LSKTSPKDAGTISGLNVLRIINEPTAAAI 579
+ + + + + KDAG I+GLNVLRIINEPTAAAI
Sbjct: 120 MVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAI 179
Query: 580 AYGLDKKGTGERNVL 624
AYGLD+ GE NVL
Sbjct: 180 AYGLDRSNQGESNVL 194
Score = 77.0 bits (181), Expect = 2e-15
Identities = 34/54 (62%), Positives = 40/54 (74%)
Frame = +3
Query: 255 LIGRKXEDATVQSDMXHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSPWCLRK 416
LIGRK +D VQSDM HWPF+V+S GKP ++V YKGE KTF PEE+S L K
Sbjct: 71 LIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMK 124
Score = 65.3 bits (152), Expect = 7e-12
Identities = 32/44 (72%), Positives = 34/44 (77%)
Frame = +2
Query: 383 PRGSQSMVLTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 514
P SMVL KM ETAEAYLG V +AV+TVPAYFNDSQRQA K
Sbjct: 114 PEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATK 157
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 165 bits (400), Expect = 6e-42
Identities = 98/195 (50%), Positives = 122/195 (62%), Gaps = 5/195 (2%)
Frame = +1
Query: 55 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 234
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 235 TIFDAKRSSDVSXKMLLCNPT*XTGLSR--LSVMEANLRSR*HIRVK--TKPFSPRK-SV 399
TIFDAKR + + +P + + V+E + + + K TK F+P + S
Sbjct: 64 TIFDAKRL--IGRR--FNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISS 119
Query: 400 HGAYENXGNCRSLSRQNCAECSYHGSRVLQ*LSKTSPKDAGTISGLNVLRIINEPTAAAI 579
+ + + + + + KDAG I+GLNVLRIINEPTAAAI
Sbjct: 120 MVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAI 179
Query: 580 AYGLDKKGTGERNVL 624
AYGLD+ E NVL
Sbjct: 180 AYGLDRSNQHETNVL 194
Score = 72.1 bits (169), Expect = 6e-14
Identities = 32/54 (59%), Positives = 38/54 (70%)
Frame = +3
Query: 255 LIGRKXEDATVQSDMXHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSPWCLRK 416
LIGR+ D VQSDM HWPF+V+ GKP I+V +KGE KTF PEE+S L K
Sbjct: 71 LIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLK 124
Score = 62.1 bits (144), Expect = 6e-11
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = +2
Query: 383 PRGSQSMVLTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 514
P SMVL KM E+AEA+LG V +AV+TVPAYFNDSQRQA K
Sbjct: 114 PEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATK 157
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 145 bits (352), Expect = 4e-36
Identities = 88/194 (45%), Positives = 114/194 (58%), Gaps = 5/194 (2%)
Frame = +1
Query: 58 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 237
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 238 IFDAKRSSDVSXKMLLCNPT*XTGLSRLSVMEANLRSR*HIRV----KTKPFSPRK-SVH 402
IFD KR + K T + N ++R + V K K F+P + S
Sbjct: 98 IFDIKRL--IGRK--FDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 403 GAYENXGNCRSLSRQNCAECSYHGSRVLQ*LSKTSPKDAGTISGLNVLRIINEPTAAAIA 582
+ + + + + KDAGTI+GLNV+RI+NEPTAAAIA
Sbjct: 154 ILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIA 213
Query: 583 YGLDKKGTGERNVL 624
YGLDK T E++++
Sbjct: 214 YGLDKTDT-EKHIV 226
Score = 66.1 bits (154), Expect = 4e-12
Identities = 30/51 (58%), Positives = 39/51 (76%)
Frame = +2
Query: 362 G*RQNLFPRGSQSMVLTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 514
G ++ P +M+L+KM +TAEAYLGK V +AV+TVPAYFND+QRQA K
Sbjct: 140 GKKKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATK 190
Score = 50.8 bits (116), Expect = 2e-07
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = +3
Query: 225 PQQHNIRCQTLIGRKXEDATVQSDMXHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSPW 404
P+ + LIGRK ++ T+ D+ +PF +V+D +P ++V G+ K F PEE+S
Sbjct: 94 PENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAM 153
Query: 405 CLRK 416
L K
Sbjct: 154 ILSK 157
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 116 bits (279), Expect = 3e-27
Identities = 52/67 (77%), Positives = 59/67 (88%)
Frame = +1
Query: 55 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 234
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 235 TIFDAKR 255
T+FDAKR
Sbjct: 68 TVFDAKR 74
Score = 63.3 bits (147), Expect = 3e-11
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +1
Query: 499 KTSPKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 624
+ + KDAG I+GLNVLRIINEPTAAAIAYGLD K +NVL
Sbjct: 157 RAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVL 198
Score = 60.5 bits (140), Expect = 2e-10
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +3
Query: 225 PQQHNIRCQTLIGRKXEDATVQSDMXHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSPW 404
P+ + LIGR+ ED Q D+ HWPF+V+ + G P I+V Y GE K F +E+S
Sbjct: 65 PRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAM 124
Query: 405 CLRKXXKL 428
L K ++
Sbjct: 125 VLTKMKEI 132
Score = 55.2 bits (127), Expect = 7e-09
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +2
Query: 398 SMVLTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 514
+MVLTKM E +EA L K V+ AVITVPAYF+DSQR A K
Sbjct: 123 AMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATK 161
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 83.0 bits (196), Expect = 3e-17
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Frame = +1
Query: 46 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 222
K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 223 NPNNTIFDAKR 255
NP NT F KR
Sbjct: 109 NPENTFFATKR 119
Score = 62.9 bits (146), Expect = 4e-11
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +2
Query: 404 VLTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQAQK 514
+L+KM ETA YLGK V+NAV+TVPAYFNDSQRQA K
Sbjct: 167 ILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATK 203
Score = 55.6 bits (128), Expect = 5e-09
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +1
Query: 499 KTSPKDAGTISGLNVLRIINEPTAAAIAYGLDKK 600
+ + K AG I+GLNVLR++NEPTAAA+AYGLDKK
Sbjct: 199 RQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK 232
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 61.3 bits (142), Expect = 1e-10
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 11/196 (5%)
Frame = +1
Query: 43 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 222
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 223 NPNNTI----------FDAKRSSDVSXKMLLCNPT*XTGLSRLSVMEANLRSR*-HIRVK 369
N NT+ +D D+ + T G V N + +I++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 370 TKPFSPRKSVHGAYENXGNCRSLSRQNCAECSYHGSRVLQ*LSKTSPKDAGTISGLNVLR 549
F+ K++ A E G+ + A + R L +A I+GLN LR
Sbjct: 123 AAYFTKIKAIAEA-ELIGSVSDVVISIPAWFTDIQRRALL--------EAANIAGLNPLR 173
Query: 550 IINEPTAAAIAYGLDK 597
++N+ AAA+ YG+ K
Sbjct: 174 LMNDNAAAALTYGITK 189
Score = 33.5 bits (73), Expect = 0.025
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 410 TKMXETAEAYLGKTVQNAVITVPAYFNDSQRQA 508
TK+ AEA L +V + VI++PA+F D QR+A
Sbjct: 127 TKIKAIAEAELIGSVSDVVISIPAWFTDIQRRA 159
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 45.6 bits (103), Expect = 6e-06
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +1
Query: 58 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 237
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 238 I 240
+
Sbjct: 87 V 87
Score = 38.7 bits (86), Expect = 7e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 407 LTKMXETAEAYLGKTVQNAVITVPAYFNDSQRQA 508
L ++ E+AE +LG V V++VP YF D+QR+A
Sbjct: 148 LRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKA 181
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 33.5 bits (73), Expect = 0.025
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 58 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 234
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 235 TIFDAKRSSDVS 270
+I + K D +
Sbjct: 85 SIRNVKELLDTA 96
Score = 25.8 bits (54), Expect = 5.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 398 SMVLTKMXETAEAYLGKTVQNAVITVPAYFNDSQR 502
+M + AE + + + V+TVP +FN+ QR
Sbjct: 142 AMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQR 176
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.72
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 50 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 145
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPBC13A2.04c |||PTR family peptide transporter|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 618
Score = 27.1 bits (57), Expect = 2.2
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -1
Query: 400 GLTSSGKKVLSSPLYATLILGLPPSLTTSK-GQXIMSDCTVASSXLRPMSVW 248
GL + G K SPL A + +PP + T K G ++ D V +S + W
Sbjct: 201 GLGTGGIKSNVSPLMAEQLPKIPPYVKTKKNGSKVIVDPVVTTSRAYMIFYW 252
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 6.7
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +3
Query: 36 QNGKSTRSRNRSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCRQEPG 215
+NGK T +R +S + W P++E R G D + V R + + +EP
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE----RSSNGNSDSASPPPVPRLSITRSQVSREP- 531
Query: 216 GDEPQQ 233
++P++
Sbjct: 532 -EKPEE 536
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 6.7
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -1
Query: 136 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 32
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
>SPAC30C2.04 |||cofactor for methionyl-and glutamyl-tRNA synthetases
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 25.0 bits (52), Expect = 8.9
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 196 DAAKNQVAMNPNNTIFDAKRSSDVSXKMLLCNPT*XTGLSRLSV 327
D + + +NP I++A + S + L+C +GL RL V
Sbjct: 387 DTEEPEAQLNPKRKIWEAIQPGFTSGEDLICGYKDESGLHRLFV 430
>SPAC1527.03 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 475
Score = 25.0 bits (52), Expect = 8.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +3
Query: 360 KGEDKTFFPEEVSPWCLRKXXKLPK 434
K + + + P V+ W LRK +PK
Sbjct: 67 KSKSEDYQPSNVNVWALRKEKMIPK 91
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,686,519
Number of Sequences: 5004
Number of extensions: 55544
Number of successful extensions: 182
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 275671126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -