Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021204
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    32   0.005
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.2  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   3.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.5  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   7.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.5  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   9.9  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 31.9 bits (69), Expect = 0.005
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +3

Query: 303 IVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLT 401
           +VTDW + E+I+ Y  +K +LS F    PV+LT
Sbjct: 158 VVTDWVNFERIY-YKLTKKKLSVFFGNKPVILT 189


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 5/16 (31%), Positives = 14/16 (87%)
 Frame = -2

Query: 100 LIHYNITQLHFNYYFI 53
           L++YN++++  N+Y++
Sbjct: 53  LVNYNVSEISENFYYL 68


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 447 IFFETFNVPALFLSMQAVLSFMQQVV 524
           IFF  FNV   +L+ + VL    + V
Sbjct: 171 IFFTVFNVAQCYLTTELVLMLQTRFV 196


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = -2

Query: 193 TTNIVRETTFRYLITSEARLYYAGAVVYYDGLIHYNITQLHFN 65
           T  I  E   R L  SE         V  D + H NIT +H N
Sbjct: 442 TPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAIHTN 484


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +3

Query: 405 APLNPRRNREKSAEIFFETFNVPAL 479
           A    R    KSA  FFET+N   L
Sbjct: 114 ADATKRATMAKSALEFFETYNFDGL 138


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 447 IFFETFNVPALFLSMQAVLSFMQQVV 524
           +FF  FNV   +L+ + VL    + V
Sbjct: 528 VFFTVFNVVHCYLASELVLMLKNRFV 553


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 564 CVTPSPESSTAPVVRPVA*N*ERPALKEI 478
           C TP+  S T P  +    N +RP   E+
Sbjct: 434 CSTPTENSPTKPYYKLKTANNKRPPSTEL 462


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,936
Number of Sequences: 336
Number of extensions: 3787
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)