Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021204
(710 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 142 3e-35
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 141 1e-34
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 96 4e-21
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 77 3e-15
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 54 2e-08
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 54 2e-08
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 47 3e-06
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 39 8e-04
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 38 0.001
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 33 0.053
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.070
SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 28 1.5
SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 6.1
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 26 6.1
SPBC428.13c |mob1||protein kinase regulator Mob1|Schizosaccharom... 26 6.1
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 142 bits (345), Expect = 3e-35
Identities = 83/209 (39%), Positives = 114/209 (54%), Gaps = 7/209 (3%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKSIA----- 268
+VIDNGSG+ KAGFAGD P+ FP+ +GRP+H +M G + + +VG +S
Sbjct: 8 LVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 269 --PSQHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVR 442
P +H I N + ++ H EL + P + P + + P K+
Sbjct: 68 KYPIEHGIVNNWDDMEKIWHHTFYNELRV--APEEH-----PCLLTEAPLNPKSNREKMT 120
Query: 443 RNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 622
+ I YA+GRTTG VLDSGDGVTH VPIYEG+A+PH+IMR+D+
Sbjct: 121 QIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDL 180
Query: 623 AGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
AGRD+T YL +L + G T+AE EIV
Sbjct: 181 AGRDLTDYLMKILMERGYTFSTTAEREIV 209
Score = 107 bits (256), Expect = 2e-24
Identities = 46/76 (60%), Positives = 61/76 (80%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYP+EHGIV +W+DMEKIW++ + ++L EEHP LLTEAPLNP+ NREK +I FE
Sbjct: 67 LKYPIEHGIVNNWDDMEKIWHHTFY-NELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFE 125
Query: 459 TFNVPALFLSMQAVLS 506
TFN PA ++++QAVLS
Sbjct: 126 TFNAPAFYVAIQAVLS 141
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 141 bits (341), Expect = 1e-34
Identities = 81/217 (37%), Positives = 120/217 (55%), Gaps = 4/217 (1%)
Frame = +2
Query: 71 MELSDVIVNQPVVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGP 250
M ++++ NQP+ IDNGSG IKAGFAGD IPKC FP +GR KH RVM +++ ++FVG
Sbjct: 1 MTVTEIFDNQPICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGS 60
Query: 251 REKSIA---PSQHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFL-RRTPSAVDRSTSEP 418
+++ Q I G ++ +++ Y+ + L P +
Sbjct: 61 EAQNLRGLLKIQRPIERGIIQNWS---DMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLAN 117
Query: 419 SQE*RKVRRNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMP 598
+ K+ + + YA+ RTTG VL+ GDG+TH+VPIY+GF++P
Sbjct: 118 IRNKEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIP 177
Query: 599 HSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
+I + ++ GRDVT YL+L LRK G L +SAE EIV
Sbjct: 178 SAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIV 214
Score = 103 bits (246), Expect = 3e-23
Identities = 46/76 (60%), Positives = 59/76 (77%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
I+ P+E GI+ +W+DME+IW+YIYS QL+T EEHP+LLTE PL RN+EK AE F+E
Sbjct: 71 IQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYE 130
Query: 459 TFNVPALFLSMQAVLS 506
T NVPAL S+Q VL+
Sbjct: 131 TLNVPALSFSLQPVLA 146
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 96.3 bits (229), Expect = 4e-21
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 7/210 (3%)
Frame = +2
Query: 101 PVVIDNGSGVIKAGFAGDQIPKCRFPNYIGRP-KHTRVMAGALE-GEIFVGPRE---KSI 265
P+V+DNG+G +K G+A D P+ +FP+ +GRP G ++ ++ VG +S+
Sbjct: 5 PIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSL 64
Query: 266 APSQHQIPNGTRNSYRLERHGKDLELY--LQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKV 439
++ + NG + D + L+ P R + P K+
Sbjct: 65 LQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDP-----RGRKILLTEPPMNPVANREKM 119
Query: 440 RRNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVD 619
+ G+ YA G ++G V+DSGDGVTH VP+YE + H + R+D
Sbjct: 120 CETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVLNHLVGRLD 179
Query: 620 VAGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
VAGRD T+YL LL ++G +A+ E V
Sbjct: 180 VAGRDATRYLISLLLRKGYAFNRTADFETV 209
Score = 73.3 bits (172), Expect = 3e-14
Identities = 32/80 (40%), Positives = 51/80 (63%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYPME+GI+ D+ +M ++W+Y + ++L +LLTE P+NP NREK E FE
Sbjct: 67 VKYPMENGIIRDFEEMNQLWDYTFF-EKLKIDPRGRKILLTEPPMNPVANREKMCETMFE 125
Query: 459 TFNVPALFLSMQAVLSFMQQ 518
+ +++++QAVLS Q
Sbjct: 126 RYGFGGVYVAIQAVLSLYAQ 145
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 76.6 bits (180), Expect = 3e-15
Identities = 35/76 (46%), Positives = 49/76 (64%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+ YP+ HG + +W+ ME+ W K L E+H LLTE PLNP NRE +AEI FE
Sbjct: 90 LDYPIRHGQIENWDHMERFWQQSLFK-YLRCEPEDHYFLLTEPPLNPPENRENTAEIMFE 148
Query: 459 TFNVPALFLSMQAVLS 506
+FN L++++QAVL+
Sbjct: 149 SFNCAGLYIAVQAVLA 164
Score = 58.8 bits (136), Expect = 7e-10
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = +2
Query: 461 IQCTGIISFNAGRSQFYATGRT-TGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDV 637
I +++ A + T R+ TG V+DSGDGVTH +P+ EG+ + SI + +AGRDV
Sbjct: 157 IAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDV 216
Query: 638 TKYLRLLLR 664
T +++ LLR
Sbjct: 217 TYFVQSLLR 225
Score = 36.7 bits (81), Expect = 0.003
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 95 NQPVVIDNGSGVIKAGFAGDQIPKCRFPNYI 187
N P+++DNG+G K G+AG+ P FP I
Sbjct: 5 NVPIIMDNGTGYSKLGYAGNDAPSYVFPTVI 35
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 54.0 bits (124), Expect = 2e-08
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +3
Query: 288 PMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFN 467
P E ++++W+ ME++ +Y + K L EHP+ +TE NP R E+ FE +N
Sbjct: 86 PFERNVISNWDLMEQVLDYTFLK--LGIDRMEHPICMTEPLANPTYVRSTMTELLFELYN 143
Query: 468 VPALFLSMQAVLSFMQQVVP 527
P++ + + SF P
Sbjct: 144 APSVAYGIDGLFSFYHNTKP 163
Score = 42.7 bits (96), Expect = 5e-05
Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 5/193 (2%)
Frame = +2
Query: 101 PVVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRV-MAGALEG-EIFVGPREKSIAPS 274
P+VIDNGS ++AG+ G++ PK F N + R + ++ L G + + +SIA S
Sbjct: 26 PLVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRKLSRTSTLVGNDTLIEVGSRSIARS 85
Query: 275 QHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVRRNIL 454
+ +++ L D +L+ G P + + P+ R +L
Sbjct: 86 PFE--RNVISNWDLMEQVLDY-TFLKLG---IDRMEHPICMTEPLANPTYV-RSTMTELL 138
Query: 455 *DIQCTGIISFNA-GRSQFYATGR--TTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVA 625
++ +++ G FY + ++G VL+ G+ +H +P+ G + R+
Sbjct: 139 FELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAKRISWG 198
Query: 626 GRDVTKYLRLLLR 664
G + YL L +
Sbjct: 199 GSQSSSYLLKLFQ 211
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 54.0 bits (124), Expect = 2e-08
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
IK + +G V +W+ +W Y + QL T EHP+L+TE NP NR K+ E FE
Sbjct: 65 IKNAIRNGWVENWDVTVDLWRYGLEQ-QLKTNPLEHPILITEPFDNPPENRVKTLETMFE 123
Query: 459 TFNVPALFLSMQ 494
+ PA +L+ Q
Sbjct: 124 SLRCPATYLAKQ 135
Score = 44.8 bits (101), Expect = 1e-05
Identities = 46/191 (24%), Positives = 76/191 (39%), Gaps = 4/191 (2%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKSIAPSQHQ 283
+VID GS + GF+G+ IPKC P+Y G R L GE ++ + ++
Sbjct: 14 IVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGR----RLFGEEYIYKSNPGM-EIKNA 68
Query: 284 IPNGTRNSY----RLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVRRNI 451
I NG ++ L R+G LE L+ P + P + P + K +
Sbjct: 69 IRNGWVENWDVTVDLWRYG--LEQQLKTNPLEH-----PILITEPFDNPPENRVKTLETM 121
Query: 452 L*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGR 631
++C +A+G+ T ++D G + IY+GF + +G
Sbjct: 122 FESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGN 181
Query: 632 DVTKYLRLLLR 664
+ L LR
Sbjct: 182 AINDILAQTLR 192
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 46.8 bits (106), Expect = 3e-06
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+K +GI+ DW W K++L E+ +++TE NP+ R++ E FE
Sbjct: 68 VKNGKSNGIIQDWESTLYTWERGL-KEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFE 126
Query: 459 TFNVPALFLSMQAV 500
+VPA +L+ QAV
Sbjct: 127 QLHVPAFYLTKQAV 140
Score = 29.1 bits (62), Expect = 0.66
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 8/183 (4%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIG-RPKHT---RVMAGALEGEIFVGPREKSIAP 271
+VID GS + G+AG++ P P+Y G R T + + L+ + E
Sbjct: 13 LVIDPGSCWTRFGYAGEESPMTILPSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGK 72
Query: 272 SQHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVRRNI 451
S I + Y ER L+ LQ P Y + T EPS + VR+ I
Sbjct: 73 SNGIIQDWESTLYTWER---GLKEKLQVNPTEYAMMIT---------EPSWNPQSVRQQI 120
Query: 452 L-*DIQCTGIISFNAGRSQF---YATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVD 619
+ + + +F + +A ++T ++D G P+ +G + I +
Sbjct: 121 MEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQS 180
Query: 620 VAG 628
+AG
Sbjct: 181 LAG 183
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 38.7 bits (86), Expect = 8e-04
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +3
Query: 288 PMEHGIVTDWNDMEKIWNYIYS---KDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
P++ G V DW ++ W ++YS KD T + +PV L +RE + + FFE
Sbjct: 113 PIQRGRVVDWEALKAFWKHLYSLLLKDPNDT-TFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 459 TFNVPALFLSMQAVL 503
VP ++ + ++
Sbjct: 172 ECQVPGFTIAYEPLM 186
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 38.3 bits (85), Expect = 0.001
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +2
Query: 536 VLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 682
V+DSG TH +P+ + ++ RVDV G+ +T YL+ ++ N+
Sbjct: 160 VIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM 208
Score = 30.7 bits (66), Expect = 0.21
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPK 199
+V+DNG+ IKAGFAG ++ PN + R K
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSK 37
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 32.7 bits (71), Expect = 0.053
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 509 YATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVT-KYLRLLLR 664
+ G + V+D G T + EG +P+S ++++ G D+T +++LL+R
Sbjct: 286 FGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRIKINYGGDDITLLFMKLLMR 338
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 32.3 bits (70), Expect = 0.070
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 363 LSTFSEEHPVLLTE--APLNPRRNREKSAEIFFETFNVPALFLSMQAVLSFMQQVV 524
L+ + E+HP+LLT+ A L PR + + IF ++ N P + M A+ Q V
Sbjct: 1403 LNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQHLNIQAV 1458
>SPBC18E5.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 615
Score = 27.9 bits (59), Expect = 1.5
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Frame = +2
Query: 176 PNYIGRP-KHTRVMAG---ALEGEIFVGPREKSIAPSQHQIPNGTRN 304
P + RP K T AG ALE + GP +S P++ + P+GT++
Sbjct: 470 PRFSVRPNKFTGSRAGFVAALESRLQKGPLMRSFVPNKSKSPSGTKS 516
>SPAC323.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 575
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -2
Query: 214 HHSCVLRTTNIVRETTFRYLITSEARLYYAGAVVYY 107
H C+ T + + + ++ S RLYY + YY
Sbjct: 447 HARCLFLLTKTLNLDSLKSILCSRVRLYYNIEIAYY 482
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 590 RTPRIWGRRASLHRRSPVQHP 528
R PR W +R + + SP QHP
Sbjct: 197 RMPRFWLKRRTNVKSSPSQHP 217
>SPBC428.13c |mob1||protein kinase regulator
Mob1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 25.8 bits (54), Expect = 6.1
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +1
Query: 451 SLRHSMYRHYFFQCRPFSVLCNRSY 525
S ++ ++H+ F CR F ++ N+ Y
Sbjct: 175 SYLNTSFKHFVFFCREFGLMDNKEY 199
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,012,195
Number of Sequences: 5004
Number of extensions: 64925
Number of successful extensions: 203
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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