Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021204
(710 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 182 2e-46
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 138 4e-33
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 138 4e-33
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 138 4e-33
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 138 4e-33
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 138 4e-33
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 138 4e-33
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 138 5e-33
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 137 8e-33
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 135 3e-32
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 122 2e-28
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 111 4e-25
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 85 6e-17
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 65 5e-11
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 62 3e-10
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 62 3e-10
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 62 3e-10
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 62 3e-10
Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical p... 32 0.47
Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical pr... 32 0.47
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 29 3.3
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 29 3.3
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 28 7.6
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 182 bits (444), Expect = 2e-46
Identities = 106/219 (48%), Positives = 140/219 (63%), Gaps = 10/219 (4%)
Frame = +2
Query: 83 DVIVNQPVVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKS 262
DVI NQPVVIDNGSGVIKAGFAG+Q PK RF N++GRPK+ RVMAG L+G+IF+GP+ +S
Sbjct: 4 DVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAES 63
Query: 263 IA-------PSQHQIPNGTRNSYRLERH--GKD-LELYLQ*GPAIYFLRRTPSAVDRSTS 412
P +H I N + ++ + G+D L+++ + P + L P ++
Sbjct: 64 NRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVL--LTDAPLNPLKNRE 121
Query: 413 EPSQE*RKVRRNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFA 592
++ + IQ ++S YATGRTTG VLDSGDGVTHAVPI +GFA
Sbjct: 122 RSAEIFFETFNVPALYIQMQAVLSL-------YATGRTTGVVLDSGDGVTHAVPIVKGFA 174
Query: 593 MPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
M H+I R+D+AGRDVT+YLR+LLR+EG S E EIV
Sbjct: 175 MKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIV 213
Score = 134 bits (325), Expect = 4e-32
Identities = 58/76 (76%), Positives = 68/76 (89%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
I+YPMEHGIV +W+DMEKIW YI+ +DQL F EEHPVLLT+APLNP +NRE+SAEIFFE
Sbjct: 70 IEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFE 129
Query: 459 TFNVPALFLSMQAVLS 506
TFNVPAL++ MQAVLS
Sbjct: 130 TFNVPALYIQMQAVLS 145
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 640 GDVTPGHVDSHDAVRHREPLVYGDGVRHSIAGVQYSTRGTT 518
G T +DS D V H P+V G ++H+I + + R T
Sbjct: 150 GRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVT 190
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 138 bits (334), Expect = 4e-33
Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKSIA----- 268
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 269 --PSQHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVR 442
P +H I + ++ H EL + P + P + + P K+
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRV--APEEH-----PVLLTEAPLNPKANREKMT 121
Query: 443 RNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 622
+ + + YA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 623 AGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
AGRD+T YL +L + G + T+AE EIV
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIV 210
Score = 111 bits (268), Expect = 4e-25
Identities = 48/76 (63%), Positives = 64/76 (84%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FE
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 459 TFNVPALFLSMQAVLS 506
TFN PA+++++QAVLS
Sbjct: 127 TFNTPAMYVAIQAVLS 142
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 138 bits (334), Expect = 4e-33
Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKSIA----- 268
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 269 --PSQHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVR 442
P +H I + ++ H EL + P + P + + P K+
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRV--APEEH-----PVLLTEAPLNPKANREKMT 121
Query: 443 RNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 622
+ + + YA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 623 AGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
AGRD+T YL +L + G + T+AE EIV
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIV 210
Score = 111 bits (268), Expect = 4e-25
Identities = 48/76 (63%), Positives = 64/76 (84%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FE
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 459 TFNVPALFLSMQAVLS 506
TFN PA+++++QAVLS
Sbjct: 127 TFNTPAMYVAIQAVLS 142
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 138 bits (334), Expect = 4e-33
Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKSIA----- 268
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 269 --PSQHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVR 442
P +H I + ++ H EL + P + P + + P K+
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRV--APEEH-----PVLLTEAPLNPKANREKMT 121
Query: 443 RNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 622
+ + + YA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 623 AGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
AGRD+T YL +L + G + T+AE EIV
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIV 210
Score = 111 bits (268), Expect = 4e-25
Identities = 48/76 (63%), Positives = 64/76 (84%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FE
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 459 TFNVPALFLSMQAVLS 506
TFN PA+++++QAVLS
Sbjct: 127 TFNTPAMYVAIQAVLS 142
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 138 bits (334), Expect = 4e-33
Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKSIA----- 268
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 269 --PSQHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVR 442
P +H I + ++ H EL + P + P + + P K+
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRV--APEEH-----PVLLTEAPLNPKANREKMT 121
Query: 443 RNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 622
+ + + YA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 623 AGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
AGRD+T YL +L + G + T+AE EIV
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIV 210
Score = 111 bits (268), Expect = 4e-25
Identities = 48/76 (63%), Positives = 64/76 (84%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FE
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 459 TFNVPALFLSMQAVLS 506
TFN PA+++++QAVLS
Sbjct: 127 TFNTPAMYVAIQAVLS 142
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 138 bits (334), Expect = 4e-33
Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKSIA----- 268
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 269 --PSQHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVR 442
P +H I + ++ H EL + P + P + + P K+
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRV--APEEH-----PVLLTEAPLNPKANREKMT 121
Query: 443 RNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 622
+ + + YA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 623 AGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
AGRD+T YL +L + G + T+AE EIV
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIV 210
Score = 111 bits (268), Expect = 4e-25
Identities = 48/76 (63%), Positives = 64/76 (84%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FE
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 459 TFNVPALFLSMQAVLS 506
TFN PA+++++QAVLS
Sbjct: 127 TFNTPAMYVAIQAVLS 142
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 138 bits (334), Expect = 4e-33
Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKSIA----- 268
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 269 --PSQHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVR 442
P +H I + ++ H EL + P + P + + P K+
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRV--APEEH-----PVLLTEAPLNPKANREKMT 121
Query: 443 RNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 622
+ + + YA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 623 AGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
AGRD+T YL +L + G + T+AE EIV
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIV 210
Score = 111 bits (268), Expect = 4e-25
Identities = 48/76 (63%), Positives = 64/76 (84%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FE
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 459 TFNVPALFLSMQAVLS 506
TFN PA+++++QAVLS
Sbjct: 127 TFNTPAMYVAIQAVLS 142
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 138 bits (333), Expect = 5e-33
Identities = 80/209 (38%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKSIA----- 268
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 269 --PSQHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVR 442
P +H I + ++ H EL + P + P + + P K+
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRV--APEEH-----PVLLTEAPLNPKANREKMT 121
Query: 443 RNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 622
+ + + YA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 623 AGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
AGRD+T YL +L + G + T+AE EIV
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIV 210
Score = 111 bits (268), Expect = 4e-25
Identities = 48/76 (63%), Positives = 64/76 (84%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FE
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 459 TFNVPALFLSMQAVLS 506
TFN PA+++++QAVLS
Sbjct: 127 TFNTPAMYVAIQAVLS 142
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 137 bits (331), Expect = 8e-33
Identities = 79/209 (37%), Positives = 115/209 (55%), Gaps = 7/209 (3%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKSIA----- 268
+++DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
Query: 269 --PSQHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVR 442
P +H I + ++ H EL + P + P + + P K+
Sbjct: 69 KYPIEHGIVTNWDDMEKIWHHTFYNELRV--APEEH-----PVLLTEAPLNPKANREKMT 121
Query: 443 RNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 622
+ + + YA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+
Sbjct: 122 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 181
Query: 623 AGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
AGRD+T YL +L + G + T+AE EIV
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIV 210
Score = 111 bits (268), Expect = 4e-25
Identities = 48/76 (63%), Positives = 64/76 (84%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FE
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 126
Query: 459 TFNVPALFLSMQAVLS 506
TFN PA+++++QAVLS
Sbjct: 127 TFNTPAMYVAIQAVLS 142
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 135 bits (326), Expect = 3e-32
Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 7/209 (3%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKSIA----- 268
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 8 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 67
Query: 269 --PSQHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVR 442
P +H I + ++ H EL + P + P + + P K+
Sbjct: 68 KYPIEHGIVTNWDDMEKIWHHTFYNELRI--APEEH-----PVLLTEAPLNPKSNREKMT 120
Query: 443 RNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 622
+ + + YA+GRTTG VLD+GDGVTH VPIYEG+A+PH+I R+D+
Sbjct: 121 QIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDL 180
Query: 623 AGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
AGRD+T Y+ +L + G T+AE EIV
Sbjct: 181 AGRDLTDYMMKILTERGYTFTTTAEREIV 209
Score = 111 bits (267), Expect = 5e-25
Identities = 48/76 (63%), Positives = 64/76 (84%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FE
Sbjct: 67 LKYPIEHGIVTNWDDMEKIWHHTFY-NELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFE 125
Query: 459 TFNVPALFLSMQAVLS 506
TFN PA+++++QAVLS
Sbjct: 126 TFNTPAMYVNIQAVLS 141
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 122 bits (295), Expect = 2e-28
Identities = 73/199 (36%), Positives = 106/199 (53%), Gaps = 7/199 (3%)
Frame = +2
Query: 134 KAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKSIA-------PSQHQIPN 292
+AGFAGD P+ FP+ +GRP+H VM G + + +VG +S P +H I
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 293 GTRNSYRLERHGKDLELYLQ*GPAIYFLRRTPSAVDRSTSEPSQE*RKVRRNIL*DIQCT 472
+ ++ H EL + P + P + + P K+ + +
Sbjct: 65 NWDDMEKIWHHTFYNELRV--APEEH-----PVLLTEAPLNPKANREKMTQIMFETFNTP 117
Query: 473 GIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLR 652
+ YA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T YL
Sbjct: 118 AMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLM 177
Query: 653 LLLRKEGVNLRTSAELEIV 709
+L + G + T+AE EIV
Sbjct: 178 KILTERGYSFTTTAEREIV 196
Score = 111 bits (268), Expect = 4e-25
Identities = 48/76 (63%), Positives = 64/76 (84%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FE
Sbjct: 54 LKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 112
Query: 459 TFNVPALFLSMQAVLS 506
TFN PA+++++QAVLS
Sbjct: 113 TFNTPAMYVAIQAVLS 128
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 111 bits (268), Expect = 4e-25
Identities = 48/76 (63%), Positives = 64/76 (84%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYP+EHGIVT+W+DMEKIW++ + ++L EEHPVLLTEAPLNP+ NREK +I FE
Sbjct: 24 LKYPIEHGIVTNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 82
Query: 459 TFNVPALFLSMQAVLS 506
TFN PA+++++QAVLS
Sbjct: 83 TFNTPAMYVAIQAVLS 98
Score = 100 bits (240), Expect = 9e-22
Identities = 44/67 (65%), Positives = 56/67 (83%)
Frame = +2
Query: 509 YATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNLRT 688
YA+GRTTG VLDSGDGVTH VPIYEG+A+PH+I+R+D+AGRD+T YL +L + G + T
Sbjct: 100 YASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 159
Query: 689 SAELEIV 709
+AE EIV
Sbjct: 160 TAEREIV 166
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 99 bits (238), Expect = 2e-21
Identities = 66/209 (31%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRP--KHTRVMAGALEGEIFVGP---REKSIA 268
+V+DNG+G +K G+AG P FP+ +GRP + T+ + ++ VG + + +
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 269 PSQHQIPNGTRNSYRLERHGKDLELYLQ*GPAIYFL--RRTPSAVDRSTSEPSQE*RKVR 442
+ + NG ++ H D GP + + + P+ K+
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTF----GPEKLDIDPKECKLLLTEPPLNPNSNREKMF 124
Query: 443 RNIL*DIQCTGIISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEGFAMPHSIMRVDV 622
+ + I YA G TG V+DSGDGVTH P+YEGFA+ H R+D+
Sbjct: 125 QVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDI 184
Query: 623 AGRDVTKYLRLLLRKEGVNLRTSAELEIV 709
AGRD+TKYL LL + G N SA+ E V
Sbjct: 185 AGRDITKYLIKLLLQRGYNFNHSADFETV 213
Score = 80.2 bits (189), Expect = 1e-15
Identities = 38/110 (34%), Positives = 61/110 (55%)
Frame = +3
Query: 189 VVRSTQE*WQER*KXXXXXXXXXXXXXXXXIKYPMEHGIVTDWNDMEKIWNYIYSKDQLS 368
+VRSTQ K I YPM++GIV +W+DM +W++ + ++L
Sbjct: 40 IVRSTQRVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLD 99
Query: 369 TFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAVLSFMQQ 518
+E +LLTE PLNP NREK ++ FE + ++++++QAVL+ Q
Sbjct: 100 IDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQ 149
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 84.6 bits (200), Expect = 6e-17
Identities = 40/76 (52%), Positives = 52/76 (68%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFE 458
+KYP+ HGIV DW+ ME+ W K L E+H LLTE PLN NRE +AEI FE
Sbjct: 81 VKYPIRHGIVEDWDLMERYWEQCIFK-YLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 459 TFNVPALFLSMQAVLS 506
+FNVP L++++QAVL+
Sbjct: 140 SFNVPGLYIAVQAVLA 155
Score = 66.9 bits (156), Expect = 1e-11
Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 21/207 (10%)
Frame = +2
Query: 107 VIDNGSGVIKAGFAGDQIPKCRFPNYIG-RPK-----------HTRVMAGALEGEIFVGP 250
VIDNG+G K G+AG+ P+ P+ I + K + RV AG + + F+G
Sbjct: 10 VIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDFFIGD 69
Query: 251 REKSIAPSQHQIPNGTRNSY-----RLERHGKD-LELYLQ*GPAIYFLRRT-PSAVDRST 409
S A + + + R+ +ER+ + + YL+ P +F T P
Sbjct: 70 EALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPEN 129
Query: 410 SEPSQE*RKVRRNIL*-DIQCTGIISFNAGRSQFYATGRT-TGAVLDSGDGVTHAVPIYE 583
E + E N+ I +++ A + A R+ TG V+DSGDGVTH +P+ +
Sbjct: 130 REYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVAD 189
Query: 584 GFAMPHSIMRVDVAGRDVTKYLRLLLR 664
G+ + I + +AGRD+T +++ LLR
Sbjct: 190 GYVIGSCIKHIPIAGRDITYFIQSLLR 216
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 64.9 bits (151), Expect = 5e-11
Identities = 35/76 (46%), Positives = 42/76 (55%)
Frame = +3
Query: 291 MEHGIVTDWNDMEKIWNYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNV 470
M+ G++ DW EKI + Y S SE HPVL +E+ N R REK EI FE F V
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSE-HPVLFSESSWNDRARREKLTEIMFEKFQV 152
Query: 471 PALFLSMQAVLSFMQQ 518
PA +LS VLS Q
Sbjct: 153 PAYYLSKNVVLSCFAQ 168
Score = 56.8 bits (131), Expect = 1e-08
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIG----RPKHTRVMAGALE---GEIFVGPREKS 262
+V D GS + GFAG++ PK P+YI P T A+E REK+
Sbjct: 14 LVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQTKREKN 73
Query: 263 --IAPSQHQIPNGTRNSYRLERHG--KDLELYLQ*GPAIY--FLRRTPSAVDRSTSEPSQ 424
I ++ +P N + G +D EL+ + Y L PS SE S
Sbjct: 74 FFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSW 133
Query: 425 E*RKVRRNIL*DIQCTGI------ISFNAGRSQFYATGRTTGAVLDSGDGVTHAVPIYEG 586
R RR L +I +S N S F A GRT G ++DSG T VP+++G
Sbjct: 134 NDR-ARREKLTEIMFEKFQVPAYYLSKNVVLSCF-AQGRTHGLMVDSGATQTSVVPVFDG 191
Query: 587 FAMPHSIMRVDVAGRDVTKYLRLLLRKEGVNL 682
+A+ H++++ + G +T+ L +L ++ +++
Sbjct: 192 YAVTHAVVKCPIGGDLITEQLAQMLDQQKIDV 223
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKS 262
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKI 335
+KYP+EHGIVT+W+DMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKS 262
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKI 335
+KYP+EHGIVT+W+DMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKS 262
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
Score = 35.5 bits (78), Expect = 0.038
Identities = 12/16 (75%), Positives = 16/16 (100%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDM 326
+KYP+EHGIVT+W+DM
Sbjct: 68 LKYPIEHGIVTNWDDM 83
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +2
Query: 104 VVIDNGSGVIKAGFAGDQIPKCRFPNYIGRPKHTRVMAGALEGEIFVGPREKS 262
+V+DNGSG+ KAGFAGD P+ FP+ +GRP+H VM G + + +VG +S
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/19 (78%), Positives = 19/19 (100%)
Frame = +3
Query: 279 IKYPMEHGIVTDWNDMEKI 335
+KYP+EHGIVT+W+DMEKI
Sbjct: 68 LKYPIEHGIVTNWDDMEKI 86
>Z68221-6|CAB97237.1| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 31.9 bits (69), Expect = 0.47
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 312 DWNDMEKIWNYIYSKDQLSTFSEE 383
D D+++ W+Y+Y KD + FS+E
Sbjct: 315 DIADVDRFWDYLYEKDDIQKFSDE 338
>Z68217-12|CAA92468.2| 583|Caenorhabditis elegans Hypothetical
protein F58G6.6 protein.
Length = 583
Score = 31.9 bits (69), Expect = 0.47
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 312 DWNDMEKIWNYIYSKDQLSTFSEE 383
D D+++ W+Y+Y KD + FS+E
Sbjct: 315 DIADVDRFWDYLYEKDDIQKFSDE 338
>Z49074-2|CAE48829.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 339 NYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAV 500
NY+ SK+ L T E+ P+LL AP N+E + E+ + P + ++Q V
Sbjct: 272 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 323
>Z49074-1|CAA88893.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 339 NYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAV 500
NY+ SK+ L T E+ P+LL AP N+E + E+ + P + ++Q V
Sbjct: 236 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 287
>Z49073-9|CAE48845.1| 807|Caenorhabditis elegans Hypothetical
protein ZK970.1b protein.
Length = 807
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 339 NYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAV 500
NY+ SK+ L T E+ P+LL AP N+E + E+ + P + ++Q V
Sbjct: 272 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 323
>Z49073-8|CAA88892.3| 771|Caenorhabditis elegans Hypothetical
protein ZK970.1a protein.
Length = 771
Score = 31.9 bits (69), Expect = 0.47
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 339 NYIYSKDQLSTFSEEHPVLLTEAPLNPRRNREKSAEIFFETFNVPALFLSMQAV 500
NY+ SK+ L T E+ P+LL AP N+E + E+ + P + ++Q V
Sbjct: 236 NYLNSKEHLITIYEQLPILL--APEKYHYNKELTPEMIYGKMEGPPVTRALQQV 287
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 31.1 bits (67), Expect = 0.81
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -3
Query: 660 SRSLRYLVTSRPATSTLMMLCGIANPSYMGTACVTPSPESSTAPVV 523
S S L +S P ST NPS G++ TP+P ST+PVV
Sbjct: 1246 SSSATSLSSSSPVPSTSQS----PNPSTSGSSTPTPNPSQSTSPVV 1287
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 536 VLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLR 652
V+DSG T G + S++R+DV G+ +T L+
Sbjct: 147 VVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLK 185
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 536 VLDSGDGVTHAVPIYEGFAMPHSIMRVDVAGRDVTKYLR 652
V+DSG T G + S++R+DV G+ +T L+
Sbjct: 147 VVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLK 185
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 502 SVLCNRSYHGCCTGLRRWSDARRPHIRGVRDAAQHHESR 618
++LCN S+H C L +W+D P R V+ E R
Sbjct: 273 AILCNHSFHARC--LEQWADNTCPVCRYVQSPEVVAEQR 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,718,114
Number of Sequences: 27780
Number of extensions: 370990
Number of successful extensions: 1164
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -