Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021203
         (762 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6RT35 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_A0DKD3 Cluster: Chromosome undetermined scaffold_54, wh...    35   2.5  

>UniRef50_A6RT35 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 532

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +2

Query: 545 AYLFPTVFQPFFYLSEPRSLIANYCGKRVITSRSG 649
           A +FP+  QPF YL    SLI+ + G R+ T++SG
Sbjct: 397 ASVFPSGLQPFAYLPSSASLISGFSGTRLSTTQSG 431


>UniRef50_A0DKD3 Cluster: Chromosome undetermined scaffold_54, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_54,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 265

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 13/38 (34%), Positives = 26/38 (68%)
 Frame = +1

Query: 340 LLQVLRKPIFNVSSQYSLLLLRQIGERLEQELQGYANE 453
           L+  ++  +++ SSQ +L L+R   +++EQEL G+ N+
Sbjct: 85  LIPYIKSSLYHYSSQRNLTLIRSYKKKIEQELNGFCND 122


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,918,518
Number of Sequences: 1657284
Number of extensions: 13786980
Number of successful extensions: 35241
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 33963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35234
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)