Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021203
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    25   0.66 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   3.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.1  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 453 VLNDSIPGVIIRPFTTLINLMFSCSVQFFLVLICFQLF 566
           VLN  I  + +R    ++ ++ +  + FFL LI F++F
Sbjct: 272 VLNKHIDNISLRARKQVVLMLGTVVLSFFLCLIPFRVF 309


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +1

Query: 61  SYNVVIIYSLC 93
           +Y VVIIYS+C
Sbjct: 126 AYGVVIIYSIC 136


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 625 FSTVISN*RSWLRKIKKRLENSWKQIS 545
           F+ +I    +W+R ++K L   WK  S
Sbjct: 127 FAYLIPEVGTWIRAVRKCLYKLWKMPS 153


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 625 FSTVISN*RSWLRKIKKRLENSWKQIS 545
           F+ +I    +W+R ++K L   WK  S
Sbjct: 127 FAYLIPEVGTWIRAVRKCLYKLWKMPS 153


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 292 RRRRFVHAGITFTHGY 339
           RRR F+ + ITF   Y
Sbjct: 273 RRREFIRSAITFIKQY 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,505
Number of Sequences: 336
Number of extensions: 3479
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)