Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021202
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       25   0.65 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    25   0.86 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.86 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.5  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   2.0  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = -1

Query: 238 HRHLLNYCQANHR*YRQPGYPGYRLEATLPRHRENRCE 125
           H H +N     HR   QPG+ G      +   + N CE
Sbjct: 41  HGHCVNLPGVGHRCQCQPGFTGKYCHENINDCKVNPCE 78


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 398 SFIYVHFIFSICITLFNY 345
           +F++V   FSICIT F Y
Sbjct: 236 NFLFVLSTFSICITQFYY 253


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 395 FIYVHFIFSICITLFNYRMLFL 330
           F  +H +F +C+  F   +LFL
Sbjct: 188 FFNMHLLFLLCLDYFTLHLLFL 209



 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 395 FIYVHFIFSICITLFNYRMLFL 330
           F Y+H +F     +F   +LFL
Sbjct: 261 FYYMHLLFCCAFIIFTMHLLFL 282


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = -3

Query: 398 SFIYVHFIFSICITLFN----YRMLFLSRRCNRRLYVQNIAAASWTTIRSKFS 252
           SF+Y H I    + LFN    Y+ L ++     +L +  +     TT+ S FS
Sbjct: 352 SFVYYHRILGETVDLFNSLFGYQTLLITFHIGSQLVLHTVKTVLKTTM-STFS 403


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 359 TLFNYRMLFLSRRCNRRLYVQNIAAASWTTIR 264
           +LF + ++FLS RC +     N  A  W  I+
Sbjct: 144 SLFIFDLIFLSFRCTKLCKEANKTAFLWYHIK 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,822
Number of Sequences: 336
Number of extensions: 2862
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)