Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV021201
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    94   1e-21
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    94   1e-21
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    84   9e-19
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.0  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 93.9 bits (223), Expect = 1e-21
 Identities = 45/52 (86%), Positives = 48/52 (92%)
 Frame = +2

Query: 353 INEPTAAAIAYGLDKKGTGERNVLIFYLGGGTFDVSILTIEDGIFEVKSTAG 508
           INEPTAAAIAYGLDKK   ERNVLIF LGGGTFDVS+LTIE+GIFEVK+TAG
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAG 52



 Score = 43.6 bits (98), Expect = 2e-06
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +1

Query: 511 THLGGEDFDNRMVNHFVQEFKRTYXXXXXXXXXXXXXXXXXCERAR 648
           THLGGEDFDNR+V +  Q+FK+ +                 CERA+
Sbjct: 54  THLGGEDFDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAK 99



 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +3

Query: 645 KRTLSSSTQAS 677
           KRTLSS+TQAS
Sbjct: 99  KRTLSSATQAS 109


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 93.9 bits (223), Expect = 1e-21
 Identities = 45/52 (86%), Positives = 48/52 (92%)
 Frame = +2

Query: 353 INEPTAAAIAYGLDKKGTGERNVLIFYLGGGTFDVSILTIEDGIFEVKSTAG 508
           INEPTAAAIAYGLDKK   ERNVLIF LGGGTFDVS+LTIE+GIFEVK+TAG
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAG 52



 Score = 43.6 bits (98), Expect = 2e-06
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +1

Query: 511 THLGGEDFDNRMVNHFVQEFKRTYXXXXXXXXXXXXXXXXXCERAR 648
           THLGGEDFDNR+V +  Q+FK+ +                 CERA+
Sbjct: 54  THLGGEDFDNRLVEYCTQDFKKKHKADISGNPRALRRLRTQCERAK 99



 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = +3

Query: 645 KRTLSSSTQAS 677
           KRTLSS+TQAS
Sbjct: 99  KRTLSSATQAS 109


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 84.2 bits (199), Expect = 9e-19
 Identities = 39/52 (75%), Positives = 48/52 (92%)
 Frame = +2

Query: 353 INEPTAAAIAYGLDKKGTGERNVLIFYLGGGTFDVSILTIEDGIFEVKSTAG 508
           INEPTAAAIAYGLDKKG  E+N+L++ LGGGTFDVSILTI++G+FEV +T+G
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSG 51



 Score = 33.5 bits (73), Expect = 0.002
 Identities = 11/24 (45%), Positives = 20/24 (83%)
 Frame = +1

Query: 511 THLGGEDFDNRMVNHFVQEFKRTY 582
           THLGGEDFD +++++F++  K+ +
Sbjct: 53  THLGGEDFDQKVMDYFIKMVKQKH 76


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +3

Query: 126 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 251
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 308 TKDAGTISGLNVLRIINEPTAA 373
           TKDAG +S   +  ++N+P  A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +1

Query: 469 HRGWYLRGEIHRRHTHLGGEDFDNRMVNH 555
           H  W    ++ R    + G+D+   MVNH
Sbjct: 458 HEPWTAPEQVQRAAKCIIGKDYSLPMVNH 486


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 487 RGEIHRRHTHLGGEDF 534
           RG +  R THL  +DF
Sbjct: 467 RGSVFVRFTHLQNQDF 482


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,661
Number of Sequences: 336
Number of extensions: 3727
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)