Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021201
(677 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 149 5e-37
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 145 4e-36
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 135 6e-33
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 133 3e-32
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 128 1e-30
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 68 1e-12
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 53 3e-08
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 44 3e-05
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 27 3.3
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 26 4.4
SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|ch... 26 4.4
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 26 5.8
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 26 5.8
SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces ... 25 7.6
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 7.6
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 149 bits (360), Expect = 5e-37
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +2
Query: 257 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFYL 436
+AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ GE NVLIF L
Sbjct: 139 DAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDL 198
Query: 437 GGGTFDVSILTIEDGIFEVKSTAG 508
GGGTFDVS+LTIE+GIFEVK+TAG
Sbjct: 199 GGGTFDVSLLTIEEGIFEVKATAG 222
Score = 140 bits (339), Expect = 2e-34
Identities = 64/84 (76%), Positives = 73/84 (86%)
Frame = +3
Query: 3 KNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 182
KNQVAMNP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF
Sbjct: 54 KNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFT 113
Query: 183 PEEVSSMVLTKMKETAEAYLGKTV 254
PEE+SSMVL KM+ETAEAYLG V
Sbjct: 114 PEEISSMVLMKMRETAEAYLGGKV 137
Score = 51.6 bits (118), Expect = 1e-07
Identities = 23/46 (50%), Positives = 27/46 (58%)
Frame = +1
Query: 511 THLGGEDFDNRMVNHFVQEFKRTYXXXXXXXXXXXXXXXXXCERAR 648
THLGGEDFD+R+VNHF+QEFKR CERA+
Sbjct: 224 THLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAK 269
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 145 bits (352), Expect = 4e-36
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +2
Query: 257 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFYL 436
+AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAYGLD+ E NVLIF L
Sbjct: 139 DAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDL 198
Query: 437 GGGTFDVSILTIEDGIFEVKSTAG 508
GGGTFDVS+LTIE+GIFEVK+TAG
Sbjct: 199 GGGTFDVSLLTIEEGIFEVKATAG 222
Score = 132 bits (320), Expect = 3e-32
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = +3
Query: 3 KNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 182
KNQVAMNP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF
Sbjct: 54 KNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFT 113
Query: 183 PEEVSSMVLTKMKETAEAYLGKTV 254
PEE+SSMVL KM+E+AEA+LG V
Sbjct: 114 PEEISSMVLLKMRESAEAFLGGKV 137
Score = 50.4 bits (115), Expect = 2e-07
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = +1
Query: 511 THLGGEDFDNRMVNHFVQEFKRTYXXXXXXXXXXXXXXXXXCERAR 648
THLGGEDFD+R+VNHF QEFKR CERA+
Sbjct: 224 THLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAK 269
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 135 bits (326), Expect = 6e-33
Identities = 66/85 (77%), Positives = 73/85 (85%)
Frame = +2
Query: 254 ENAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFY 433
E AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEPTAAAIAYGLD K +NVLIF
Sbjct: 142 EKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPKNVLIFD 201
Query: 434 LGGGTFDVSILTIEDGIFEVKSTAG 508
LGGGTFDVS+L I+ G+FEV +TAG
Sbjct: 202 LGGGTFDVSLLKIQGGVFEVLATAG 226
Score = 116 bits (280), Expect = 2e-27
Identities = 53/92 (57%), Positives = 66/92 (71%)
Frame = +3
Query: 3 KNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 182
KNQ AMNP NT+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F
Sbjct: 58 KNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFT 117
Query: 183 PEEVSSMVLTKMKETAEAYLGKTVRMQLSRFP 278
+E+S+MVLTKMKE +EA L K V + P
Sbjct: 118 AQEISAMVLTKMKEISEAKLNKRVEKAVITVP 149
Score = 49.2 bits (112), Expect = 5e-07
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = +1
Query: 511 THLGGEDFDNRMVNHFVQEFKRTYXXXXXXXXXXXXXXXXXCERAR 648
THLGGEDFDN +V HF+QEFKR CERA+
Sbjct: 228 THLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAK 273
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 133 bits (321), Expect = 3e-32
Identities = 60/84 (71%), Positives = 79/84 (94%)
Frame = +2
Query: 257 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFYL 436
+AV+TVPAYFND+QRQATKDAGTI+GLNV+RI+NEPTAAAIAYGLDK T E++++++ L
Sbjct: 172 HAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLDKTDT-EKHIVVYDL 230
Query: 437 GGGTFDVSILTIEDGIFEVKSTAG 508
GGGTFDVS+L+I++G+FEV +T+G
Sbjct: 231 GGGTFDVSLLSIDNGVFEVLATSG 254
Score = 108 bits (259), Expect = 8e-25
Identities = 48/84 (57%), Positives = 64/84 (76%)
Frame = +3
Query: 3 KNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 182
KNQ NP NTIFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F
Sbjct: 87 KNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFT 146
Query: 183 PEEVSSMVLTKMKETAEAYLGKTV 254
PEE+S+M+L+KMK+TAEAYLGK V
Sbjct: 147 PEEISAMILSKMKQTAEAYLGKPV 170
Score = 37.5 bits (83), Expect = 0.002
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 511 THLGGEDFDNRMVNHFVQEFKR 576
THLGGEDFDNR++N+ + + R
Sbjct: 256 THLGGEDFDNRVINYLARTYNR 277
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 128 bits (308), Expect = 1e-30
Identities = 60/88 (68%), Positives = 75/88 (85%)
Frame = +2
Query: 245 QNCENAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 424
++ +NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NEPTAAA+AYGLDKK + V
Sbjct: 181 KDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAALAYGLDKK--NDAIVA 238
Query: 425 IFYLGGGTFDVSILTIEDGIFEVKSTAG 508
+F LGGGTFD+SIL + +G+FEV+ST G
Sbjct: 239 VFDLGGGTFDISILELNNGVFEVRSTNG 266
Score = 74.1 bits (174), Expect = 2e-14
Identities = 35/92 (38%), Positives = 52/92 (56%)
Frame = +3
Query: 3 KNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 182
K Q +NP NT F KRLIGR+F++ VQ D+K P+++V + KT+
Sbjct: 103 KRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNG---DAWLEARGKTYS 159
Query: 183 PEEVSSMVLTKMKETAEAYLGKTVRMQLSRFP 278
P ++ +L+KM+ETA YLGK V+ + P
Sbjct: 160 PSQIGGFILSKMRETASTYLGKDVKNAVVTVP 191
Score = 36.3 bits (80), Expect = 0.004
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 511 THLGGEDFDNRMVNHFVQEFKR 576
THLGGEDFD +V H V+ FK+
Sbjct: 268 THLGGEDFDVALVRHIVETFKK 289
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 67.7 bits (158), Expect = 1e-12
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = +2
Query: 257 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGE----RNVL 424
+ VI++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG+ K E R V
Sbjct: 143 DVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGITKTDLPEPESPRRVA 202
Query: 425 IFYLGGGTFDVSILTIEDGIFEVKST 502
I G + VSI+ G F +KST
Sbjct: 203 IVDFGHSNYSVSIVEFSRGQFHIKST 228
Score = 35.9 bits (79), Expect = 0.005
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 KNQVAMNPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTF 179
K+ A N NT+ KRL GR ++D ++ + ++ G KV Y E+ F
Sbjct: 57 KSAEASNFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAF 116
Query: 180 FPEEVSSMVLTKMKETAEAYL 242
++ + TK+K AEA L
Sbjct: 117 SNIQLIAAYFTKIKAIAEAEL 137
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 53.2 bits (122), Expect = 3e-08
Identities = 23/77 (29%), Positives = 48/77 (62%)
Frame = +2
Query: 263 VITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFYLGG 442
V++VP YF D+QR+A + A +GL VL++I++P A +A ++ ++ V++ G
Sbjct: 167 VMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILALMYSEEVLIDKTVVVANFGA 226
Query: 443 GTFDVSILTIEDGIFEV 493
+VS+++++ G+ +
Sbjct: 227 TRSEVSVVSVKGGLMTI 243
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 43.6 bits (98), Expect = 3e-05
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 236 LSRQNCENAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK-GTGE 412
++ + + V+TVP +FN+ QR +A I +VL +I++ A AI Y L + T
Sbjct: 155 MAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVAVAIEYSLSRSFSTDP 214
Query: 413 RNVLIFYLGGGTFDVSILTIE 475
+I+ G G+ ++++ +
Sbjct: 215 TYNIIYDSGSGSTSATVISFD 235
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 3.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 537 QSHGEPLCPGVQEDIQKGPRXXQESS 614
QS G+PL PG ++ GP + SS
Sbjct: 599 QSIGDPLPPGAMANVSAGPSSVRSSS 624
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 26.2 bits (55), Expect = 4.4
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +2
Query: 389 LDKKGTGERNVLIFYLGGGTFDVSILTIEDGIFEVKSTAGTPTWEVRT 532
LDK G+ I GG T SIL +GI VK W T
Sbjct: 48 LDKAPAGKVKDYIASHGGHTVITSILIANNGIAAVKEIRSIRKWAYET 95
>SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 497
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 557 LSRSSRGHTKRTSLXTRELLGVCVLHVRGQE 649
+S +S GHTK+ + ++G CV ++ G +
Sbjct: 394 ISSNSAGHTKKVFMSAVSMIGYCVGNMVGPQ 424
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.8 bits (54), Expect = 5.8
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 510 VPAVDFTSKIPSSMVRMDTSKVPPP 436
VP+V FT + + ++R+ S +PPP
Sbjct: 377 VPSVMFTMRYLALILRVQNSNMPPP 401
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.8 bits (54), Expect = 5.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 429 FISAAVPSTCPSLPSRMVSSR*NPPP 506
F+ ++PST P++PS +S + PP
Sbjct: 295 FMKPSIPSTIPTIPSAYSASVSSQPP 320
>SPBC19G7.18c ||SPBC19G7.11c|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 252
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 216 MKETAEAYLGKTVRMQLSRFPRTSMTLKDKPQKMQVP-SQA*TFSESSMNP 365
+++ ++ + + M+ RFP +S K K Q+P S T + SS +P
Sbjct: 97 LRKIQDSLIRQRTTMRQGRFPSSSSEFPPKNSKYQLPGSMPNTGASSSQDP 147
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.4 bits (53), Expect = 7.6
Identities = 18/77 (23%), Positives = 35/77 (45%)
Frame = +3
Query: 90 ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVRMQLS 269
AD+++ +V S+ G+ K+K+A E+ E S+ + + ++ LS
Sbjct: 1583 ADLEYHKSQVESELGRSKLKLASTTEELQLAENERLSLTTRMLDLQNQVKDLSNIKDSLS 1642
Query: 270 RFPRTSMTLKDKPQKMQ 320
RT +L+D +Q
Sbjct: 1643 EDLRTLRSLEDSVASLQ 1659
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,969,996
Number of Sequences: 5004
Number of extensions: 62154
Number of successful extensions: 208
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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