Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021201
(677 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 151 4e-37
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 150 9e-37
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 150 9e-37
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 136 2e-32
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 93 2e-19
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 70 2e-12
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 30 1.5
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 6.0
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 28 8.0
SB_5221| Best HMM Match : PHD (HMM E-Value=6.8) 28 8.0
SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026) 28 8.0
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 151 bits (367), Expect = 4e-37
Identities = 74/84 (88%), Positives = 80/84 (95%)
Frame = +2
Query: 257 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFYL 436
+AV+TVPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+ L
Sbjct: 141 DAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDL 200
Query: 437 GGGTFDVSILTIEDGIFEVKSTAG 508
GGGTFDVS+LTIEDGIFEVKSTAG
Sbjct: 201 GGGTFDVSVLTIEDGIFEVKSTAG 224
Score = 139 bits (336), Expect = 2e-33
Identities = 62/84 (73%), Positives = 71/84 (84%)
Frame = +3
Query: 3 KNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 182
KNQVAMNP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FF
Sbjct: 56 KNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFF 115
Query: 183 PEEVSSMVLTKMKETAEAYLGKTV 254
PEE+SSMVLTKMKETAEAYLG V
Sbjct: 116 PEEISSMVLTKMKETAEAYLGAKV 139
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1
Query: 511 THLGGEDFDNRMVNHFVQEFKRTYXXXXXXXXXXXXXXXXXCERAR 648
THLGGEDFDN+MV+HFV++FK+ Y CERA+
Sbjct: 226 THLGGEDFDNKMVDHFVKQFKQKYKKDITPNKRAMRRLRTACERAK 271
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 150 bits (364), Expect = 9e-37
Identities = 74/84 (88%), Positives = 78/84 (92%)
Frame = +2
Query: 257 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFYL 436
+AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIF L
Sbjct: 234 DAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDL 293
Query: 437 GGGTFDVSILTIEDGIFEVKSTAG 508
GGGTFDVS+L+IEDGIFEVKST G
Sbjct: 294 GGGTFDVSVLSIEDGIFEVKSTHG 317
Score = 116 bits (279), Expect = 2e-26
Identities = 64/106 (60%), Positives = 71/106 (66%), Gaps = 25/106 (23%)
Frame = +3
Query: 3 KNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 182
KNQVAMNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF
Sbjct: 56 KNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFF 115
Query: 183 PEEV-------------------------SSMVLTKMKETAEAYLG 245
EEV SSMVL KMKETAEAYLG
Sbjct: 116 AEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLG 161
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/22 (90%), Positives = 22/22 (100%)
Frame = +2
Query: 257 NAVITVPAYFNDSQRQATKDAG 322
+AV+TVPAYFNDSQRQATKDAG
Sbjct: 166 DAVVTVPAYFNDSQRQATKDAG 187
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +1
Query: 511 THLGGEDFDNRMVNHFVQEFKRTYXXXXXXXXXXXXXXXXXCERAR 648
THLGGEDFDN MV+ FV++FK+ Y CERA+
Sbjct: 319 THLGGEDFDNNMVDFFVKQFKQKYKKDITPNKRALRRLRTACERAK 364
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3
Query: 189 EVSSMVLTKMKETAEAYLG 245
++SSMVL KMKETAEAYLG
Sbjct: 211 QISSMVLNKMKETAEAYLG 229
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 150 bits (364), Expect = 9e-37
Identities = 74/89 (83%), Positives = 82/89 (92%), Gaps = 1/89 (1%)
Frame = +2
Query: 245 QNCENAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVL 424
Q +AVITVPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVL
Sbjct: 137 QKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVL 196
Query: 425 IFYLGGGTFDVSILTIEDG-IFEVKSTAG 508
IF LGGGTFDVSILTI+DG +FEVKSTAG
Sbjct: 197 IFDLGGGTFDVSILTIDDGSLFEVKSTAG 225
Score = 139 bits (336), Expect = 2e-33
Identities = 64/92 (69%), Positives = 76/92 (82%)
Frame = +3
Query: 3 KNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 182
KNQVA+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF
Sbjct: 56 KNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFA 115
Query: 183 PEEVSSMVLTKMKETAEAYLGKTVRMQLSRFP 278
EE+SSMVL KMKETAEAYLG+ V + P
Sbjct: 116 AEEISSMVLGKMKETAEAYLGQKVTSAVITVP 147
Score = 55.2 bits (127), Expect = 5e-08
Identities = 25/46 (54%), Positives = 27/46 (58%)
Frame = +1
Query: 511 THLGGEDFDNRMVNHFVQEFKRTYXXXXXXXXXXXXXXXXXCERAR 648
THLGGEDFDNR+VNHFV EFKR Y CERA+
Sbjct: 227 THLGGEDFDNRLVNHFVAEFKRKYKKDMSKNSRAMRRLRTACERAK 272
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 136 bits (328), Expect = 2e-32
Identities = 63/84 (75%), Positives = 77/84 (91%)
Frame = +2
Query: 257 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFYL 436
+AV+TVPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+F L
Sbjct: 839 HAVVTVPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDL 897
Query: 437 GGGTFDVSILTIEDGIFEVKSTAG 508
GGGTFDVS+LTI++G+FEV +T G
Sbjct: 898 GGGTFDVSLLTIDNGVFEVVATNG 921
Score = 113 bits (272), Expect = 1e-25
Identities = 53/84 (63%), Positives = 65/84 (77%)
Frame = +3
Query: 3 KNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFF 182
KNQ+ NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF
Sbjct: 754 KNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFA 813
Query: 183 PEEVSSMVLTKMKETAEAYLGKTV 254
EE+S+MVLTKMKETAEAYLGK V
Sbjct: 814 AEEISAMVLTKMKETAEAYLGKKV 837
Score = 35.9 bits (79), Expect = 0.030
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 511 THLGGEDFDNRMVNHFVQEFKR 576
THLGGEDFD ++ HF++ +K+
Sbjct: 923 THLGGEDFDQNVMEHFIKLYKK 944
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 92.7 bits (220), Expect = 2e-19
Identities = 46/83 (55%), Positives = 61/83 (73%)
Frame = +2
Query: 260 AVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFYLG 439
AV++VPA F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ LG
Sbjct: 172 AVMSVPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLG 230
Query: 440 GGTFDVSILTIEDGIFEVKSTAG 508
GGT DVS+L I+ G+F + AG
Sbjct: 231 GGTLDVSLLNIQGGMFVTMAMAG 253
Score = 54.8 bits (126), Expect = 6e-08
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 1/92 (1%)
Frame = +3
Query: 6 NQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFF 182
+Q +NP NTI+DAKR IG+ F + K + F V +D G V KG
Sbjct: 86 SQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVIT 145
Query: 183 PEEVSSMVLTKMKETAEAYLGKTVRMQLSRFP 278
PEE+ V+ K++ AE L TV + P
Sbjct: 146 PEEIGGYVIKKLRTMAERNLTTTVTKAVMSVP 177
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 70.1 bits (164), Expect = 2e-12
Identities = 47/84 (55%), Positives = 52/84 (61%), Gaps = 26/84 (30%)
Frame = +2
Query: 245 QNCENAVITVPAYFNDSQRQATKDAGTISGLN------------------------VLRI 352
Q + AVITVPA+FND+QRQATKDAGTI+GL+ VLRI
Sbjct: 36 QAVKRAVITVPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRI 95
Query: 353 INEPTAAAIAYGLDKK--GTGERN 418
INEPTAAAIAYGLDK G ERN
Sbjct: 96 INEPTAAAIAYGLDKARGGKAERN 119
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +3
Query: 144 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVRMQLSRFP 278
I V GE ++F PE++S++VL ++K AEA+LG+ V+ + P
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +3
Query: 21 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 197
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 198 SMVLTKMKETAEAYL 242
+M+ T++K TAE L
Sbjct: 178 AMLFTRLKTTAEIAL 192
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = +2
Query: 257 NAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLI 427
+ VI+VP+Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+
Sbjct: 198 DCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVF 257
Query: 428 FYLGGGTFDVSILTIEDGIFEVKSTAGTP 514
+G + V I G +V STA P
Sbjct: 258 VDIGHSSLQVCITAFLKGQLKVLSTAVEP 286
Score = 34.7 bits (76), Expect = 0.070
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +1
Query: 514 HLGGEDFDNRMVNHFVQEFKRTY 582
+LGG DFD +V HF QEFK Y
Sbjct: 287 NLGGRDFDYVLVEHFAQEFKTKY 309
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/75 (34%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Frame = +2
Query: 254 ENAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNV 421
++ V+TVP +FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++
Sbjct: 106 KDVVLTVPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHF 165
Query: 422 LIFYLGGGTFDVSIL 466
+ + +G + +I+
Sbjct: 166 MFYDMGASSTVATIV 180
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +2
Query: 419 VLIFYLGGGTFDVSILTIEDGIFEVKSTAG 508
+ ++ LGGGTFD+SIL I+ G+FEVK+T G
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNG 31
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 511 THLGGEDFDNRMVNHFVQEFKR 576
T+LGGEDFDN ++ + EFK+
Sbjct: 33 TYLGGEDFDNTLLKFLIAEFKK 54
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +3
Query: 135 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVRMQLSRFPRTSMTLKDKPQK 314
+PK K + E+ EE +M ++K LGK V+ QL ++TL + Q
Sbjct: 654 QPKFKKTKEEEEFDKLLEEADAMTQQEVKNVKNIKLGKNVKTQLYTCEPCNITLNSQKQM 713
Query: 315 MQ 320
Q
Sbjct: 714 SQ 715
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 555 LCPGVQEDIQKGPRXXQESS*AFAYCM*EGK 647
LCP +++ + GP +E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -2
Query: 232 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 53
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 52 RLASNIVL 29
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_53017| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1488
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 182 PRGSQFHGAYENEGNCRSLSRQNCENAVITVPAYFN 289
PRG Q Y G+C S+S++NC V +N
Sbjct: 1142 PRGKQI--PYGTAGDCYSVSQENCRKGSFKVTYQYN 1175
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -2
Query: 493 HLEDTILDGKDGHVEGTAAEIKDKYISFSSTLFVKTVSNRSSSG 362
H+EDT DG DG E +E K + S SN+ G
Sbjct: 486 HIEDTTWDGSDGQREAGFSEQKAERSSSGGNRTTHGASNKPRDG 529
>SB_5221| Best HMM Match : PHD (HMM E-Value=6.8)
Length = 94
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 547 PCDCQSPHLPSGCAGGGFHLEDTILDGKDGHV 452
P DC H CA G+H+E L KD +V
Sbjct: 40 PIDCGGSHEQYRCACEGYHIECVKLADKDENV 71
>SB_50521| Best HMM Match : MFS_1 (HMM E-Value=0.0026)
Length = 1080
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 242 RQNCENAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTG 409
R NA +T+P YF + +K G G+ + +++ I+Y LD+K TG
Sbjct: 1017 RNKIYNAPLTLPPYFWCHPSRKSKKDGAKEGMAM--AMSKERNQEISYKLDRKWTG 1070
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,208,441
Number of Sequences: 59808
Number of extensions: 494949
Number of successful extensions: 1666
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1657
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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