Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021200
(719 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase... 127 2e-30
SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d... 121 9e-29
SPCC13B11.01 |adh1|adh|alcohol dehydrogenase Adh1|Schizosaccharo... 42 9e-05
SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces p... 32 0.072
SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces pombe... 32 0.095
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 29 0.51
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 1.2
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 1.5
SPAC1F12.05 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.0
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr... 27 2.7
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 27 3.6
SPBC17D1.05 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 26 4.7
SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein Utp5|Schiz... 25 8.2
SPAC824.09c |||GTPase activating protein |Schizosaccharomyces po... 25 8.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 25 8.2
>SPBC1539.07c |||glutathione-dependent formaldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 127 bits (306), Expect = 2e-30
Identities = 52/93 (55%), Positives = 71/93 (76%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELY 432
GV +V+PGDHV+ LY P+C CKFC + KTNLC K+R TQG+G+MPDGT RF C+ + L
Sbjct: 81 GVINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQGRGLMPDGTSRFSCRDKTLL 140
Query: 433 HFMGCSTFSQYTVVLEISLCKVAEAVH*IKFVC 531
H+MGCS+FSQYTVV +ISL ++ + ++ +C
Sbjct: 141 HYMGCSSFSQYTVVADISLVAISHSAP-LRSIC 172
Score = 100 bits (240), Expect = 2e-22
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2
Query: 14 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 193
MS GK I C AAVAW A +PLSIE+I+V PPKA EVRVK+ + VCHTDAYTLSG DPE
Sbjct: 1 MSFEGKTITCKAAVAWGAKEPLSIEDIQVAPPKAHEVRVKVDWSAVCHTDAYTLSGVDPE 60
Query: 194 GVFPVVL 214
G FP+VL
Sbjct: 61 GAFPIVL 67
Score = 43.2 bits (97), Expect = 4e-05
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVET 590
PL +CLLGCGV TG+GA ++AKVE+
Sbjct: 167 PLRSICLLGCGVTTGFGAVTHSAKVES 193
>SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde
dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 121 bits (292), Expect = 9e-29
Identities = 50/81 (61%), Positives = 64/81 (79%)
Frame = +1
Query: 256 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYH 435
VT+V+ GD V+ LY P+C TCKFC + KTNLC ++R+TQG+G+MPDGT RF C G L H
Sbjct: 85 VTTVQVGDPVIALYTPECKTCKFCKSGKTNLCGRIRTTQGKGLMPDGTSRFSCNGNTLLH 144
Query: 436 FMGCSTFSQYTVVLEISLCKV 498
FMGCSTFS+YTVV +IS+ +
Sbjct: 145 FMGCSTFSEYTVVADISVVAI 165
Score = 103 bits (248), Expect = 2e-23
Identities = 44/65 (67%), Positives = 53/65 (81%)
Frame = +2
Query: 20 TVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGV 199
T GK+I C AAVAW+ PLSIE ++V PP+ EVR+KI +GVCHTDAYTLSGKDPEG+
Sbjct: 6 TAGKIINCKAAVAWQPAAPLSIENVQVFPPRVHEVRIKIVNSGVCHTDAYTLSGKDPEGL 65
Query: 200 FPVVL 214
FPV+L
Sbjct: 66 FPVIL 70
Score = 45.2 bits (102), Expect = 1e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +3
Query: 501 RGGPLDKVCLLGCGVPTGYGAALNTAKVE 587
R PLD VCLLGCG+ TGYGAA TA ++
Sbjct: 167 RLAPLDSVCLLGCGITTGYGAATITADIK 195
>SPCC13B11.01 |adh1|adh|alcohol dehydrogenase
Adh1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 350
Score = 41.9 bits (94), Expect = 9e-05
Identities = 25/53 (47%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +2
Query: 38 KCLAAVAWEAGKPLSI--EEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDP 190
K LAAV G P ++ EE+ V P EV V I TGVCHTD + L G P
Sbjct: 6 KQLAAVFHTHGGPENVKFEEVPVAEPGQDEVLVNIKYTGVCHTDLHALQGDWP 58
>SPBC1773.05c |tms1||hexitol dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 360
Score = 32.3 bits (70), Expect = 0.072
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLC 351
GV+S+KPGD V C C +C + + NLC
Sbjct: 79 GVSSLKPGDPVAVEPGCVCRLCDYCRSGRYNLC 111
>SPBC337.11 |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 325
Score = 31.9 bits (69), Expect = 0.095
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 77 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVVL 214
+ I+ + + PK GE+ VKI A + +D +G P V+P ++
Sbjct: 23 IEIQSVPIPQPKNGELLVKIEAAAINPSDLMNATGGFPYTVYPRIV 68
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 29.5 bits (63), Expect = 0.51
Identities = 22/67 (32%), Positives = 37/67 (55%)
Frame = -3
Query: 261 SDSSPTLYTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSM 82
S+ S TL + + PST+ +TPS S S SV + ++ TS + S+SI+++
Sbjct: 505 SEVSSTLLS-GSSAIPSTSSSTPSSSIISSPMTSVLSSSSSI---PTSSSSDFSSSITTI 560
Query: 81 DSGLPAS 61
SG+ +S
Sbjct: 561 SSGISSS 567
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.3 bits (60), Expect = 1.2
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = -3
Query: 261 SDSSPTLYTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSM 82
+ SS T ++ S STT TP+ S S +S + A + S + +TS ++
Sbjct: 150 ASSSTTSSSLASSSTNSTTSATPTSSATSSSLSSTAASNSATSSSLASSSLNSTTSATAT 209
Query: 81 DSGLPASHAT 52
S L ++ A+
Sbjct: 210 SSSLSSTAAS 219
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 1.5
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 255 SSPTLYTIPPPSCPSTT-GNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISS 85
S+P T+PP S ST+ P+ + +S T T TS GGS+S+S+
Sbjct: 188 STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSCTTSTSIPTGGSSSLST 245
Score = 27.5 bits (58), Expect = 2.0
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = -3
Query: 261 SDSSPTLYTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSM 82
++SSP T SC ++T P+G+ V +V T + T PA ST SS
Sbjct: 273 TNSSPLPTT--STSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSS- 329
Query: 81 DSGLPASHATAAKHLITLPTVDMT 10
S LP++ + PT + T
Sbjct: 330 -SPLPSTSTSCTTSTSIPPTGNST 352
Score = 27.5 bits (58), Expect = 2.0
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Frame = -3
Query: 261 SDSSPTLYTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRT--SPAFGGSTSIS 88
+ +S T T PP+ STT TP+ + S P + T T SP STS +
Sbjct: 335 TSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCT 394
Query: 87 SMDSGLPASHATAAKHLITLPTVDMTAL 4
+ S P ++T PT T L
Sbjct: 395 TSTSIPPTGNSTTPVTPTVPPTSSSTPL 422
Score = 26.2 bits (55), Expect = 4.7
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = -3
Query: 255 SSPTLYTIPPPSCPSTT-GNTPSGSFPESVYASVWQTPVAVILTRTS-PAFGGSTSISS 85
S+P T+PP S ST+ P+ + ++ T T TS P GGS+S+S+
Sbjct: 131 STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTSTSCTTSTSIPPTGGSSSLST 189
>SPAC1F12.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 377
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3
Query: 255 SSPTLYTIPPPSCPS 211
SSPT +PPPSCP+
Sbjct: 358 SSPTDIPLPPPSCPT 372
>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1250
Score = 27.1 bits (57), Expect = 2.7
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 274 GDHVVPLY-VPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQEL 429
G HVV L V N C + KT KV + + P G+R++ C G L
Sbjct: 1036 GKHVVRLLQVRDANGCAASIT-KTQPAAKVSVVEMASLAPLGSRQYYCVGDRL 1087
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -3
Query: 270 LD*SDSSPTLYTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSI 91
+D ++S T P S PST + + F P+ LT S + STS
Sbjct: 273 IDAENASSRQETTPSDSRPSTLTSLFNAFFSSMPDRPSSNEPMTSNLTSNSGSMTNSTST 332
Query: 90 SSMDSGLPASHATA 49
S LP+ +A A
Sbjct: 333 DLPTSNLPSQNAPA 346
>SPBC17D1.05 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 368
Score = 26.2 bits (55), Expect = 4.7
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 10/78 (12%)
Frame = -3
Query: 261 SDSSPTLYTIPPPSCPSTTGN-TP---------SGSFPESVYASVWQTPVAVILTRTSPA 112
+ S+PT T+ PP+ P+ GN TP P+S +SV + + L
Sbjct: 266 NSSTPTDQTLRPPNPPAANGNATPVTAVNNVSAVADSPQSTGSSVSSSLPTLSLDFKQEY 325
Query: 111 FGGSTSISSMDSGLPASH 58
G + +S + S L SH
Sbjct: 326 SGNNHDMSGLSSSLSKSH 343
>SPAC20H4.01 ||SPAC631.03|U3 snoRNP-associated protein
Utp5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 666
Score = 25.4 bits (53), Expect = 8.2
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 38 KCLAAVAWEAGKPL-SIEEIEVDPPKAGEVRVKITATG 148
K ++ +AWE KPL + E+I D +GE+ V T +G
Sbjct: 63 KVISCIAWEQ-KPLYASEQITTDISGSGEILVLGTNSG 99
>SPAC824.09c |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 320
Score = 25.4 bits (53), Expect = 8.2
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 14/80 (17%)
Frame = -3
Query: 255 SSPTLYTIPPPSCPSTTGNTPSGSFPE------SVYASVWQTPV-------AVILTRTSP 115
++ T +P P STT + P G+F + S A W+ P+ A R SP
Sbjct: 237 TNATYQNLPSPVSTSTTSSQPYGAFHQPATTGSSFVADKWKMPMFTSNVTSAQPSARASP 296
Query: 114 AFGGST-SISSMDSGLPASH 58
S+ SS+DS + SH
Sbjct: 297 VQSNSSRPRSSLDSKIINSH 316
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.4 bits (53), Expect = 8.2
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -3
Query: 255 SSPTLYTIPPPSCPST 208
SSPT Y PPP CP+T
Sbjct: 209 SSPTSY--PPPLCPAT 222
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,888,439
Number of Sequences: 5004
Number of extensions: 58913
Number of successful extensions: 181
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 177
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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