Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021200
(719 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 107 1e-23
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 95 5e-20
11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 93 3e-19
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 89 4e-18
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 75 8e-14
03_01_0635 - 4660692-4660737,4660783-4660829,4661371-4661507,466... 69 4e-12
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 68 9e-12
03_01_0633 - 4649267-4649383,4649480-4649641,4649735-4649895,465... 68 9e-12
03_01_0636 - 4664472-4664588,4664695-4664856,4664984-4665061,466... 64 1e-10
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 57 1e-08
07_03_1306 - 25643469-25643609,25644008-25644169,25644496-256446... 56 2e-08
03_01_0012 - 101584-101898,102274-102531,102932-103474 41 0.001
10_08_0923 + 21597593-21597629,21598089-21598135,21598253-215983... 36 0.043
09_04_0028 - 13928542-13929538,13929736-13929818 33 0.30
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 33 0.30
09_04_0362 - 16953108-16953155,16953478-16953562,16953626-169537... 31 0.70
09_04_0029 - 13932414-13933416,13933821-13933903 31 0.70
09_04_0030 + 13940168-13940250,13940703-13941714 31 0.92
07_03_1723 - 29038701-29039213,29039341-29039413,29039504-290395... 31 1.2
02_05_1140 + 34386042-34386302,34386738-34386917,34386999-343870... 31 1.2
09_04_0031 + 13946692-13946774,13947007-13948012 30 1.6
06_03_0305 + 19388745-19388963,19389069-19389209,19389799-193898... 30 1.6
01_05_0179 + 18973795-18973992,18974087-18974276,18974374-189745... 30 1.6
01_06_1309 - 36170947-36171077,36171227-36172198,36172285-361724... 30 2.1
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 29 2.8
10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869 29 3.7
09_04_0564 + 18565583-18566449,18569662-18570123 29 3.7
01_01_0081 + 623135-623470 29 4.9
03_02_0208 + 6420576-6420658,6421640-6421753,6421848-6422379,642... 28 6.5
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 28 6.5
08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413 28 8.6
08_02_0538 - 18321101-18321128,18321767-18322587 28 8.6
08_01_1024 - 10349061-10349200,10349373-10350040,10350478-103505... 28 8.6
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 107 bits (256), Expect = 1e-23
Identities = 48/83 (57%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGV-MPDGTRRFRCKGQEL 429
GVT V+PGDHV+P Y +C CKFC + KTNLC KVR+ G GV M D RF G+ +
Sbjct: 83 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPI 142
Query: 430 YHFMGCSTFSQYTVVLEISLCKV 498
YHFMG STFSQYTVV ++S+ K+
Sbjct: 143 YHFMGTSTFSQYTVVHDVSVAKI 165
Score = 102 bits (244), Expect = 3e-22
Identities = 44/66 (66%), Positives = 55/66 (83%)
Frame = +2
Query: 17 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 196
ST G+VI C AAVAWEA +P++IE+++V PP+AGEVRVKI T +CHTD YT SGKDPEG
Sbjct: 4 STQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63
Query: 197 VFPVVL 214
+FP +L
Sbjct: 64 LFPCIL 69
Score = 50.0 bits (114), Expect = 2e-06
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVE 587
PLDKVCLLGCGV TG GA NTAKVE
Sbjct: 170 PLDKVCLLGCGVSTGLGAVWNTAKVE 195
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 95.1 bits (226), Expect = 5e-20
Identities = 45/67 (67%), Positives = 50/67 (74%)
Frame = +2
Query: 14 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 193
M+T GKVIKC AAVAWEAGKPLSIEE+EV PP+A EVRVKI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWEAKGQT 60
Query: 194 GVFPVVL 214
VFP +L
Sbjct: 61 PVFPRIL 67
Score = 83.8 bits (198), Expect = 1e-16
Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQEL 429
GVT + PGDHV+P++ +C C C + ++N+C +R +GVM DG RF KG+ +
Sbjct: 81 GVTELAPGDHVLPVFTGECKECDHCKSEESNMCDLLRINVDRGVMIGDGKSRFTIKGKPI 140
Query: 430 YHFMGCSTFSQYTVVLEISLCKV 498
+HF+G STFS+YTV+ L K+
Sbjct: 141 FHFVGTSTFSEYTVIHVGCLAKI 163
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAK 581
PLDKVC+L CG TG+GA +N AK
Sbjct: 168 PLDKVCILSCGFSTGFGATVNVAK 191
>11_01_0689 -
5678227-5678343,5678475-5678636,5678751-5678846,
5679345-5679406,5679648-5679723,5679847-5679929,
5680525-5680853,5681402-5681448,5681707-5681843,
5682093-5682126
Length = 380
Score = 92.7 bits (220), Expect = 3e-19
Identities = 46/88 (52%), Positives = 53/88 (60%)
Frame = +2
Query: 14 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 193
M+T GKVIKC AAVAWEAGKPLSIEE+EV PP+A EVR+KI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRLKILYTALCHTDVYFWEAKGQT 60
Query: 194 GVFPVVLXXXXXXXXXXXXXXXLQSSPG 277
VFP + + SPG
Sbjct: 61 PVFPRIFGHEAGGIVESVGEGVTELSPG 88
Score = 85.0 bits (201), Expect = 5e-17
Identities = 37/76 (48%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCK-GQE 426
GVT + PGDHV+P++ +C C+ CL+ ++NLC +R +G M DG RF + GQ
Sbjct: 81 GVTELSPGDHVLPVFTGECGDCRHCLSEESNLCDLLRINTDRGAMIGDGQTRFTARGGQP 140
Query: 427 LYHFMGCSTFSQYTVV 474
+YHF+G STFS+YTVV
Sbjct: 141 VYHFLGTSTFSEYTVV 156
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAK 581
PLDKVC+L CG+ TG+GA +N AK
Sbjct: 169 PLDKVCVLSCGISTGFGATVNVAK 192
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 88.6 bits (210), Expect = 4e-18
Identities = 42/64 (65%), Positives = 46/64 (71%)
Frame = +2
Query: 14 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 193
M+T GKVIKC AAVAWEA KPL IEE+EV PP+A EVRVKI T +CHTD Y K
Sbjct: 1 MATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQT 60
Query: 194 GVFP 205
VFP
Sbjct: 61 PVFP 64
Score = 82.2 bits (194), Expect = 4e-16
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQEL 429
GVT + PGDHV+P++ +C C C + ++N+C +R +GVM DG RF G+ +
Sbjct: 81 GVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPI 140
Query: 430 YHFMGCSTFSQYTVV 474
YHF+G STFS+YTV+
Sbjct: 141 YHFVGTSTFSEYTVM 155
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAK 581
PLDKVC+L CG+ TG GA +N AK
Sbjct: 168 PLDKVCVLSCGISTGLGATINVAK 191
>02_05_0070 -
25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 74.5 bits (175), Expect = 8e-14
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQEL 429
GVT + GDHV+ +++ +C +CK C++ K+N+CQK+ + +GVM D RF +G+ +
Sbjct: 697 GVTEFEVGDHVLTVFIGECMSCKHCVSGKSNMCQKL-GLERRGVMHSDQKTRFSLRGKPV 755
Query: 430 YHFMGCSTFSQYTVVLEISLCKVAEAV 510
YH+ S+FS+YTVV KV V
Sbjct: 756 YHYCAVSSFSEYTVVHSGCAVKVGPTV 782
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +2
Query: 8 AVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKD 187
A S+ I C AAVAW G+ L +EE+EV PP+A E+RVK+ +T +C +D
Sbjct: 615 AAASSPAAAITCRAAVAWAPGQALVMEEVEVAPPEAMEIRVKVVSTSICRSDVTQWQSTA 674
Query: 188 PEGVFP 205
+FP
Sbjct: 675 QTDLFP 680
Score = 35.5 bits (78), Expect = 0.043
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKV 584
P+D++CLL CGV G GAA A +
Sbjct: 783 PMDRICLLSCGVSAGLGAAWKVADI 807
>03_01_0635 -
4660692-4660737,4660783-4660829,4661371-4661507,
4661661-4661697
Length = 88
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +2
Query: 35 IKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFP 205
I+C AAV AG+PL++EEI VDPPKA EVR+KI T +CH+D +D GVFP
Sbjct: 9 IRCKAAVCRAAGEPLAVEEIVVDPPKAHEVRIKIVCTSLCHSDVTFWRMQDFPGVFP 65
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 67.7 bits (158), Expect = 9e-12
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRF----RCK 417
GV + PGDHVVP++ +C C +C + K+NLC+ R + M DG RF R
Sbjct: 99 GVEDLAPGDHVVPIFTGECGACTYCESSKSNLCKTYRVNPFKSTMVTDGGTRFTMIDRSS 158
Query: 418 G--QELYHFMGCSTFSQYTVV 474
G +YHF+ STF++YTV+
Sbjct: 159 GARNPVYHFLNTSTFAEYTVI 179
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/72 (44%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +2
Query: 2 SSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 181
+ A T GK IKC AAVA G+ L +EE+EV PP EVR+K+ T +CHTD G
Sbjct: 14 NGAGADTKGKPIKCKAAVAHGPGEALVMEEVEVAPPARMEVRLKVLFTSICHTDLSAWKG 73
Query: 182 KDP-EGVFPVVL 214
++ + FP +L
Sbjct: 74 ENELQRKFPRIL 85
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKV 584
PL+K+ LL CGV TG GAA NTA V
Sbjct: 192 PLEKMSLLSCGVSTGVGAAWNTANV 216
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +2
Query: 668 NRIIGVDINPDKF 706
+RIIGVDINP+KF
Sbjct: 244 SRIIGVDINPEKF 256
>03_01_0633 -
4649267-4649383,4649480-4649641,4649735-4649895,
4650056-4650080,4650155-4650237,4650332-4650704
Length = 306
Score = 67.7 bits (158), Expect = 9e-12
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 274 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCK-GQELYHFMGCS 450
GD VVP ++ QC C C + ++N+C R G+ DGT RFR + G ++HF+G S
Sbjct: 31 GDPVVPTFLGQCTECVDCASERSNVCSTYRFAVRPGMPRDGTARFRDRHGAPIHHFLGVS 90
Query: 451 TFSQYTVVLEISLCKVAEAV 510
+FS+YTVV + +V AV
Sbjct: 91 SFSEYTVVDANQVVRVDPAV 110
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 528 LLGCGVPTGYGAALNTAKVE 587
LL CG TG GAA AKVE
Sbjct: 117 LLSCGATTGVGAAWKLAKVE 136
>03_01_0636 -
4664472-4664588,4664695-4664856,4664984-4665061,
4665157-4665221,4665476-4665558,4666052-4666414,
4666512-4666555,4666632-4666765,4666881-4666917
Length = 360
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2
Query: 29 KVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPV 208
K I+C AAV A +PL +EEI VDPPKA E+R+KI T +CHTD DP FP
Sbjct: 7 KPIRCKAAVCRAASEPLIVEEIVVDPPKAYEIRIKIICTSLCHTDVTLWHKVDP--AFPR 64
Query: 209 VL 214
+L
Sbjct: 65 IL 66
Score = 60.9 bits (141), Expect = 1e-09
Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +1
Query: 256 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRF-RCKGQELY 432
V + GD VVP ++ QC++C C TN C V T G G+ DGT RF +G+ L
Sbjct: 81 VEGLAAGDTVVPTFMGQCDSCASCAAEWTNQCTAVPFTMGPGMRRDGTTRFWDGEGKPLS 140
Query: 433 HFMGCSTFSQYTVVLEISLCKVAEAV 510
+ ++FSQYTVV + KV AV
Sbjct: 141 DTVAVTSFSQYTVVDVNQVVKVDPAV 166
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +2
Query: 50 AVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDP 190
AV WE G+PL++E+ + PKAGE+ +K A GVCH+D + L G+ P
Sbjct: 53 AVFWEPGRPLTLEDFRMPRPKAGELLIKTKACGVCHSDLHVLKGELP 99
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +1
Query: 274 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRS-TQGQGVMPDG-TRRF-RCKGQELYHFMG 444
G HVV ++ C C +C+ + +LC+ + + +G + DG TR F R G+ +Y +
Sbjct: 132 GSHVVGAFIMPCGNCFYCVKGQEDLCESFFAYNRAKGTLYDGQTRLFLRSNGKPVYMY-S 190
Query: 445 CSTFSQYTVV 474
++Y VV
Sbjct: 191 MGGLAEYCVV 200
>07_03_1306 -
25643469-25643609,25644008-25644169,25644496-25644659,
25645117-25645192,25645569-25645651,25646393-25646669
Length = 300
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Frame = +1
Query: 283 VVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMP-DGTRRFR--CKGQELYHFMGCST 453
VVP++ QC+ C CL+ ++NLC K+ + G+MP D T RF G+ + HF+ S+
Sbjct: 2 VVPVFAAQCSECPDCLSDRSNLCSKLPNV--AGLMPRDRTTRFSSVSTGEPIRHFLSVSS 59
Query: 454 FSQYTVV 474
F++YTVV
Sbjct: 60 FAEYTVV 66
Score = 33.1 bits (72), Expect = 0.23
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +3
Query: 504 GGPLDKVCLLGCGVPTGYGAALNTAKVE 587
G P CLL CG+ TG GAA A VE
Sbjct: 77 GFPPAMACLLSCGISTGVGAAWKVAAVE 104
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 671 RIIGVDINPDKF 706
RIIGVD+NPDKF
Sbjct: 132 RIIGVDLNPDKF 143
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +2
Query: 32 VIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 181
V+KC+ + L E++EV PK GE+R+K TA GV D Y G
Sbjct: 46 VVKCIRVHELGGPEVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQG 95
>10_08_0923 +
21597593-21597629,21598089-21598135,21598253-21598391,
21598449-21598562,21599206-21599432,21599578-21599835,
21600014-21600304,21600766-21600830,21601116-21601299,
21601857-21601964
Length = 489
Score = 35.5 bits (78), Expect = 0.043
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 77 LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 193
L+ EE+E+ P GE+R+K A GV + D Y +G E
Sbjct: 30 LTWEEVEIGEPSEGEIRIKNKAIGVNYVDIYYRTGLHQE 68
>09_04_0028 - 13928542-13929538,13929736-13929818
Length = 359
Score = 32.7 bits (71), Expect = 0.30
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 119 EVRVKITATGVCHTDAYTLSGKDPEGVFPVV 211
+V +K+ G+CHTD +T+ + ++PVV
Sbjct: 34 DVTIKVLYCGICHTDLHTIKNEWGNAMYPVV 64
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +2
Query: 92 IEVDPPKAGE--VRVKITATGVCHTDAYTLSGKDPEGVFPVV 211
I + K G+ V +K+ G+CH+D +T+ + V+PVV
Sbjct: 38 IRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVV 79
>09_04_0362 -
16953108-16953155,16953478-16953562,16953626-16953702,
16954601-16954641,16955140-16955644,16955897-16956316
Length = 391
Score = 31.5 bits (68), Expect = 0.70
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 255 SSPTLYTIPPPSCPSTTGNTPS-GSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSM 82
S+PTL + P PS T TPS S P S++ TP T + +FGG++ + SM
Sbjct: 271 STPTLGSTPAPSGFGNT--TPSFASTPALGGTSLFSTPFGGGATASGSSFGGTSLLGSM 327
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 47 AAVAWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVV 211
AAV W A LS K +V +K+ G+CHTD + + ++PVV
Sbjct: 7 AAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHVVKNDWGNAMYPVV 64
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +1
Query: 253 GVTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLC 351
GVT K GD V V +V C TC C N C
Sbjct: 79 GVTKFKAGDTVGVGFFVGSCRTCDSCGKGYENYC 112
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 31.1 bits (67), Expect = 0.92
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 47 AAVAWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVV 211
AAV W A LS K +V +K+ G+CHTD + + ++PVV
Sbjct: 7 AAVGWAARDDSGVLSPYNFSRRAQKDDDVTIKVLYCGICHTDLHIVKNDWGNAMYPVV 64
>07_03_1723 - 29038701-29039213,29039341-29039413,29039504-29039594,
29039684-29039741,29039829-29039905,29040004-29040214,
29040339-29040386,29042496-29042608,29043270-29043341,
29044372-29046336,29046434-29046641,29046847-29047165,
29047813-29047937,29048024-29048157,29049089-29049164,
29049276-29049428,29049829-29050532,29050636-29050811,
29050945-29051107,29051199-29051341,29051802-29051914,
29053113-29053237,29053867-29054016,29054753-29054921,
29055201-29055418,29055499-29055709
Length = 2135
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -3
Query: 252 SPTLYTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGS-TSISSMDS 76
S +L +IP P S+TG S PE V + V T V+ + + P G +SI +
Sbjct: 1344 SSSLLSIPMPVKESSTGLNKIVSKPEVVTSEVTGTTVSASTSSSVPITEGKPSSIPATSG 1403
Query: 75 GLPASHATAAK 43
LP+ +A K
Sbjct: 1404 SLPSIPVSAPK 1414
>02_05_1140 +
34386042-34386302,34386738-34386917,34386999-34387080,
34387180-34387287,34387442-34387630,34387814-34388010
Length = 338
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/52 (38%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +2
Query: 47 AAVAWEAGKPLSIEEIEVD----PPKAGEVRVKITATGVCHTDAYTLSGKDP 190
A V AG P +EE +V PP GEV V ++A GV D G+ P
Sbjct: 3 AVVIARAGGPEVLEERDVGEGLPPPGEGEVLVGVSAAGVNRADTVQRQGRYP 54
>09_04_0031 + 13946692-13946774,13947007-13948012
Length = 362
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +2
Query: 119 EVRVKITATGVCHTDAYTLSGKDPEGVFPVV 211
+V +K+ G+CHTD + + + ++PVV
Sbjct: 34 DVTIKVLYCGICHTDLHIIKNEWGNAMYPVV 64
>06_03_0305 +
19388745-19388963,19389069-19389209,19389799-19389836,
19390161-19390227,19392057-19392467
Length = 291
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 282 VVPGLD*SDSSPTLYTIPPPSCPSTTGNTPS 190
++P S S PT TIPPP PS++ + PS
Sbjct: 15 LLPPSSSSSSPPTPTTIPPPPLPSSSWSPPS 45
>01_05_0179 +
18973795-18973992,18974087-18974276,18974374-18974504,
18974948-18975053,18975661-18975727,18976632-18976698,
18977858-18977947
Length = 282
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = -3
Query: 261 SDSSPTLYTIPPPSCPST-TGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISS 85
S S P PPP+ PST TG SG+ P + +V R + GG +I+
Sbjct: 7 SPSLPDAEAPPPPTSPSTVTGGAVSGTIPAAEAFAVHYPGYPSSPARAAQTLGGLPAIAK 66
Query: 84 MDSGLPAS 61
+ P +
Sbjct: 67 VRGSDPGA 74
>01_06_1309 -
36170947-36171077,36171227-36172198,36172285-36172413,
36172535-36172779,36172904-36173055,36173202-36173306
Length = 577
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1
Query: 302 GTYRGTTWSPGLTEVTPHRHSTRFRRLHVPVLQETLPQ 189
GT+ TT + L P HST ++PVL+ TLPQ
Sbjct: 299 GTFDNTTVAGILEYEDPSSHSTAAFNKNLPVLRPTLPQ 336
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/69 (21%), Positives = 32/69 (46%)
Frame = +2
Query: 5 SAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK 184
+A + G+ + + A ++ LS I +V +KI G+CH+D + + +
Sbjct: 4 TAASAAAGEEQQAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNE 63
Query: 185 DPEGVFPVV 211
++P+V
Sbjct: 64 WKHSIYPLV 72
>10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869
Length = 526
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -3
Query: 231 PPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPASHAT 52
PPPS P+TT PS V A P ++ ++ A GS + ++ + P+SH
Sbjct: 360 PPPSPPATTHPPPSPDLMVQVPAPP-APPTPMMGIGSTVAVQGSVAAAAAAATAPSSHTV 418
Query: 51 A 49
A
Sbjct: 419 A 419
>09_04_0564 + 18565583-18566449,18569662-18570123
Length = 442
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = -3
Query: 240 YTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSP 115
++ PP PS G S SFP A V T A T T+P
Sbjct: 19 FSTPPSPSPSPAGAYSSSSFPFFPTAGVTSTTAATPPTTTAP 60
>01_01_0081 + 623135-623470
Length = 111
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -3
Query: 354 LAQISFRIQAEFTCVALWDVQRYYVVPGLD*SDS--SPTLYTIPPPSCPSTTGNTPSGSF 181
L I A V+LW R VV +D S SP T P P CP+T + F
Sbjct: 4 LRPILLAAAAAVAVVSLWPAAR--VVADIDPSSGMPSPPATTSPFPFCPTTPAGISTQPF 61
Query: 180 P 178
P
Sbjct: 62 P 62
>03_02_0208 +
6420576-6420658,6421640-6421753,6421848-6422379,
6422452-6422605,6422655-6422947
Length = 391
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 119 EVRVKITATGVCHTDAYTLSGKDPEGVFPVV 211
+V VKI G+CH+D T+ + +PVV
Sbjct: 34 DVVVKILFCGICHSDLSTIKNEWGNAKYPVV 64
>01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 368 VERTFWHKLVFGFKQNLHVLHCGTYRGT 285
V + WH+LV G L ++ G+ RGT
Sbjct: 1112 VPSSIWHRLVAGLNAQLRLVRRGSLRGT 1139
>08_02_0950 + 22964817-22964952,22965091-22965493,22966351-22967413
Length = 533
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -2
Query: 604 RNLILVSTLAVFKAAP*PVGTPHPSKQTLSNGPPLQLYREKFLEQLC 464
R+L + + A K P GTP P + +S P L ++++ ++C
Sbjct: 24 RSLQIATAGAAAKKKRRPAGTPDPDAEVVSLSPRTLLESDRYVCEIC 70
>08_02_0538 - 18321101-18321128,18321767-18322587
Length = 282
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 189 GSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDS 76
G F + SV Q P+ ILT+ +P+ + S SS+D+
Sbjct: 222 GQFDYAALVSVSQRPIRDILTKIAPSVIPTDSSSSLDT 259
>08_01_1024 -
10349061-10349200,10349373-10350040,10350478-10350591,
10351956-10352032
Length = 332
Score = 27.9 bits (59), Expect = 8.6
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = +2
Query: 119 EVRVKITATGVCHTDAYTLSGKDPEGVFPVV 211
+V +KI G+CH+D +++ + +P+V
Sbjct: 32 DVVIKILYCGICHSDLHSIKNEWKNATYPLV 62
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,143,569
Number of Sequences: 37544
Number of extensions: 440516
Number of successful extensions: 1474
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1463
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -