Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV021200
(719 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g43940.1 68418.m05376 alcohol dehydrogenase class III / gluta... 105 4e-23
At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical t... 87 1e-17
At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar... 73 1e-13
At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar... 71 6e-13
At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar... 71 6e-13
At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar... 69 4e-12
At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar... 65 5e-11
At4g22110.2 68417.m03197 alcohol dehydrogenase, putative similar... 64 9e-11
At4g22110.1 68417.m03196 alcohol dehydrogenase, putative similar... 64 9e-11
At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar... 61 6e-10
At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar... 59 3e-09
At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogen... 50 2e-06
At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogen... 50 2e-06
At5g61510.1 68418.m07718 NADP-dependent oxidoreductase, putative... 35 0.047
At1g23050.1 68414.m02880 hydroxyproline-rich glycoprotein family... 34 0.11
At4g37970.1 68417.m05366 mannitol dehydrogenase, putative simila... 33 0.19
At5g38560.1 68418.m04662 protein kinase family protein contains ... 31 0.58
At4g39330.1 68417.m05568 mannitol dehydrogenase, putative nearly... 31 0.58
At5g27870.1 68418.m03343 pectinesterase family protein similar t... 29 2.3
At5g16920.1 68418.m01983 expressed protein 29 2.3
At3g19450.1 68416.m02466 cinnamyl-alcohol dehydrogenase (CAD) id... 29 3.1
At1g48620.1 68414.m05439 histone H1/H5 family protein weak simil... 29 3.1
At2g17220.2 68415.m01989 protein kinase, putative similar to pro... 28 5.4
At3g46550.1 68416.m05053 fasciclin-like arabinogalactan family p... 28 7.2
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 28 7.2
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 28 7.2
At2g21890.1 68415.m02601 mannitol dehydrogenase, putative simila... 28 7.2
At2g21730.1 68415.m02585 mannitol dehydrogenase, putative simila... 28 7.2
At2g07760.1 68415.m01004 zinc knuckle (CCHC-type) family protein... 28 7.2
At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putativ... 28 7.2
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 28 7.2
At1g52290.1 68414.m05900 protein kinase family protein contains ... 28 7.2
At1g23580.1 68414.m02968 expressed protein contains Pfam profile... 28 7.2
At1g12050.1 68414.m01391 fumarylacetoacetase, putative similar t... 28 7.2
At4g31370.1 68417.m04448 fasciclin-like arabinogalactan family p... 27 9.5
At4g18600.1 68417.m02755 expressed protein 27 9.5
At3g59290.1 68416.m06609 epsin N-terminal homology (ENTH) domain... 27 9.5
>At5g43940.1 68418.m05376 alcohol dehydrogenase class III /
glutathione-dependent formaldehyde dehydrogenase /
GSH-FDH (ADHIII) identical to gi:1143388
Length = 379
Score = 105 bits (251), Expect = 4e-23
Identities = 55/120 (45%), Positives = 69/120 (57%), Gaps = 1/120 (0%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGV-MPDGTRRFRCKGQEL 429
GVT V+ GDHV+P Y +C CKFC + KTNLC KVRS G G+ M D RF G+ +
Sbjct: 81 GVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPI 140
Query: 430 YHFMGCSTFSQYTVVLEISLCKVAEAVH*IKFVCWDAVYLQVMEPP*ILPKLKPGSNCAI 609
YHFMG STFSQYTVV ++S+ K+ K + K++PGSN AI
Sbjct: 141 YHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAI 200
Score = 100 bits (239), Expect = 1e-21
Identities = 44/67 (65%), Positives = 55/67 (82%)
Frame = +2
Query: 14 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 193
M+T G+VI C AAVA+E KPL IE+++V PP+AGEVR+KI T +CHTDAYT SGKDPE
Sbjct: 1 MATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPE 60
Query: 194 GVFPVVL 214
G+FP +L
Sbjct: 61 GLFPCIL 67
>At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical to
alcohol dehydrogenase GI:469467 from (Arabidopsis
thaliana)
Length = 379
Score = 86.6 bits (205), Expect = 1e-17
Identities = 35/83 (42%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVR-STQGQGVMPDGTRRFRCKGQEL 429
GVT ++PGDHV+P++ +C C+ C + ++N+C +R +T+ G++ DG RF G+ +
Sbjct: 81 GVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTERGGMIHDGESRFSINGKPI 140
Query: 430 YHFMGCSTFSQYTVVLEISLCKV 498
YHF+G STFS+YTVV + K+
Sbjct: 141 YHFLGTSTFSEYTVVHSGQVAKI 163
Score = 85.8 bits (203), Expect = 3e-17
Identities = 38/64 (59%), Positives = 46/64 (71%)
Frame = +2
Query: 14 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPE 193
MST G++I+C AAVAWEAGKPL IEE+EV PP+ EVR+KI T +CHTD Y K
Sbjct: 1 MSTTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQT 60
Query: 194 GVFP 205
+FP
Sbjct: 61 PLFP 64
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAK 581
PLDKVC++ CG+ TG GA LN AK
Sbjct: 168 PLDKVCIVSCGLSTGLGATLNVAK 191
>At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GI:551257 from [Nicotiana tabacum]
Length = 396
Score = 73.3 bits (172), Expect = 1e-13
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Frame = +2
Query: 14 MSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DP 190
M T GKVI C AAVAW AG+PL +E+++VDPP+ EVR++I T +CHTD G+ +
Sbjct: 17 METQGKVITCKAAVAWGAGEPLVMEDVKVDPPQRLEVRIRILFTSICHTDLSAWKGENEA 76
Query: 191 EGVFPVVL 214
+ +P +L
Sbjct: 77 QRAYPRIL 84
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDG-TRRFRCK-GQ 423
GV + GDHV+P++ +C C+ C NLC++ R + VM DG TR F K +
Sbjct: 98 GVEEMMAGDHVLPIFTGECGDCRVCKRDGANLCERFRVDPMKKVMVTDGKTRFFTSKDNK 157
Query: 424 ELYHFMGCSTFSQYTVVLEISLCKV 498
+YHF+ STFS+YTV+ + KV
Sbjct: 158 PIYHFLNTSTFSEYTVIDSACVLKV 182
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVE 587
PL+K+ LL CGV TG GAA N A ++
Sbjct: 187 PLEKISLLSCGVSTGVGAAWNVADIQ 212
Score = 28.3 bits (60), Expect = 5.4
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = +2
Query: 668 NRIIGVDINPDKF 706
++IIG+DINPDKF
Sbjct: 239 SKIIGIDINPDKF 251
>At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 352
Score = 71.3 bits (167), Expect = 6e-13
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQEL 429
GVT + GDHV+ ++ +C +C+ C++ K+N+CQ V + +G+M D RF KG+ +
Sbjct: 55 GVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQ-VLGMERKGLMHSDQKTRFSIKGKPV 113
Query: 430 YHFMGCSTFSQYTVV 474
YH+ S+FS+YTVV
Sbjct: 114 YHYCAVSSFSEYTVV 128
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVE 587
PL K+CLL CGV G GAA N A V+
Sbjct: 141 PLHKICLLSCGVAAGLGAAWNVADVQ 166
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 83 IEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFP 205
+EE+EV PP+ E+R+K+ T +C +D LS + + + P
Sbjct: 1 MEEVEVSPPQPLEIRIKVVCTSLCRSD---LSAWESQSLLP 38
>At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 381
Score = 71.3 bits (167), Expect = 6e-13
Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRFRCKGQEL 429
GVT + GDHV+ ++ +C +C+ C++ K+N+CQ V + +G+M D RF KG+ +
Sbjct: 84 GVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQ-VLGMERKGLMHSDQKTRFSIKGKPV 142
Query: 430 YHFMGCSTFSQYTVV 474
YH+ S+FS+YTVV
Sbjct: 143 YHYCAVSSFSEYTVV 157
Score = 60.9 bits (141), Expect = 8e-10
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +2
Query: 29 KVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFP 205
+VI C AAVAW AG+PL +EE+EV PP+ E+R+K+ T +C +D LS + + + P
Sbjct: 12 QVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSD---LSAWESQSLLP 67
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVE 587
PL K+CLL CGV G GAA N A V+
Sbjct: 170 PLHKICLLSCGVAAGLGAAWNVADVQ 195
>At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 386
Score = 68.5 bits (160), Expect = 4e-12
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Frame = +2
Query: 20 TVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTD-AYTLSGKDPEG 196
T GK I+C AA+ +AG+PL IEEI+VDPP+A EVR+KI T +CHTD + P
Sbjct: 7 TEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSGPLA 66
Query: 197 VFPVVL 214
FP +L
Sbjct: 67 RFPRIL 72
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDG-TRRFR-CKGQEL 429
V K GD V+P++ PQC CK C++PK+N C K + G T RF+ +G+++
Sbjct: 87 VDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDYLSNTRRYGMTSRFKDSRGEDI 146
Query: 430 YHFMGCSTFSQYTVVLEISLCKVAEAV 510
+HF+ S+F++YTVV L K++ +
Sbjct: 147 HHFIFVSSFTEYTVVDIAHLVKISPEI 173
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVE 587
P+D LL C V TG GAA A VE
Sbjct: 174 PVDIAALLSCSVATGLGAAWKVADVE 199
>At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GB:CAA37333 GI:297178 from
[Solanum tuberosum]; contains Pfam zinc-binding
dehydrogenase domain PF00107
Length = 394
Score = 64.9 bits (151), Expect = 5e-11
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = +2
Query: 20 TVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG-KDPEG 196
T GKVI C AAV W PL I+EI VDPP+ EVRVKI + +CHTD +G + E
Sbjct: 4 TQGKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAER 63
Query: 197 VFPVVL 214
FP +L
Sbjct: 64 AFPRIL 69
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Frame = +1
Query: 253 GVTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVM-PDGTRRF------- 408
GV VK GD+V+P + +C CK C ++NLC++ + VM DG RF
Sbjct: 83 GVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPMKRVMVNDGGTRFSTTINKD 142
Query: 409 --RCKGQELYHFMGCSTFSQYTVVLEISLCKV 498
+ Q +YHF+ STF++YTV+ + K+
Sbjct: 143 GGSSQSQPIYHFLNTSTFTEYTVLDSACVVKI 174
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVE 587
PL ++ LL CGV TG GAA N A V+
Sbjct: 179 PLKQMSLLSCGVSTGVGAAWNIANVK 204
>At4g22110.2 68417.m03197 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 389
Score = 64.1 bits (149), Expect = 9e-11
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +2
Query: 26 GKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTD-AYTLSGKDPEGVF 202
GK I+C AAV+ + G+ L IEEI VDPP+A EVR+KI T +CHTD +++ P F
Sbjct: 12 GKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSGPLARF 71
Query: 203 PVVL 214
P +L
Sbjct: 72 PRIL 75
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 256 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDG-TRRFRCK-GQEL 429
V + GD V+P++ P C C+ C + K+N C + G T RF+ G+++
Sbjct: 90 VNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSNTRRYGMTSRFKDSFGEDI 149
Query: 430 YHFMGCSTFSQYTVVLEISLCKVA 501
YHF+ S+FS+YTVV L K++
Sbjct: 150 YHFLFVSSFSEYTVVDIAHLVKIS 173
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVE 587
P+DK LL CGV TG GAA A VE
Sbjct: 177 PVDKAALLSCGVSTGIGAAWKVANVE 202
>At4g22110.1 68417.m03196 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 389
Score = 64.1 bits (149), Expect = 9e-11
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +2
Query: 26 GKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTD-AYTLSGKDPEGVF 202
GK I+C AAV+ + G+ L IEEI VDPP+A EVR+KI T +CHTD +++ P F
Sbjct: 12 GKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSGPLARF 71
Query: 203 PVVL 214
P +L
Sbjct: 72 PRIL 75
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +1
Query: 256 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDG-TRRFRCK-GQEL 429
V + GD V+P++ P C C+ C + K+N C + G T RF+ G+++
Sbjct: 90 VNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSNTRRYGMTSRFKDSFGEDI 149
Query: 430 YHFMGCSTFSQYTVVLEISLCKVA 501
YHF+ S+FS+YTVV L K++
Sbjct: 150 YHFLFVSSFSEYTVVDIAHLVKIS 173
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVE 587
P+DK LL CGV TG GAA A VE
Sbjct: 177 PVDKAALLSCGVSTGIGAAWKVANVE 202
>At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 388
Score = 61.3 bits (142), Expect = 6e-10
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +2
Query: 17 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTD 163
S GK I C AA+ +AG+ L IE+I VDPP+A EVR+KI T +CHTD
Sbjct: 8 SNEGKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTD 56
Score = 55.2 bits (127), Expect = 4e-08
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDG-TRRFR-CKGQEL 429
V K GD V+P++ P C CK C + KTN C + G RF+ G+ +
Sbjct: 89 VDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISNTRRYGMASRFKDSSGEVI 148
Query: 430 YHFMGCSTFSQYTVVLEISLCKVAEAV 510
+HF+ S+FS+YTVV L K++ +
Sbjct: 149 HHFLFVSSFSEYTVVDIAHLVKISPEI 175
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVE 587
P+DK LL CGV TG GAA A VE
Sbjct: 176 PVDKAALLSCGVSTGIGAAWKVANVE 201
>At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 390
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/71 (42%), Positives = 44/71 (61%)
Frame = +2
Query: 2 SSAVMSTVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 181
SS+ + K I+C AAV+ +AG+PL +EEI V PP+ EVR++I T +CH+D
Sbjct: 6 SSSDNKSSHKPIRCKAAVSRKAGEPLVMEEIMVAPPQPFEVRIRIICTALCHSDVTFWKL 65
Query: 182 KDPEGVFPVVL 214
+ P FP +L
Sbjct: 66 QVPPACFPRIL 76
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +1
Query: 256 VTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMP--DGTRRFR-CKGQE 426
V V GD V+P ++P C C C + K+NLC K + MP D + RF G+
Sbjct: 91 VKEVVEGDTVLPTFMPDCGDCVDCKSHKSNLCSKF-PFKVSPWMPRYDNSSRFTDLNGET 149
Query: 427 LYHFMGCSTFSQYTVVLEISLCKVAEAV 510
L+HF+ S+FS+YTV+ ++ K+ ++
Sbjct: 150 LFHFLNVSSFSEYTVLDVANVVKIDSSI 177
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +3
Query: 510 PLDKVCLLGCGVPTGYGAALNTAKVE 587
P + CLL CGV TG GAA TAKVE
Sbjct: 178 PPSRACLLSCGVSTGVGAAWETAKVE 203
>At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 50 AVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDP 190
AV E KPL+IEE + PK+ E+ +K A GVCH+D + + G+ P
Sbjct: 59 AVYREPNKPLTIEEFHIPRPKSNEILIKTKACGVCHSDLHVMKGEIP 105
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +1
Query: 274 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRS-TQGQGVMPDG-TRRFRCKGQELYHFMGC 447
G VV ++ C TC +C +LC+ + + +G + DG TR F +
Sbjct: 138 GSRVVGAFIMPCGTCSYCAKGHDDLCEDFFAYNRAKGTLYDGETRLFLRHDDSPVYMYSM 197
Query: 448 STFSQYTVVLEISLCKVAEAV 510
++Y V L + E++
Sbjct: 198 GGMAEYCVTPAHGLAPLPESL 218
>At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 50 AVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDP 190
AV E KPL+IEE + PK+ E+ +K A GVCH+D + + G+ P
Sbjct: 59 AVYREPNKPLTIEEFHIPRPKSNEILIKTKACGVCHSDLHVMKGEIP 105
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +1
Query: 274 GDHVVPLYVPQCNTCKFCLNPKTNLCQKVRS-TQGQGVMPDG-TRRFRCKGQELYHFMGC 447
G VV ++ C TC +C +LC+ + + +G + DG TR F +
Sbjct: 138 GSRVVGAFIMPCGTCSYCAKGHDDLCEDFFAYNRAKGTLYDGETRLFLRHDDSPVYMYSM 197
Query: 448 STFSQYTVVLEISLCKVAEAV 510
++Y V L + E++
Sbjct: 198 GGMAEYCVTPAHGLAPLPESL 218
>At5g61510.1 68418.m07718 NADP-dependent oxidoreductase, putative
similar to zeta-crystallin homolog TED2 from Zinnia
elegans [gi:531096]; contains Pfam zinc-binding
dehydrogenase domain PF00107
Length = 406
Score = 35.1 bits (77), Expect = 0.047
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +2
Query: 17 STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG 181
S+ K++K + + L E++EV PK GE+RVK A G+ D Y G
Sbjct: 78 SSEKKMVKGIRVYEHGGPEVLKWEDVEVGEPKEGEIRVKNKAIGLNFIDVYFRKG 132
>At1g23050.1 68414.m02880 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 161
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/77 (29%), Positives = 32/77 (41%)
Frame = -3
Query: 285 YVVPGLD*SDSSPTLYTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFG 106
Y P + S+P++ PP P TP+G+ P + PV I SP +G
Sbjct: 37 YPTPPIGGGSSTPSMTQPPPYPPPGVNYPTPAGNLPN------YPPPVGNIPNYPSPPYG 90
Query: 105 GSTSISSMDSGLPASHA 55
G S S G P +A
Sbjct: 91 GGDSSGSSFYGPPPPNA 107
>At4g37970.1 68417.m05366 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 363
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 119 EVRVKITATGVCHTDAYTLSGKDPEGVFPVV 211
EVRVK+ G+CH+D + L + ++P+V
Sbjct: 40 EVRVKVLYCGICHSDLHCLKNEWHSSIYPLV 70
Score = 31.5 bits (68), Expect = 0.58
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 256 VTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGT 399
V+ GD V V V C TC+ C + N C K +T GV DGT
Sbjct: 86 VSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATY-NGVHHDGT 133
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 31.5 bits (68), Expect = 0.58
Identities = 31/88 (35%), Positives = 34/88 (38%), Gaps = 2/88 (2%)
Frame = -3
Query: 276 PGLD*SDSSPTLYTIPPPSCPSTTGNTPS--GSFPESVYASVWQTPVAVILTRTSPAFGG 103
P S +PT PP PS G TPS G P S TP T TSP
Sbjct: 119 PDASPSPPAPTTTNPPPKPSPSPPGETPSPPGETPSPPKPSP-STPTPT--TTTSPPPPP 175
Query: 102 STSISSMDSGLPASHATAAKHLITLPTV 19
+TS S S P +T A LP V
Sbjct: 176 ATSASPPSSN-PTDPSTLAPPPTPLPVV 202
>At4g39330.1 68417.m05568 mannitol dehydrogenase, putative nearly
identical to SP|P42734, probable mannitol dehydrogenase
Length = 360
Score = 31.5 bits (68), Expect = 0.58
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2
Query: 119 EVRVKITATGVCHTDAYTLSGKDPEGVFPVV 211
+V VKI GVCHTD +T+ +PVV
Sbjct: 39 DVTVKILFCGVCHTDLHTIKNDWGYSYYPVV 69
>At5g27870.1 68418.m03343 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Salix gilgiana
GI:6714532, Lycopersicon esculentum SP|Q43143, Phaseolus
vulgaris SP|Q43111; contains Pfam profile PF01095
pectinesterase
Length = 732
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = -3
Query: 261 SDSSPTLYTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSM 82
S S P + P PS+ + PS S P S TP +V+ SP+ S S S
Sbjct: 640 STSPPAGHLGSPSDTPSSLVS-PSTSPPAGHLGSPSDTPSSVVTPSASPSTSPSASPSVS 698
Query: 81 DSGLPASHATAA 46
S P++ +A+
Sbjct: 699 PSAFPSASPSAS 710
Score = 28.7 bits (61), Expect = 4.1
Identities = 25/85 (29%), Positives = 35/85 (41%)
Frame = -3
Query: 261 SDSSPTLYTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSM 82
S S P PP+ PS + PS S P S TP +++ TSP G S S
Sbjct: 618 STSLPAGQLGAPPATPSMVVS-PSTSPPAGHLGSPSDTPSSLVSPSTSPPAGHLGSPSDT 676
Query: 81 DSGLPASHATAAKHLITLPTVDMTA 7
S + A+ + P+V +A
Sbjct: 677 PSSVVTPSASPSTSPSASPSVSPSA 701
Score = 27.5 bits (58), Expect = 9.5
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = -3
Query: 261 SDSSPTLYTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSM 82
S S P + P PS+ + PS S P + TP V+ TSP G S S
Sbjct: 596 STSPPAGHLGSPSDTPSSVVS-PSTSLPAGQLGAPPATPSMVVSPSTSPPAGHLGSPSDT 654
Query: 81 DSGLPA-SHATAAKHL 37
S L + S + A HL
Sbjct: 655 PSSLVSPSTSPPAGHL 670
>At5g16920.1 68418.m01983 expressed protein
Length = 256
Score = 29.5 bits (63), Expect = 2.3
Identities = 36/138 (26%), Positives = 52/138 (37%), Gaps = 6/138 (4%)
Frame = -3
Query: 402 PSAIWHHTLTLS---RTNLL---AQISFRIQAEFTCVALWDVQRYYVVPGLD*SDSSPTL 241
PS++ H+TL +S R+N +I R + + P DS
Sbjct: 119 PSSLPHYTLEISNGGRSNYFLNNVKIISRNICSLGSIKCHGIDGILQSPSTVDDDSPRNN 178
Query: 240 YTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPAS 61
+T+P SCPS+ N+ S S S P LT P S+ IS S P+
Sbjct: 179 HTLPFISCPSSHNNSDQNSHNNSDQNS--SRPADHTLTAPPPV---SSPISQPKSDSPSI 233
Query: 60 HATAAKHLITLPTVDMTA 7
H I +P + A
Sbjct: 234 HDVKMLTSIVIPLFGLLA 251
>At3g19450.1 68416.m02466 cinnamyl-alcohol dehydrogenase (CAD)
identical to SP|P48523 Cinnamyl-alcohol dehydrogenase
(EC 1.1.1.195) (CAD) [Arabidopsis thaliana]
Length = 365
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 50 AVAWEAGKP---LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVFPVV 211
A+ W A P LS + A +V +K+ G+CHTD + + +P+V
Sbjct: 11 ALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLGMSNYPMV 67
>At1g48620.1 68414.m05439 histone H1/H5 family protein weak
similarity to HMG I/Y like protein [Glycine max]
GI:15706274, HMG-I/Y protein HMGa [Triticum aestivum]
GI:20502966; contains Pfam profiles PF00538: linker
histone H1 and H5 family, PF02178: AT hook motif
Length = 479
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = -3
Query: 243 LYTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRT-SPAFGGSTSISSMDSGLP 67
LY PP P T+ P S Y+ + T +A + S S I + +G+P
Sbjct: 53 LYQAAPPQQPQTSPVPPHPSISHPPYSDMICTAIAALNEPDGSSKQAISRYIERIYTGIP 112
Query: 66 ASH-ATAAKHLITLPT 22
+H A HL TL T
Sbjct: 113 TAHGALLTHHLKTLKT 128
>At2g17220.2 68415.m01989 protein kinase, putative similar to
protein kinase APK1A [Arabidopsis thaliana]
Swiss-Prot:Q06548
Length = 413
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 231 PPPSCPSTTGNTPSGSFPES 172
PP + PS+TGN SG+F S
Sbjct: 12 PPTTTPSSTGNISSGTFKSS 31
>At3g46550.1 68416.m05053 fasciclin-like arabinogalactan family
protein similar to fasciclin-like arabinogalactan
protein FLA8 [Arabidopsis thaliana]
gi|10880493|gb|AAG24276
Length = 420
Score = 27.9 bits (59), Expect = 7.2
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = -3
Query: 309 ALWDVQRYYVVPGLD*SDSSPTLYTIPPPSCPSTTGNTPSG-SFPESVYASVWQTPVAVI 133
AL D+ R++V+ SDS L IPP TT SG +F S +V + P +
Sbjct: 88 ALADLLRFHVLLQFL-SDSD--LRRIPPSGSAVTTLYEASGRTFFGSGSVNVTRDPASGS 144
Query: 132 LTRTSPAFGGSTSISSMDSGLPASHATAAKHLITLPTVDMTA 7
+T SPA T + +++ P LI +D+TA
Sbjct: 145 VTIGSPATKNVTVLKLLETKPPNITVLTVDSLIVPTGIDITA 186
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -3
Query: 225 PSCPS--TTGNTPSGSFPESV--YASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPAS 61
PS PS T + PSG + S V TP + I+ +P GGS +D G P +
Sbjct: 120 PSTPSHPTPSHPPSGGYYSSPPPRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPGT 178
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 27.9 bits (59), Expect = 7.2
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Frame = -3
Query: 225 PSCPS--TTGNTPSGSFPESV--YASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPAS 61
PS PS T + PSG + S V TP + I+ +P GGS +D G P +
Sbjct: 120 PSTPSHPTPSHPPSGGYYSSPPPRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPGT 178
>At2g21890.1 68415.m02601 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 375
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 119 EVRVKITATGVCHTDAYTLSGKDPEGVFPVV 211
+V VKI GVCH+D +T+ +P++
Sbjct: 33 DVTVKILFCGVCHSDLHTIKNHWGFSRYPII 63
>At2g21730.1 68415.m02585 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 376
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 119 EVRVKITATGVCHTDAYTLSGKDPEGVFPVV 211
+V VKI GVCH+D +T+ +P++
Sbjct: 33 DVTVKILFCGVCHSDLHTIKNHWGFSRYPII 63
>At2g07760.1 68415.m01004 zinc knuckle (CCHC-type) family protein
contains Pfam domain, PF00098: Zinc knuckle
Length = 530
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 6/88 (6%)
Frame = -3
Query: 252 SPTLYTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSI------ 91
S + ++P P P T T + P S + V + +SP S+S+
Sbjct: 24 SSNVNSVPDPRWPYLTRWTQNSPSPSPSVISPSISLVKPLTIGSSPKIARSSSLDFVNLT 83
Query: 90 SSMDSGLPASHATAAKHLITLPTVDMTA 7
SS+DS LP + +H++++ ++ +A
Sbjct: 84 SSLDSTLPVTVEPPIEHVVSITSLSYSA 111
>At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putative
similar to cinnamyl-alcohol dehydrogenase GB:AAC35846
[Medicago sativa], SP|Q08350 [Picea abies]
Length = 355
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 256 VTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQK 357
V K GDHV V YV C C++C + C K
Sbjct: 83 VQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAK 117
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.9 bits (59), Expect = 7.2
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = -3
Query: 261 SDSSPTLYTIPPPSCPST---TGNTPSGSFPESVYAS--VWQTPVAVILTRTSPAFGGST 97
S SSP+L PP S PS+ + +PS P S+ S P + L+ SP+ S
Sbjct: 30 SSSSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSLSPSLSPSP 89
Query: 96 SISSMDSGLPAS 61
SS S P+S
Sbjct: 90 PSSSPSSAPPSS 101
>At1g52290.1 68414.m05900 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 509
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = -3
Query: 261 SDSSPTLYTIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSIS 88
+D+ P+L + P P PSTT +T + P S + + + +A T+ GGS +++
Sbjct: 3 TDTIPSLSSPPAPEFPSTTPDTATSPAP-SQPSIIGPSSLAPFPETTTNIDGGSRNVA 59
>At1g23580.1 68414.m02968 expressed protein contains Pfam profile
PF02713: Domain of unknown function DUF220
Length = 285
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +2
Query: 59 WEAGKPLSIEEIEVDPPKAGEVRVKITAT-GVCHTDAYTLSGKDPEGVF 202
WE L + P K +VK+T G+CH G P+GVF
Sbjct: 53 WERQDKLWTAAEKKHPWKDAPPKVKVTTKKGICHMHIELTLGLPPDGVF 101
>At1g12050.1 68414.m01391 fumarylacetoacetase, putative similar to
fumarylacetoacetase (Fumarylacetoacetate hydrolase,
Beta-diketonase, FAA)[Rattus norvegicus]
SWISS-PROT:P25093
Length = 421
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +2
Query: 41 CLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTL 175
CL + W KPLS+ + G+ ++T +GVC D Y +
Sbjct: 366 CLLELTWNGQKPLSLNGTTQTFLEDGD---QVTFSGVCKGDGYNV 407
>At4g31370.1 68417.m04448 fasciclin-like arabinogalactan family
protein similar to fasciclin-like
arabinogalactan-protein 1 [Arabidopsis thaliana]
gi|13377776|gb|AAK20857
Length = 278
Score = 27.5 bits (58), Expect = 9.5
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 3/125 (2%)
Frame = -3
Query: 411 AESPSAIWHHTLTLSRTNLLAQISFRIQAEFTCVALWDVQRYYV--VPGLD*SDSSPTLY 238
AE S ++H+ LS + QI+ I A +A++ YV P D+S
Sbjct: 147 AEYVSTVYHNPYNLS----IIQITMPIVAPGLSLAIFPPPPPYVHVAPYPTPMDAS---- 198
Query: 237 TIPPPSCPSTTGNTPSGSFPESVYASVWQTPVAVILTRTSPA-FGGSTSISSMDSGLPAS 61
+P P P+ N+P + P++ A TP A +PA + I + D P+S
Sbjct: 199 VVPAPG-PAADDNSPDSAVPKTPPAPATDTPEA---DSPAPAPSADNEKIEAADKAKPSS 254
Query: 60 HATAA 46
A+ A
Sbjct: 255 SASKA 259
>At4g18600.1 68417.m02755 expressed protein
Length = 1907
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = -3
Query: 204 GNTPSGSFPESVYASVWQTPVAVILTRTSPAFGGSTSISSMD 79
GN+ S ESV +S + T VA I RT + GGS+ +D
Sbjct: 1674 GNSSSTCKFESVPSSSYDTRVAAIEDRTQQSPGGSSFEEQLD 1715
>At3g59290.1 68416.m06609 epsin N-terminal homology (ENTH)
domain-containing protein contains Pfam PF01417: ENTH
domain. ENTH (Epsin N-terminal homology) domain;
similar to Af10-protein - Avena fatua, EMBL:U80041
Length = 1024
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 PPPSCPSTTGNTPSGSFPE---SVYASVWQTPVAVILTRTSPAFGGSTSISSMDSGLPAS 61
PP P + + PS SFP S ++ QTP A ++ F G + ++ G+
Sbjct: 627 PPQYTPGVSSHPPSESFPHQPGSATSASSQTPYATTPNVSAGQFDGGSFMTQQPYGVTQQ 686
Query: 60 HATAAKHL 37
H+
Sbjct: 687 VHVVPSHI 694
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,607,766
Number of Sequences: 28952
Number of extensions: 331703
Number of successful extensions: 1079
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1565336320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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